Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02812 ATGGAGATCTGCTTCATCCTCCTCATCTCCCTCGCCATCTCTATTTTCCTCCACTCCATTTTTAACCATTTTCGAAGCTCCACCAAACTCCCACCAGGCCCTTTCTTCTCCTTTTCCATCCTCACTGAACTCCTATGGCTTCGAACATCCTCCCTCCACATCGAATCTCTCCTCCGAAGCCTCATTCCCAAGTATGGCCCTGTCCTCACCCTCCCAATCGGCCTCCGCCCAGTCATTTTCATCGCCGATCACTCCGTTGCCCACAATGCCCTTGTCCTTAACGGTGCTCTCTTCTCCGACCGTCCACCCGCCCTTCCGGTCAGCAATGTCGTCTCCAGCAATCAACACGACATCAGCTCTGCCTCTTATGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCCAAATCCTCCATCCTTCTCGTCTCAAGTCCTACGCTCCAGCACGCAAACGGGTTTTGGATATTCTTCTTAATCGCCTTCAATCTGACTCTCAATCTGGAACTCCTGTCTCTGCCACTGATCATTTTCGGTACGCAATATTGTGTTTGTTGGTGTTCATGTGCTTTGGGGATAAGCTTGACGAATCCCAAATCGATCGAATCAAGAAAGTAGAGCGAGTAATCAAGTTGAATTACGGTCGTTATAACACTCTTAATTTATTCCCTAAATTGACCAAGATTTTGCTAAGAAAACGCTGGGAAGAGTTTCTTCAATTAAGAAGGAATCAAGAGGAAGTCATTATTCCTTTCATCGAAGCAAGAAGGAAGATCCAACAAAACAAAGAAAACAGAGACGAAAACAAAGAAGAAATCGTGGTCTCGTACGTTGATACGCTACTCGAATTGGAACTCCCCGATGAGAAAAGAAAGCTTACGGATACCGAAATGGTGACGATAGCCTCTGAGTTTATCAACGGAGGCTCCGATACAACATCCACAGCCTTGCAGTGGATAATGGCGAACTTAGTAAAATACCCAGAAATTCAAAACAAGCTTTTAGTAGAAATGAAAGGAGTAATGGGAGATGGATCAGAGGAGGAAGTGAAGGAAGAGGATTTGGGGAAACTTCCATATCTGAAAGCTGTGATTTTAGAAGGATTGAGGAGACACCCACCAGCGCATTTCTTGCTGCCACATGCAGTGAAAGAAGAAACAAAGTTGGGAAATTATGTGATACCAAAGAATGGAACAACGAATTACATGGTAGCAGAAATGGGTAGGGATCCGAAAGTGTGGGAAGATCCGATGGCGTTTAAGCCGGAGAGGTTCATGAAAGGCGGCGAAGAAGGAATTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCATTCGGAGCAGGGAGAAGGATGTGTCCAGGATTTGGTTTGGCGATTCTTCATTTGGAATATTTTGTTGCTAATTTGGTATGGCGATTTGAATGGAAGGCTGTTGATGGTGATGAAGTGGATCTGTCAGAGAAGGTAGAATTGACCATTGTGATGAAAAAGCCTCTGCAAGCCAACTTACGCCCAAGGTTTTAG 1533 45.6 MEICFILLISLAISIFLHSIFNHFRSSTKLPPGPFFSFSILTELLWLRTSSLHIESLLRSLIPKYGPVLTLPIGLRPVIFIADHSVAHNALVLNGALFSDRPPALPVSNVVSSNQHDISSASYGPLWRLLRRNLTSQILHPSRLKSYAPARKRVLDILLNRLQSDSQSGTPVSATDHFRYAILCLLVFMCFGDKLDESQIDRIKKVERVIKLNYGRYNTLNLFPKLTKILLRKRWEEFLQLRRNQEEVIIPFIEARRKIQQNKENRDENKEEIVVSYVDTLLELELPDEKRKLTDTEMVTIASEFINGGSDTTSTALQWIMANLVKYPEIQNKLLVEMKGVMGDGSEEEVKEEDLGKLPYLKAVILEGLRRHPPAHFLLPHAVKEETKLGNYVIPKNGTTNYMVAEMGRDPKVWEDPMAFKPERFMKGGEEGIEFDITGSKEIKMMPFGAGRRMCPGFGLAILHLEYFVANLVWRFEWKAVDGDEVDLSEKVELTIVMKKPLQANLRPRF* 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24482996 24484842 + CsaV3_2G036310.1 Csa02g02812 520869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02812 510 Coils Coil 252 272 - -
Csa02g02812 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 508 - -
Csa02g02812 510 SUPERFAMILY Cytochrome P450 31 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Csa02g02812 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 Pfam Cytochrome P450 31 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02812 510 PANTHER P450, PUTATIVE-RELATED 4 508 - -
Csa02g02812 510 Gene3D Cytochrome P450 24 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02812 Csa-Chr2:24482996 Csa02g02817 Csa-Chr2:24509116 0 dispersed
Csa02g02811 Csa-Chr2:24477812 Csa02g02812 Csa-Chr2:24482996 0 tandem
Csa02g02812 Csa-Chr2:24482996 Csa02g02813 Csa-Chr2:24490048 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02812 K24184 - csv:101205049 1009.98