Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02811 ATGGAGATTTGGTTCGTCATCCTCGTTTCCCTCTGCATCTCCTCTCTTCTCACCTCCATTTTTACCCATTTTCGAACCTCCTCCAACCTTCCACCGGGCCCTCCTTCAATTCCCATCTTCACTAATTTTCAATGGCTCCGCAGATCCCCTCTCCAAATTGAATCTCTTCTTCGCAGTTTCGTCACCAAATATGGCCCTGTCGTCACCCTCCCTATTGGCAACCACCCCGTCGTCTTCATTGCCGACCGCTCCATTGCTCATAAAGCTCTTTTCAAACACGGCGCTCTCTTCGCCGACCGTCCTCCGGCACCTCCCTTGAGCAAGGTCATCTCTTCCAATCAATACAGCATTAGCTCTGCATCTTACGGTCCACTCTGGCGCCTCCTCCGTCGCAATCTCACTTCCCAAATCCTCCATTCTTCTCGTATCGTATTCTACAGCCAAGCTCGCAGGTGGGTTTTGGATATTCTTCTCAGTCGCCTTCAATCTCACTCACAATCTAAAATACCCGTCTTAGTCGTCGAGAATTTTCAATATGCCATGTTTTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAGCTTGAGGAGTCCCAGATTCGTGAAGTCGAGAAAGTAGAGCGAGAGCTTATATTGAGTTTTCAGCGTTTCAACATTTTCAATTTCTGGCCTAAATTCACAAAGATTTTGCTCAGAAAACGTTGGGAGGCCTTTCTCCAAATAAGAAAAAACCAAGAGAATGTCCTAAATCGTTTGATCGAAGAACGAAGGAAGGCCAATAAAAACAGGGCCAACAAAGCTCAAAATGAAGAAAAAGAAGAATTTGTGGTGTCATATGTGGACACATTGCTCGATTTGGAGCTCCCCAATGAGGACAATAGAAAGCTTTCTAATGAGGAAATAGTCACCCTATGCTCAGAGTTCCTCAACGCAGGCACGGATACCACCTCAACAGCACTGCAATGGATAATGGCGAATATAGTGAAAAACTCAAAAATCCAGAACAAACTCTTGGCAGAAATTAGAGGAGTAATGGGAAATGGATCAACAGAGGATGAGGTGAAGGAAGAGGATTTGGAGAAACTTCCATATCTAAAAGCAGTGGTTTTAGAAGGATTAAGACGACACCCACCAGGGCATTTCGTGTTACCACATGCAGTGAAAGAAGACACGATATTGGAAAACTATGTGATACCAAAGAATGGGACAGTAAATTTCATGGTGGCGGAGATGGGGTTGGATCCAAAAGTGTGGGAAGATCCAATGGTATTTAAGCCGGAGAGGTTCTTGAAAGGCGGTGAAGGAGAAGGAGCTGTGTTTGATATAACAGGAAGCAAAGAGATAAAAATGATGCCGTTCGGAGCAGGAAGAAGGATGTGTCCTGGATTTGTTCTGGCGATTCTCCATTTGGAGTACTTCATTGCAAATTTGGTATGGAGGTTTGAATGGAAGGAAGTAAAGGGAGATGAAGTTAGTTTGGGAGAGAAAATAGAGTTCACAGTGGTGATGGAAAAACCTTTGAAAGCTGACATAATTCCTAGGTGA 1542 44.36 MEIWFVILVSLCISSLLTSIFTHFRTSSNLPPGPPSIPIFTNFQWLRRSPLQIESLLRSFVTKYGPVVTLPIGNHPVVFIADRSIAHKALFKHGALFADRPPAPPLSKVISSNQYSISSASYGPLWRLLRRNLTSQILHSSRIVFYSQARRWVLDILLSRLQSHSQSKIPVLVVENFQYAMFCLLVLMCFGDKLEESQIREVEKVERELILSFQRFNIFNFWPKFTKILLRKRWEAFLQIRKNQENVLNRLIEERRKANKNRANKAQNEEKEEFVVSYVDTLLDLELPNEDNRKLSNEEIVTLCSEFLNAGTDTTSTALQWIMANIVKNSKIQNKLLAEIRGVMGNGSTEDEVKEEDLEKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTILENYVIPKNGTVNFMVAEMGLDPKVWEDPMVFKPERFLKGGEGEGAVFDITGSKEIKMMPFGAGRRMCPGFVLAILHLEYFIANLVWRFEWKEVKGDEVSLGEKIEFTVVMEKPLKADIIPR* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24477812 24479503 - CsaV3_2G036300.1 Csa02g02811 520868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02811 513 Coils Coil 241 269 - -
Csa02g02811 513 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 SUPERFAMILY Cytochrome P450 31 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 511 - -
Csa02g02811 513 PANTHER CYTOCHROME P450 4 511 - -
Csa02g02811 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Csa02g02811 513 Pfam Cytochrome P450 31 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02811 513 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02809 Csa-Chr2:24469512 Csa02g02811 Csa-Chr2:24477812 0 dispersed
Csa02g02811 Csa-Chr2:24477812 Csa02g02813 Csa-Chr2:24490048 0 dispersed
Csa02g02810 Csa-Chr2:24474600 Csa02g02811 Csa-Chr2:24477812 0 tandem
Csa02g02811 Csa-Chr2:24477812 Csa02g02812 Csa-Chr2:24482996 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02811 K24184 - csv:101221245 971.459