Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02809 ATGGAGATATGGTTCATCTTCATAATCTCCCTCTCCCTCTGCTCTCTTCTCACTTCCATTTTTACCCATTTCCAAACCTCCACAAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATTTCCTATGGCTCCGCAGATCCTCCCTCCAAATCGAGTCTCTTCTCCGGAGTTTCGTCGCTAAATATGGTCCTGTTCTCACCCTCCGCATCGGCTCCAGGCCCACTGTCTTCATCGCCGACCGTTCAATTGCCCACAAAATCCTCGTCCAAAACGGTGCTCTCTTTGCTGACCGTCCACCGGCCCTATCCGTTAGCAAAGTCGTGACTTCCAACCAACACAACATTAGCTCTGCTTCTTACGGCCCACTTTGGCGCCTCCTCCGCCGCAATCTCACTTCTCAAATTCTTCATCCTTCTCGTGTCAGATCCTATAGTGAAGCTCGCAAGTGGGTTTTGGATATTCTTCTCAATCGTCTTCAGTCTCAGTCTGAATCTGGAAACCCTGTCTCAGTCGTTGAGAATTTTCAGTATGCCATGTTTTGTTTGTTGGTATTGATGTGTTTCGGGGATAAGCTTGAGGAATCCCAGATTCGCGAAGTCGAGAACGTGGAGCGACAACTTATATTGTGTTTTCAGCGTTTTAACATTCTCAATTTCTGGCCTAAAGTCACAAAGATTTTGTTTCGGAAACGCTGGGAGGCGTTTTTCCAACTAAGAAAGAACCAAGAGAAGGTCCTAACTCGTTTGATCGATGCCCGAAGGAAGGCCAATGAAAACAGGGCCCAAAACGAAGAAGAAGAAATAGTGGTGTCATATGTTGATACGTTGCTTGAATTGGAGCTCCCTGACGAGAAGAGAAAGCTTAATGATGACGAATTAGTTACTTTATGCTCTGAATTCCTCAACGCCGGCACCGATACAACGTCCACAGCCTTGCAGTGGATAATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGTAGAGATGAAAGGAGTAATGGGAAATGGATCAAGGGAGGAAGTGAAGGAAGAGGTTTTGGGGAAACTTCCATATTTGAAAGCTGTGGTTTTGGAAGGATTAAGAAAACACCCACCAGCGCATTTCGTGCTACCACATGCGGTGAAAGAAGATACAGAGTTGGGAAATTATGTGATACCAAAGAATGCGTCCGTAAATTTCATGGTGGCGGAAATGGGTCGAGATCCGAAAGTGTGGGAAGATCCGACGGCGTTTAATCCAGAGAGGTTCATGAAGGGCGGGAAAGAAAAAGAAGAACAAGTAGCAGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGGATATGCCCTGGATTTGGTTTGGCGATTCTTCATTTGGAGTATTTTGTTGCTAATTTGGTATGGCGGTTCGAATGGAAGGTCGTTGATGGAGACGAAGTTGACATGTCGGAGAAGGTAGAGCTCACCGTTGCCATGAAGAAGCCTCTGAAAGCTAAAATCCATCCAAGGATCCATACTGAGAGCTGA 1548 45.99 MEIWFIFIISLSLCSLLTSIFTHFQTSTKLPPGPPSIPILTNFLWLRRSSLQIESLLRSFVAKYGPVLTLRIGSRPTVFIADRSIAHKILVQNGALFADRPPALSVSKVVTSNQHNISSASYGPLWRLLRRNLTSQILHPSRVRSYSEARKWVLDILLNRLQSQSESGNPVSVVENFQYAMFCLLVLMCFGDKLEESQIREVENVERQLILCFQRFNILNFWPKVTKILFRKRWEAFFQLRKNQEKVLTRLIDARRKANENRAQNEEEEIVVSYVDTLLELELPDEKRKLNDDELVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLFVEMKGVMGNGSREEVKEEVLGKLPYLKAVVLEGLRKHPPAHFVLPHAVKEDTELGNYVIPKNASVNFMVAEMGRDPKVWEDPTAFNPERFMKGGKEKEEQVAEFDITGSKEIKMMPFGAGRRICPGFGLAILHLEYFVANLVWRFEWKVVDGDEVDMSEKVELTVAMKKPLKAKIHPRIHTES* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24469512 24471059 + CsaV3_2G036280.1 Csa02g02809 520866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02809 515 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 Pfam Cytochrome P450 31 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Csa02g02809 515 SUPERFAMILY Cytochrome P450 31 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 Coils Coil 241 268 - -
Csa02g02809 515 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 508 - -
Csa02g02809 515 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02809 515 PANTHER CYTOCHROME P450 4 508 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02809 Csa-Chr2:24469512 Csa02g02811 Csa-Chr2:24477812 0 dispersed
Csa02g02809 Csa-Chr2:24469512 Csa02g02810 Csa-Chr2:24474600 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02809 K24184 - csv:101220777 1000.73