Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02790 ATGATATCCCTAGCCCCTCTCTGCGACCCCCAGCAACCCAATAATGTCTCCTCCTCTCCCCCTCCCTCCACTCCTCCCACCCATGTTTTCCGATCCAAATTACCCGACATTCCTATCCCCGACCATCTCCCTCTTCACACTTACTCCTTCCAGAAACTCTCCCAAGTTTCCGACCGCCCATGTTTGATCGTCGGCTCCACCGGAAAATCCTATTCCTACTCCGAAACCCACCTCCTTTCCCGCAAAGCCGCCGCCACTTTCTCCAAACTTGGTGTTAAGAGAGGGGATGTTATTATGATTCTCCTCCATAATTCTCCTGAATTTATTTTCTCTTTTATGGGTTCCTCCATGCTCGGCGCCGTCGCTACCACCGCCAATCCTTACTACACGGGGGCGGAGATTTCTAGGCAGCTGAAGGCCTCCGGTGCTAAGTTCGTTGTTACTTACTCCCGATGCGTTGATAAGTTACGAGAATCATGTGGTGATGTTCTCACTATTGTCACCATCGATGCCCCGCCGGAGAATTGTCTGAGCTTCTCGATGGTTTACGACGCCGATGAGAACGATGTTCCGTCTGTCGAGATTGATACGAACGATGCCGTTGCTCTGCCGTTCTCCTCCGGGACGACCGGCCTCCCCAAGGGTGTGATTTTGACTCATAAGAACATGGTGTCGAGTGTGGCTCAACAGGTTGATGGAGAAAATCCGAACCTATATTTAAAAAGAAACGACGTAGTTTTATGCGTGTTACCAATGTTTCATATATTCTCATTGAGTAGCATAGTTTTGATATCGATGAGATCAGGGGCAGCGTTGCTTTTGATCGAGAAATTCGAGATCGAGTCATTGCTACGACTAGTAGAGAGACACAAGGTGACGGTGGCAACGGTGGTGCCACCTCTCGTGGTGTCGCTAGTAAAGAACCCGAAGGTTGCAGATTTTGACTTGAGCTCGATTCGATTAGTGCTTTCCGGAGCCGCACCCTTGCGAAAGGAGCTGGAGGAGGCTCTCATGGAAAGGCTTCCTCAAGCCATTTTTGGTCAGGGCTATGGTATGACGGAAGCGGGTCCAGTGCTGAGCATGTGCTCGGCTTTTGCAAAGGAGCCACCGATGCCAACAAAATCTGGCTCCTGCGGCCGCGTTGTTAGAAACTCGGAGCTTAAAGTTGTTGATCCAATAACTGGTGCCTCACTTACTTATAATCAACCCGGAGAGATTTGTGTTCGAGGTCCCCAAGTTATGAAAGGTTATTTGAATGACCCGGTGTCCACATCATTGACTGTCGACGTGGAGGGTTGGCTTCATACGGGTGATATTGGATTCGTTGACGACGAAGAAGAAATTTTTATAGTTGATAGAGTCAAAGAGATTATTAAATTTAAAGGTTTCCAGGTGGCACCAGCAGAGTTAGAGGCCCTTCTCGTAACCCATACATCTATTGTTGATGCTGCTGTTGTACCGCAAAACGACGATGTTGCTGGTGAAGTTCCCGTAGCTTTCATAGTTCCATCAACTCATAATGAACTTTCTGAGGAATCAGTAAAAGAATTCATAGCAAAGCAGGTTGTGTTCTACAAGAGATTGCACAAAGTATATTTTGTGAAAACAATTCCAAAATCACCTTCTGGAAAGATCTTGAGAAAGGAACTCAAAGCCAAACTCTCAATCACATAA 1674 47.43 MISLAPLCDPQQPNNVSSSPPPSTPPTHVFRSKLPDIPIPDHLPLHTYSFQKLSQVSDRPCLIVGSTGKSYSYSETHLLSRKAAATFSKLGVKRGDVIMILLHNSPEFIFSFMGSSMLGAVATTANPYYTGAEISRQLKASGAKFVVTYSRCVDKLRESCGDVLTIVTIDAPPENCLSFSMVYDADENDVPSVEIDTNDAVALPFSSGTTGLPKGVILTHKNMVSSVAQQVDGENPNLYLKRNDVVLCVLPMFHIFSLSSIVLISMRSGAALLLIEKFEIESLLRLVERHKVTVATVVPPLVVSLVKNPKVADFDLSSIRLVLSGAAPLRKELEEALMERLPQAIFGQGYGMTEAGPVLSMCSAFAKEPPMPTKSGSCGRVVRNSELKVVDPITGASLTYNQPGEICVRGPQVMKGYLNDPVSTSLTVDVEGWLHTGDIGFVDDEEEIFIVDRVKEIIKFKGFQVAPAELEALLVTHTSIVDAAVVPQNDDVAGEVPVAFIVPSTHNELSEESVKEFIAKQVVFYKRLHKVYFVKTIPKSPSGKILRKELKAKLSIT* 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24252651 24257765 - CsaV3_2G036090.1 Csa02g02790 520847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02790 557 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
Csa02g02790 557 PANTHER 4-COUMARATE--COA LIGASE 3 28 553 - -
Csa02g02790 557 Pfam AMP-binding enzyme 55 460 IPR000873 -
Csa02g02790 557 Gene3D - 24 454 IPR042099 -
Csa02g02790 557 Gene3D - 455 555 IPR045851 -
Csa02g02790 557 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 553 - -
Csa02g02790 557 CDD 4CL 39 550 - -
Csa02g02790 557 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Csa02g02790 557 MobiDBLite consensus disorder prediction 1 28 - -
Csa02g02790 557 SUPERFAMILY Acetyl-CoA synthetase-like 36 553 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02790 Csa-Chr2:24252651 Csa07g02072 Csa-Chr7:20015822 0 dispersed
Csa02g02790 Csa-Chr2:24252651 Csa02g00587 Csa-Chr2:4235452 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02790 K01904 - csv:101221344 1040.02