Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02726 ATGGATGTTCTCATCCTTTCCATTTCTCTTTCACTATTCTCTCTCCTTCTTGCCTTCAACTTTCTTCTTCGACCTCATCGCCAAAACCTTCCTCCAACCCCATTTTTCTGTCTTCCAGTCATTGGTCATCTCCATCTCATCAAACATCCTCTCCATAGAATCCTTCACAACCTCTCCAAAAGCTACGGACATGTCTTCTCTCTTCGATTTGGTTCACGACTCGTAGTAATCATATCGTCCCCTTCCGTCGTCCAAGAATGTTTCACAAAGAACGATATCATTCTCGCAAACCGACCCTTATTAGACACAGGAAAACACTTAGCATATAACCACACCACCATGGCTGTTGCCCCATATGGCGAACACTGGCGAAACCTACGTAGAATCGGTGCGCTCGAGTTATTCTCAACGAGTCGAATAAATCTATTCTCGAGAATGCGAGAGGAAGAAGTTAAAGCGTTGATGGTAAGATTATGCGGGAGTTCGTCGTTGGAAGGGTTCCGGGCAGTGGAGATGGAGAGTATGTTGTTAGATCTGATGTATAATGTTATTATGGGAATGATGGGTGGGAAGAAGGGTTGTGAAGAGGATGAGGGAAAATCTAAGGAATTTAGAGAGATGGTGACGAAGATTATGGCTGTGGGAGGGGCGTCGAATCCGGGAGATTTTATAGCTATTTGGAATTGGATTGATCCGAGCGGGTTGAAGAAGAAGATATTGAAGCTTGGACAAACAATGGATGTTCTTCTTCAAGAATTAGTTGATGGGATGAGAAATGAGAGTGGTGAAGGGAATACTATGATTCATCGTTTACTTCAGTTGCAGAAAATTGAACCGGAGAATCATAGTGATCAAATTATCAAAGGCTTAATACAAATCATATTAATAGCAGGAATCGACACAGCAGCTGTAACTTTAGAATGGGCGCTCTCTCATCTACTAAACAATCCAGATGTGTTAGAAAAAGCAAAAATTGAGATAGACAATGTTGTTGGACAAAAGCGTCTAGTTAATGAAGCTGATTTGCCAAGTTTGACCTATCTACAAGGAATAATTTTTGAGACTCTTCGATTAAGTCCAGCAGCTCCTTTGCTTGTTCCACATTGCTCTTCTGAAGATTGTAAAATTGGAGGCTACGATGTACCTCGTGACACAATTGTAATAATTAATGCTTGGGCTATTCATAGAGACCCCAACCTATGGGAAGATGCCACTAGTTTTAAGCCTGAAAGACATACGAACCCTATTGGAGTCGAGTCATATAAATTCTTACCATTTGGATTGGGAAGGAGAGCTTGCCCTGGTATAGGAATAGCCCAAAGGATGACTAACTTAACTTTGGCAACAATGATTCAATGCTTTGAGTGGAAAAGAGAGGGCTCTTCATTGGTTGACATGAGTGAAGGTGAAGGACTTACTATGCCCAAAGCTCAACCATTGATAGCCAAATGCAAACCACGTCCAATCATGAAGGCTATGTTTAGTGATGAAAGAGAGTTTGATCAAAATATATCTCAAAATGGAATGTAA 1530 41.24 MDVLILSISLSLFSLLLAFNFLLRPHRQNLPPTPFFCLPVIGHLHLIKHPLHRILHNLSKSYGHVFSLRFGSRLVVIISSPSVVQECFTKNDIILANRPLLDTGKHLAYNHTTMAVAPYGEHWRNLRRIGALELFSTSRINLFSRMREEEVKALMVRLCGSSSLEGFRAVEMESMLLDLMYNVIMGMMGGKKGCEEDEGKSKEFREMVTKIMAVGGASNPGDFIAIWNWIDPSGLKKKILKLGQTMDVLLQELVDGMRNESGEGNTMIHRLLQLQKIEPENHSDQIIKGLIQIILIAGIDTAAVTLEWALSHLLNNPDVLEKAKIEIDNVVGQKRLVNEADLPSLTYLQGIIFETLRLSPAAPLLVPHCSSEDCKIGGYDVPRDTIVIINAWAIHRDPNLWEDATSFKPERHTNPIGVESYKFLPFGLGRRACPGIGIAQRMTNLTLATMIQCFEWKREGSSLVDMSEGEGLTMPKAQPLIAKCKPRPIMKAMFSDEREFDQNISQNGM* 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23716685 23720050 + CsaV3_2G035450.1 Csa02g02726 520783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02726 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Csa02g02726 509 Pfam Cytochrome P450 32 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 493 - -
Csa02g02726 509 SUPERFAMILY Cytochrome P450 31 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 493 - -
Csa02g02726 509 Gene3D Cytochrome P450 22 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02726 509 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02712 Csa-Chr2:23623778 Csa02g02726 Csa-Chr2:23716685 0 dispersed
Csa02g02713 Csa-Chr2:23633121 Csa02g02726 Csa-Chr2:23716685 0 dispersed
Csa02g02715 Csa-Chr2:23655113 Csa02g02726 Csa-Chr2:23716685 1.10E-141 dispersed
Csa02g02726 Csa-Chr2:23716685 Csa06g02977 Csa-Chr6:25728642 0 dispersed
Csa02g02725 Csa-Chr2:23708458 Csa02g02726 Csa-Chr2:23716685 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02726 K13260 - csv:101204413 973.77