Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02737 ATGAGACTCCGTGTTTATGGCGAGGAGTTCAATGTTCCGACGATGGTTCTAGAGTTACAGTCTCTGTTCAATGCCACCATGCTCCGGTTTCTTGATTTGTCGGATAATTTAATTTCCAGTGAGGTTCCTGTGCCGGTGGGTAGCCTTGCGAATCTTCAAGTTCTCAACCTTTCCGGAAATGCTCTGTTCGGGAAGTTTCCGAGTGATTTCGTGAATTTGGGGAATCTCACGGTTGTGTCTATGAAGAACAATTACATTTCCGGTGAAATTCCCGGTGGGTTTAAGACAGTGGAGGTTTTGGATCTGTCTTCCAATTTGATTAATGGGTCTTTGCCGGCTGATTTTGGTGGCGATAGTTTACATTACTTCAACATCTCATACAACAAACTTACCGGCCAAATTCCGCCGGATTTCGCCCATAAAATTCCGGCTAACGCCATAATTGATCTCTCCTTCAACAATCTCACCGGTGAAGTCCCTGTTTCTGACGTGTTCATGAATCAAGAAGCAAACTCCTTCACCGGAAACCGTCAACTCTGCGGTGAGTTAACGAAAACCCCATGCCCAATTACTTCATCGCCGTCGTCTCTTCCTCCGGCAATCGCCGCCATTCCGTTAGACCCAAGTACTCCAGAAACAACCTCGCCGGAAAAACAGAGCGAAACAGGGTTTAAACCTTCTACAATCGTTGCCATTGTTTTAGGAGACATCGTCGGATTAGCAATTCTCTGCCTCCTGTTCTTCTACGTCTTCCATTTGAAGAAGAAAAACAAAGCCGTCGAAACCCATTTGAAAAATGAAGTCAATTTAGCAAAAGACAGTTGGTCCACATCCTCATCGGAATCCAGAGGATTTTCCCGATGGTCCTGTTTGAGAAAAACAGGGGATCCAGAAGAGGCAAACTCCGACCAAGCGAGTGTCCTATCATTCTCCGGCCACCATGATACGGCGGAAGAAGGAGGAGAAGCCAACAAAAGAGGAACATTAGTAACAGTTGACGGTGGAGAGAAGGAGCTCGAGCTCGATACTCTCCTAAAAGCATCAGCGTACATTCTCGGCGCCACCGGATCGAGCATTACATACAAGGCGGTGCTCGAAGACGGGACGGCGTTTGCCGTGAGAAGAATCGGAGACGGCGGAGTGGAAAAGTATAAAGATTTCGAGAATCAGATTCGTGGTGTGGCTAAATTAGTTCATCCAAATTTGGTTCGAGTTCGTGGATTTTACTGGGGTGTTGATGAAAAGCTCATTATTTATGATTTTGTTCCGAATGGTAGCCTTGCAAATGCTCGTTACAGGAAAGTGGGCTCTTCGCCTTGTCATCTTCCATGGGAGGCCCGATTGAGGATTGCAAAAGGAGTCGCCCGTGGCCTTTCTTATCTCCACGACAAGAAGCATGTTCATGGCAACTTAAGGCCCACCAACATTCTTTTGGGCTTCGATATGGAGCCTAAGATAGGCGATTTCGGTCTCGAGAAGCTCTTTTTAGGCGATTCCTGCTATAAACCAGGTGGCTCCACTCGAATTTTCGGAAGTAAACGGTCTACTGCTTCTCGAGATAGCTTCCAAGACTATGTCACTGGACCAAGTCCTGGACCTAGCCCGAGCTCGATCAGTGGGGTGTCACCATACTTGGCACCAGAGTCACTTCGAAGCCTGAAGCCAAATTCGAAATGGGATGTGTATTCATTTGGTGTGATATTGCTTGAACTACTAACAGGAAAGATCATAGTGTTGGATGAGTTAGGGCAAGGGCTTGGTCTTGCTATGGAAGACAAGAGTCGAACACTAAGAATGGCTGACATGGCGATTAGAGCTGATGTGGAGGGAAGAGAAGAAGCATTGTTATCTTGCTTTAAATTAGGATATAGTTGTGCATCTCCTGCCCCACAAAAGAGACCATCCATGAAAGAAGCATTGCAAGTTTTGGAGAAATTTCCAACCCTATCGGTGTCATCACACTATTATGTTCTCTAG 1977 46.28 MRLRVYGEEFNVPTMVLELQSLFNATMLRFLDLSDNLISSEVPVPVGSLANLQVLNLSGNALFGKFPSDFVNLGNLTVVSMKNNYISGEIPGGFKTVEVLDLSSNLINGSLPADFGGDSLHYFNISYNKLTGQIPPDFAHKIPANAIIDLSFNNLTGEVPVSDVFMNQEANSFTGNRQLCGELTKTPCPITSSPSSLPPAIAAIPLDPSTPETTSPEKQSETGFKPSTIVAIVLGDIVGLAILCLLFFYVFHLKKKNKAVETHLKNEVNLAKDSWSTSSSESRGFSRWSCLRKTGDPEEANSDQASVLSFSGHHDTAEEGGEANKRGTLVTVDGGEKELELDTLLKASAYILGATGSSITYKAVLEDGTAFAVRRIGDGGVEKYKDFENQIRGVAKLVHPNLVRVRGFYWGVDEKLIIYDFVPNGSLANARYRKVGSSPCHLPWEARLRIAKGVARGLSYLHDKKHVHGNLRPTNILLGFDMEPKIGDFGLEKLFLGDSCYKPGGSTRIFGSKRSTASRDSFQDYVTGPSPGPSPSSISGVSPYLAPESLRSLKPNSKWDVYSFGVILLELLTGKIIVLDELGQGLGLAMEDKSRTLRMADMAIRADVEGREEALLSCFKLGYSCASPAPQKRPSMKEALQVLEKFPTLSVSSHYYVL* 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23851434 23854997 + CsaV3_2G035560.1 Csa02g02737 520794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02737 658 Pfam Protein kinase domain 352 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g02737 658 SUPERFAMILY Protein kinase-like (PK-like) 351 644 IPR011009 -
Csa02g02737 658 SUPERFAMILY L domain-like 20 181 - -
Csa02g02737 658 PANTHER BNAC07G16060D PROTEIN 21 648 - -
Csa02g02737 658 Gene3D Ribonuclease Inhibitor 13 195 IPR032675 -
Csa02g02737 658 Gene3D Transferase(Phosphotransferase) domain 1 422 653 - -
Csa02g02737 658 Gene3D Phosphorylase Kinase; domain 1 321 421 - -
Csa02g02737 658 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 648 - -
Csa02g02737 658 Pfam Leucine Rich repeats (2 copies) 26 66 IPR025875 -
Csa02g02737 658 ProSiteProfiles Protein kinase domain profile. 346 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02737 Csa-Chr2:23851434 Csa03g01823 Csa-Chr3:13971854 0 dispersed
Csa02g02737 Csa-Chr2:23851434 Csa05g02059 Csa-Chr5:23897339 8.15E-120 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77937 PF00069 Pkinase 1.10E-28 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02737 - - csv:101210227 1207.2