Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g02810 | ATGGAGAATTGGTTCATCGTCCTCGTCTCCTTCTCCATCTGCTCTCTTCTCACCTCCATTTTCACCCTTCTCCGTACCTCCTCCAAGCTTCCACCAGGCCCTCCTTCAATCCCCATCCTCACCAATTTCCAGTGGCTCCGCAAATCCACCCTCCAAATCGAGTCTCTACTTCGTAGTTTCGTCGCAAAATATGGCCCCATCATCACCCTCCCCATCGGCACCCGCCCCGTCATCTTCATCGCCGACCCCTCCATCGCCCACAAGGCCCTCGTCCTCAACGGCGCCCTCTTCGCCGATCGTCCACCGGCGCTACCTGTTGCCAAGATCATTACCTCCAACCAACACAACATTAACTCTGCCTCTTACGGCCCACTCTGGCGCCTCCTCCGCCGTAATCTCACTTCCCAAATCCTCCATCCTTCCCGTCTCAAATCCTACAGTGAAGCTCGCAAGTGGGTTTTGGATGTCCTTATTAATCGGTTTGTTTCTCAGTCTGAATCGGGAAATCCCGTTTGTGTTATTGAACATTTTCAGCATGCTATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAGCTTGAGGAGTCCCTGATCAAGGAAATTGAAGACGTGCATCGAGTTTTGCTTTTGAATTTTCAACGTTTTAGCAATCTTGATTTGTTGCCTAAATTGTCCAAGATTTTCTTCCGAAAACGTTGGGAGGCATTTCTTGAAATCAGAAGAAAGCAAGATAAAGTCGTCATCCCATTGATTGAATCAAGAAGAACAGCCATCCAAAACAGAGCAAGCAGTGCCAAAAATGAAGACAAAGAAGGTTTTGTGTTTTCATATGTGGACACACTGCTTGATTTAAAGCTCCCTGAAGAGGACAATAGAAAGCTCACTGATGAGGAGATGGTCACCCTGTGCTCGGAGTTCCTCTCCGGCGGCACCGACACAACTGCCACGGCGCTGCAATGGATAATGGCAAATTTAGTGAAGAACCCAGAAATCCAGAATAAGCTTTTGTCAGAAATGAAAGGAGTGATGGGAGATGGATCAAGGGAGGAGGTAAAGGAAGAGGATTTGGAGAAACTACCATATCTGAAAGCTATGATTTTAGAGGGATTAAGAAGACACCCACCAGGGCATTTCTTGTTGCCACACGCAGTGAAAGAAGACACCATATTGGAAAATTATGTGATACCAAAGAATGGTATAGTAAATTTCATGGTGGCGGAGATAGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAAGGCAACGAAGGAGAAGGAGTTGAGTTTGATATAACAGGAAGCAAAGAGATAAAGATGATGCCTTTCGGAGCAGGGAGAAGGATGTGTCCTGGATTAGGCCTTGCAATTCTTCATTTGGAGTACTTCATTGCAAATTTGGTATGGAGATTTGAGTGGAAGGAAGTAAAGGGAGAGGAAGTTAGTCTTTTGGAGAAGGTAGAGTTCACAGTGGTGATGGAGAAGCCTCTTAAAGCCAACATTATTCCAAGGTGA | 1539 | 46.33 | MENWFIVLVSFSICSLLTSIFTLLRTSSKLPPGPPSIPILTNFQWLRKSTLQIESLLRSFVAKYGPIITLPIGTRPVIFIADPSIAHKALVLNGALFADRPPALPVAKIITSNQHNINSASYGPLWRLLRRNLTSQILHPSRLKSYSEARKWVLDVLINRFVSQSESGNPVCVIEHFQHAMFCLLVLMCFGDKLEESLIKEIEDVHRVLLLNFQRFSNLDLLPKLSKIFFRKRWEAFLEIRRKQDKVVIPLIESRRTAIQNRASSAKNEDKEGFVFSYVDTLLDLKLPEEDNRKLTDEEMVTLCSEFLSGGTDTTATALQWIMANLVKNPEIQNKLLSEMKGVMGDGSREEVKEEDLEKLPYLKAMILEGLRRHPPGHFLLPHAVKEDTILENYVIPKNGIVNFMVAEIGWDPKVWEDPMAFKPERFMKGNEGEGVEFDITGSKEIKMMPFGAGRRMCPGLGLAILHLEYFIANLVWRFEWKEVKGEEVSLLEKVEFTVVMEKPLKANIIPR* | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24474600 | 24476754 | + | CsaV3_2G036290.1 | Csa02g02810 | 520867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g02810 | 512 | Gene3D | Cytochrome P450 | 24 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 510 | - | - | |
Csa02g02810 | 512 | Pfam | Cytochrome P450 | 31 | 500 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | PANTHER | CYTOCHROME P450 | 4 | 510 | - | - | |
Csa02g02810 | 512 | SUPERFAMILY | Cytochrome P450 | 31 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02810 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02777 | Csa-Chr2:24167259 | Csa02g02810 | Csa-Chr2:24474600 | 5.30E-153 | dispersed | |
Csa02g02810 | Csa-Chr2:24474600 | Csa02g02817 | Csa-Chr2:24509116 | 0 | dispersed | |
Csa02g02809 | Csa-Chr2:24469512 | Csa02g02810 | Csa-Chr2:24474600 | 0 | tandem | |
Csa02g02810 | Csa-Chr2:24474600 | Csa02g02811 | Csa-Chr2:24477812 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g02810 | K24184 | - | csv:101221011 | 1025.0 |