Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02815 ATGCACTTACCACATTCCATGACACATTACCACATGGATTTGGATTTAAAGTCAGATTCAAGTTCAAGAGTCAATCAGTCTCAAACACACAAAAAAATGGATACCTGGTTCATCATCATCCTTATCTCCTTCTCCATTTGCTATCTTCTCAGCTCCATTTTTACCAAATTCCAAACCTCCACCAAGCTCCCACCAGGCCCTCCTTCAATCCCCATCCTCTCCACCTTCTTATGGTTCCGTACATCGCCTCTTCAAATGGAGTCATACCTCCGCACCGCCGTCGCCAAATACGGCCCCATTGTCACTCTCCGCATTGGCTCTCGCCCTTCCATCTTCATCGCCGACCGCACCATTGCCCACAAAGCCCTCTTCCAACACGGCGCTCTCTTCGCCGACCGCCCACCGGTTCCTCCTTTAACCAAAATCCTCACAAGCAACCAACACAGTATCAACTCCGCCGCCTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTTACTTCCCAAATTCTTCATCCTTCCCGTATTAGATCCTACGGCCATGCTCGCGAGTGGGTTTTGGGTATTCTTCTTAATCGTCTTTTCTCTCACTCTGAATCGGGAAGTTCCGTCTATGTTGTAGATCATTTTCAGTACGCTATGTTCTGTTTAATGGTGTTGATGTGTTTTGGGGATAAACTTGAGGAATCCCAAATCAAAGAAGTCGAGAATGTGCAGCGTACAATGCTGTTAAATTTTAGGCGTTTTGGTCTCCTTAATTTATCTCCTAAATTGACCAAGTTTTTTCTTCCGAAGCGCTGGGAGGAGTTTCTGCAACTAAGAAGGAACCAAGAGAGAGTCATAATCCCGTTAATCGAAGCAAGAAGAGAAGCGATAAAAAGCAGAGCAAACAGAGGGAAGAGAGAAGGTGAAAAACAAGAACAAGAAGACGGTAAAGAATTCGTGTTGTCATATGTAGATACACTACTCGAATTACAACTCCCCAACGAGGATAATAGAAAGCTAACGAACAGCGAAATGGTCACATTATGCTCTGAATTCCTCACTGGCGGAACCGATACAACATCCACAACCTTGCAATGGATAATGGCAAATTTAGTGAAAAACCCAGAAATTCAGCACAAGCTTTTTACAGAAATGAAAGAAGTAATGGGCGATGGAACAAGGGAGGAAGTGAAGGAAGAGGATTTGGGGAAGCTTCCATATCTAAAAGCAGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCTTACAAGCACGAGGAGTGAAGGAGGATATACAATTTGAGAATTACTTGATACCCAAAAACGGGACTGTGAATTTCTTGGCAGCGGAGATTGGTCGAGATCCAACAGTGTGGGAAGAACCGATGGCGTTTAAGCCGGAGAGGTTTATGAATGGCGACGGAGGAGAAGAAGCGGCAGGGTTCGATGTAACAGGGAGTAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGAAGGATATGTCCTGGCTATGGTTTGGGGATTCTTCATTTGGAATATTTCTTAGCGAATTTATTATGGAAGTTTGATTGGAGAGGTGTGGAGGGAGATAATGTTGATCTGTCGGAGAAGTTAGAGTTCACAGTTGTGATGAAAAAGCCTCTGAAAGCAAACATAATTCTGAGGTTGTAA 1665 44.8 MHLPHSMTHYHMDLDLKSDSSSRVNQSQTHKKMDTWFIIILISFSICYLLSSIFTKFQTSTKLPPGPPSIPILSTFLWFRTSPLQMESYLRTAVAKYGPIVTLRIGSRPSIFIADRTIAHKALFQHGALFADRPPVPPLTKILTSNQHSINSAAYGPLWRLLRRNLTSQILHPSRIRSYGHAREWVLGILLNRLFSHSESGSSVYVVDHFQYAMFCLMVLMCFGDKLEESQIKEVENVQRTMLLNFRRFGLLNLSPKLTKFFLPKRWEEFLQLRRNQERVIIPLIEARREAIKSRANRGKREGEKQEQEDGKEFVLSYVDTLLELQLPNEDNRKLTNSEMVTLCSEFLTGGTDTTSTTLQWIMANLVKNPEIQHKLFTEMKEVMGDGTREEVKEEDLGKLPYLKAVVLEGLRRHPPGHFLQARGVKEDIQFENYLIPKNGTVNFLAAEIGRDPTVWEEPMAFKPERFMNGDGGEEAAGFDVTGSKEIKMMPFGAGRRICPGYGLGILHLEYFLANLLWKFDWRGVEGDNVDLSEKLEFTVVMKKPLKANIILRL* 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24504904 24506568 - CsaV3_2G036340.1 Csa02g02815 520872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02815 554 PANTHER CYTOCHROME P450 38 549 - -
Csa02g02815 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
Csa02g02815 554 Gene3D Cytochrome P450 56 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS P450 superfamily signature 350 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS P450 superfamily signature 499 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 118 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 339 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 359 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 SUPERFAMILY Cytochrome P450 64 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 Pfam Cytochrome P450 64 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02815 554 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 38 549 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02815 Csa-Chr2:24504904 Csa05g00085 Csa-Chr5:418230 0 dispersed
Csa02g02815 Csa-Chr2:24504904 Csa02g02817 Csa-Chr2:24509116 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02815 K24184 - csv:105434706 1078.93