Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02791 ATGGACACTCTCTTTGTCCCTATTACCTTCTCCGAACTTCCTCACCCTTTACTCACCTGCAACACCAACGCCGCCTCTCAATCGAGGGTTGGACCTGTTTCTCGCTTCTCGCCGCTTTCTTCTCTAATTCACCTCAATCGCTTTCCCACTCGCTTTAAGAAGCTTTCCTATCCTCGCTTCGGTCACTTCCGTTGCGCCGCCGAGGCCTCCGGTCACCGACACGGTCACCATCACGGCCATCATCACCACCACCATGGCTGCCAGCACCATTGCAGTGGTGACAGTGATGGTGTGGAGCTGACTGGGGCTCAGAAGGCGTTCGTTCGATTTGCCGAAGCTATTAGATGGACGGACTTGGCGAATTATTTGAGGGAGCATCTACATATGTGTTGCGGTTCTGCTGCTTTGTTTGTGACTGCGGCTGCTTTTCCTTATTTAGTGCCTAAACCCGCTGTGAAGCCTTTACAGAATGTTTTCATTGCTGTTGCTTTCCCATTAGTCGGGGTCTCTGCTTCTCTTGATGCTCTTACTGATATTAGTGGTGGAAAAGTAAACATCCATGTACTAATGGCTCTTGCAGCCTTTGCATCAATATTTATGGGGAACCCCTTGGAAGGAGGACTACTTCTTGTGATGTTTAATATGGCTCATATCGCTGAAGAGTATTTCACAAAGCAATCAATGATTGATGTTAAAGAGTTGAAGGAAAGTCATCCAGATTTTGCTCTTGTTCTTGATGTGAATGATGATAACCTTCCCGATACTTCAGATCTGGAGCATAGAAGGGTGCCAGTGCGTGATGTTAAAGTGGGCTCATATATCTTGGTGGGAGCTGGTGAGTCTGTCCCTGTAGATTGTGAAGTTTATCAAGGCTGTGCCACAATCACTGTCGAGCACTTGACAGGAGAAGTCAGACCATTGCAAATTAAGGTTGGGGAAAGAGTTCCAGGTGGAGCAAGAAACTTGGACGGTAGGATCATAGTGAAGGCTACAAAAACATGGGAAGAGTCAACACTTAGCAGGATTGTGCAGTTGACTGAAGAAGCACAACTTAATAAACCAAAGCTACAGAGGTGGCTTGATGAATTTGGTGAGAATTACAGCAAGGTTGTTGTAGTTTTATCTGTAGCTGTTGCCCTCATTGGTCCATTATTGTTCAAGTGGCCATTTATATGCACACCAGGTTTCAGAGGATCAGTTTATAGAGCACTCGGGCTTATGGTAGCCGCATCACCATGTGCACTGGCAGCAGCGCCATTGGCATATGCTATTGCGATAAGCTCCTGCGCAAGAAAGGGGATACTCCTGAAAGGTGGACACGTGCTTGATGCTATGGCTTCTTGTCATACTGTTGCATTTGATAAAACCGGAACATTGACTACAGGAGGACTTGTGTTTAAAGCCATAGAACCTATTTATGGGCATAAGATTGGAGGCGATAAATCACAGTTTGCTTCCTGTTGCATACCAAGCTGCGAGAAAGAAGCCCTTGCAGTGGCAGCTGCCATGGAAAAGGGTACTACTCACCCAATTGGAAGAGCTGTAGTAGATCATAGTGTGGGGAAAGACCTTCCTTCTATTTCTGTTGAAAGTACCGAATATTTCCCTGGAAGAGGTCTCATAGCAACTCTGCATGGCATTAAGTCAGGAATTGGAGGTAAATTGCGGAAAGCGTCTCTTGGTTCTGTAGATTTCATCACTTCCTTCTGCAAATCCGAAAATGAATCAAGGATGATCAAGGACGCTGTTAGAGCATCAACATATGGAAGTGAATTTGTTCATGCTGCTCTTTCAGTTGATCAAAAGGTAACACTGATTCACCTTGAGGATCAACCTCGACCTGGAGTCATAGATGCAATAGCAGAACTACAACATCTGGGAAAACTTCGAGTTATGATGTTAACAGGTGATCATGATTCAAGTGCATGGAAAGTTGCAAATGCTGTGGGCATAAATGAAGTTTACTACAGTCTTAAGCCAGAGGACAAACTTGCTCACGTGAAGGAAATTTCAAGGGAAATGGGGGGTGGCTTGATCATGGTAGGCGAAGGGATAAACGATGCACCTGCACTTGCTGCTGCTACTGTGGGTATAGTTCTTGCTCATCGCGCAAGTGCCACTGCTACAGCTGTCGCAGATGTCCTACTTCTTCAGGACAGTATTTCTGGTGTACCTTTTTGCATTGCAAAATCTCGTCAGACCACTTCACTGATCAAGCAAAACGTGACCCTTGCCTTGACATCTATCCTTCTAGCGTCTCTCCCATCCGTTTTGGGGTTTCTTCCCTTGTGGCTAACGGTCCTTCTACACGAGGGTGGCACTCTCCTTGTTTGCCTGAACTCAGTACGTGCTCTAAATCACCCCTCATGGTCATGGAAACAAGATCTTCAAAACCTGATACACGATGCCAGATCTAAACTTAACACGACACCCGAAAATAGCTCTGGGACCATCCAAACTGCAACTTCATAG 2472 45.91 MDTLFVPITFSELPHPLLTCNTNAASQSRVGPVSRFSPLSSLIHLNRFPTRFKKLSYPRFGHFRCAAEASGHRHGHHHGHHHHHHGCQHHCSGDSDGVELTGAQKAFVRFAEAIRWTDLANYLREHLHMCCGSAALFVTAAAFPYLVPKPAVKPLQNVFIAVAFPLVGVSASLDALTDISGGKVNIHVLMALAAFASIFMGNPLEGGLLLVMFNMAHIAEEYFTKQSMIDVKELKESHPDFALVLDVNDDNLPDTSDLEHRRVPVRDVKVGSYILVGAGESVPVDCEVYQGCATITVEHLTGEVRPLQIKVGERVPGGARNLDGRIIVKATKTWEESTLSRIVQLTEEAQLNKPKLQRWLDEFGENYSKVVVVLSVAVALIGPLLFKWPFICTPGFRGSVYRALGLMVAASPCALAAAPLAYAIAISSCARKGILLKGGHVLDAMASCHTVAFDKTGTLTTGGLVFKAIEPIYGHKIGGDKSQFASCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSVGKDLPSISVESTEYFPGRGLIATLHGIKSGIGGKLRKASLGSVDFITSFCKSENESRMIKDAVRASTYGSEFVHAALSVDQKVTLIHLEDQPRPGVIDAIAELQHLGKLRVMMLTGDHDSSAWKVANAVGINEVYYSLKPEDKLAHVKEISREMGGGLIMVGEGINDAPALAAATVGIVLAHRASATATAVADVLLLQDSISGVPFCIAKSRQTTSLIKQNVTLALTSILLASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNHPSWSWKQDLQNLIHDARSKLNTTPENSSGTIQTATS* 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24267123 24277826 - CsaV3_2G036100.1 Csa02g02791 520848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02791 823 Gene3D - 225 350 - -
Csa02g02791 823 Gene3D - 445 732 IPR023214 -
Csa02g02791 823 PRINTS P-type cation-transporting ATPase superfamily signature 452 466 - -
Csa02g02791 823 PRINTS P-type cation-transporting ATPase superfamily signature 604 615 - -
Csa02g02791 823 PRINTS P-type cation-transporting ATPase superfamily signature 627 637 - -
Csa02g02791 823 PRINTS P-type cation-transporting ATPase superfamily signature 681 700 - -
Csa02g02791 823 PRINTS P-type cation-transporting ATPase superfamily signature 705 717 - -
Csa02g02791 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 586 761 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Csa02g02791 823 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 261 473 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Csa02g02791 823 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 186 783 IPR027256 GO:0006812|GO:0016021|GO:0019829
Csa02g02791 823 SFLD p-type atpase 434 734 IPR044492 -
Csa02g02791 823 SFLD C1.7: P-type atpase like 434 734 - -
Csa02g02791 823 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 53 819 - -
Csa02g02791 823 ProSitePatterns E1-E2 ATPases phosphorylation site. 454 460 IPR018303 -
Csa02g02791 823 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 493 589 IPR023299 GO:0000166
Csa02g02791 823 Gene3D - 463 612 IPR023299 GO:0000166
Csa02g02791 823 Pfam haloacid dehalogenase-like hydrolase 450 694 - -
Csa02g02791 823 Pfam E1-E2 ATPase 259 432 - -
Csa02g02791 823 SUPERFAMILY Calcium ATPase, transmembrane domain M 188 765 IPR023298 -
Csa02g02791 823 SUPERFAMILY Calcium ATPase, transduction domain A 260 345 IPR008250 -
Csa02g02791 823 SUPERFAMILY HAD-like 450 781 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02791 Csa-Chr2:24267123 Csa04g02581 Csa-Chr4:25345754 9.00E-56 dispersed
Csa02g02791 Csa-Chr2:24267123 Csa01g02172 Csa-Chr1:18849770 1.69E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02791 K01534 - csv:101221102 1541.55