Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g02813 | ATGGGGATTTGGTTCATCATTCTCGTTTCCCTATGCATCTCTACTCTCTTGATCACCTCTATTTTTACCCATTTTCGAAGCTCCACAAAGCTTCCACCATGCCCACCTTCATTTCCCATCATCACTCATTTCCAGTGGCTCTGCAAATCCCCTCTCCAAATTGAATCTCTTCTCCACAGTTTCTTCGCCAAATATGGCCCTGTCATCACCCTCCCCATTGGCAATCGCCCCGCCATCTTCATTGCCGACCGCTCCATTGCCTTCAAGGCCCTCGTCATTAACGGTGCTCTCTTCGCCGATCGTCCACCCACCCTACCCATGACCAAGATCGTCTCTAGCAACCAACACAACATCAACAGCGCTCCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCAAAATCCTTCATCCTTCCCGTATCAGTTCCTACACTAAAGCTCGCAAGTGGGTTTTGGATATTCTTTTCAATCGCCTCCACTCTCATTCTGAATTTGGAAACCCCGTCTTATTCATGGAGCACTTTCAGTACGCCATGTTTTGTTTGTTGGTGCTAATGTGCTTTGGGGATAGACTTGATGAATCCAAGATTCGAGAAATCGAGAACGTGGAGCGAGCGCTTATATTGAGTTTTTCACCTTTCGACATTCTCAATTTTTGGCCTAAACTCACTAAGATTCTATTTCGAAAACGCTGGGAAATGCTTATCCAACTGAGAAGGAACCAAGAAAAGGTCCTAATTCCTTTGATTGAAGCTCGAAGGAAGGTCAATCAAAACAGAGTAAACAGAGCCCACACGGAAGAAGAAGAAGAATTCGCGATATCATATGTGGACACATTGCTCGATTTGGAGCTATCCCACGAGGACAATAGAAAGCTTACTAATGAGGAGATAGTCACCATATGCTCTGAGTTCCTCGTCGGGGGCACCGACACCACCTGCACGGCTCTGCAATGGACAATGGCGAATATTGTGAAAAACCCAGAAATCCAGCACAAGCTCTTCTCAGAAATGAAAGAAGTAATGGGAGATGGACCAGGGAAAGAGGTGAAGGAAGAAGACTTGGAGAAAATCCCATATCTAAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCGTGCTACCACACACAGTGACAGAAGACACGGTGTTGGAAAATTACGTGATACCAAAGAATGGGACAGTGAATTTCATGGTAGCAGAGATGGGTTGGAATTCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGAAAGGCGGAGGAGGAGGAGTTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCATTCGGAATAGGGAGAAGGATGTGTCCTGGATTTGAACTAGCGATTCTTCATATGGAATATTTCATTGGGAACCTGATATGGAAGTTTGAATGGAAAGAGGTGAAGGGAGAGGAAGTTAGTCTGTCGGAGAAGGTGGCCTTCACGGTGGTTATGGAAAAGCCTCTTAAAGCCAAAATAAATCCCCGGTGA | 1539 | 45.87 | MGIWFIILVSLCISTLLITSIFTHFRSSTKLPPCPPSFPIITHFQWLCKSPLQIESLLHSFFAKYGPVITLPIGNRPAIFIADRSIAFKALVINGALFADRPPTLPMTKIVSSNQHNINSAPYGPLWRLLRRNLTSKILHPSRISSYTKARKWVLDILFNRLHSHSEFGNPVLFMEHFQYAMFCLLVLMCFGDRLDESKIREIENVERALILSFSPFDILNFWPKLTKILFRKRWEMLIQLRRNQEKVLIPLIEARRKVNQNRVNRAHTEEEEEFAISYVDTLLDLELSHEDNRKLTNEEIVTICSEFLVGGTDTTCTALQWTMANIVKNPEIQHKLFSEMKEVMGDGPGKEVKEEDLEKIPYLKAVVLEGLRRHPPGHFVLPHTVTEDTVLENYVIPKNGTVNFMVAEMGWNSKVWEDPMEFKPERFMKGGGGGVEFDITGSKEIKMMPFGIGRRMCPGFELAILHMEYFIGNLIWKFEWKEVKGEEVSLSEKVAFTVVMEKPLKAKINPR* | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24490048 | 24491854 | - | CsaV3_2G036320.1 | Csa02g02813 | 520870 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 511 | - | - | |
Csa02g02813 | 512 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | Pfam | Cytochrome P450 | 32 | 503 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | Gene3D | Cytochrome P450 | 25 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | PANTHER | CYTOCHROME P450 | 4 | 511 | - | - | |
Csa02g02813 | 512 | SUPERFAMILY | Cytochrome P450 | 32 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02813 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02811 | Csa-Chr2:24477812 | Csa02g02813 | Csa-Chr2:24490048 | 0 | dispersed | |
Csa02g02813 | Csa-Chr2:24490048 | Csa02g02817 | Csa-Chr2:24509116 | 0 | dispersed | |
Csa02g02812 | Csa-Chr2:24482996 | Csa02g02813 | Csa-Chr2:24490048 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g02813 | K24184 | - | csv:101204800 | 1045.8 |