Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02813 ATGGGGATTTGGTTCATCATTCTCGTTTCCCTATGCATCTCTACTCTCTTGATCACCTCTATTTTTACCCATTTTCGAAGCTCCACAAAGCTTCCACCATGCCCACCTTCATTTCCCATCATCACTCATTTCCAGTGGCTCTGCAAATCCCCTCTCCAAATTGAATCTCTTCTCCACAGTTTCTTCGCCAAATATGGCCCTGTCATCACCCTCCCCATTGGCAATCGCCCCGCCATCTTCATTGCCGACCGCTCCATTGCCTTCAAGGCCCTCGTCATTAACGGTGCTCTCTTCGCCGATCGTCCACCCACCCTACCCATGACCAAGATCGTCTCTAGCAACCAACACAACATCAACAGCGCTCCTTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTCACTTCCAAAATCCTTCATCCTTCCCGTATCAGTTCCTACACTAAAGCTCGCAAGTGGGTTTTGGATATTCTTTTCAATCGCCTCCACTCTCATTCTGAATTTGGAAACCCCGTCTTATTCATGGAGCACTTTCAGTACGCCATGTTTTGTTTGTTGGTGCTAATGTGCTTTGGGGATAGACTTGATGAATCCAAGATTCGAGAAATCGAGAACGTGGAGCGAGCGCTTATATTGAGTTTTTCACCTTTCGACATTCTCAATTTTTGGCCTAAACTCACTAAGATTCTATTTCGAAAACGCTGGGAAATGCTTATCCAACTGAGAAGGAACCAAGAAAAGGTCCTAATTCCTTTGATTGAAGCTCGAAGGAAGGTCAATCAAAACAGAGTAAACAGAGCCCACACGGAAGAAGAAGAAGAATTCGCGATATCATATGTGGACACATTGCTCGATTTGGAGCTATCCCACGAGGACAATAGAAAGCTTACTAATGAGGAGATAGTCACCATATGCTCTGAGTTCCTCGTCGGGGGCACCGACACCACCTGCACGGCTCTGCAATGGACAATGGCGAATATTGTGAAAAACCCAGAAATCCAGCACAAGCTCTTCTCAGAAATGAAAGAAGTAATGGGAGATGGACCAGGGAAAGAGGTGAAGGAAGAAGACTTGGAGAAAATCCCATATCTAAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCGTGCTACCACACACAGTGACAGAAGACACGGTGTTGGAAAATTACGTGATACCAAAGAATGGGACAGTGAATTTCATGGTAGCAGAGATGGGTTGGAATTCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGAAAGGCGGAGGAGGAGGAGTTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCATTCGGAATAGGGAGAAGGATGTGTCCTGGATTTGAACTAGCGATTCTTCATATGGAATATTTCATTGGGAACCTGATATGGAAGTTTGAATGGAAAGAGGTGAAGGGAGAGGAAGTTAGTCTGTCGGAGAAGGTGGCCTTCACGGTGGTTATGGAAAAGCCTCTTAAAGCCAAAATAAATCCCCGGTGA 1539 45.87 MGIWFIILVSLCISTLLITSIFTHFRSSTKLPPCPPSFPIITHFQWLCKSPLQIESLLHSFFAKYGPVITLPIGNRPAIFIADRSIAFKALVINGALFADRPPTLPMTKIVSSNQHNINSAPYGPLWRLLRRNLTSKILHPSRISSYTKARKWVLDILFNRLHSHSEFGNPVLFMEHFQYAMFCLLVLMCFGDRLDESKIREIENVERALILSFSPFDILNFWPKLTKILFRKRWEMLIQLRRNQEKVLIPLIEARRKVNQNRVNRAHTEEEEEFAISYVDTLLDLELSHEDNRKLTNEEIVTICSEFLVGGTDTTCTALQWTMANIVKNPEIQHKLFSEMKEVMGDGPGKEVKEEDLEKIPYLKAVVLEGLRRHPPGHFVLPHTVTEDTVLENYVIPKNGTVNFMVAEMGWNSKVWEDPMEFKPERFMKGGGGGVEFDITGSKEIKMMPFGIGRRMCPGFELAILHMEYFIGNLIWKFEWKEVKGEEVSLSEKVAFTVVMEKPLKAKINPR* 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24490048 24491854 - CsaV3_2G036320.1 Csa02g02813 520870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02813 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 511 - -
Csa02g02813 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 Pfam Cytochrome P450 32 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 PANTHER CYTOCHROME P450 4 511 - -
Csa02g02813 512 SUPERFAMILY Cytochrome P450 32 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02813 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02811 Csa-Chr2:24477812 Csa02g02813 Csa-Chr2:24490048 0 dispersed
Csa02g02813 Csa-Chr2:24490048 Csa02g02817 Csa-Chr2:24509116 0 dispersed
Csa02g02812 Csa-Chr2:24482996 Csa02g02813 Csa-Chr2:24490048 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02813 K24184 - csv:101204800 1045.8