Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa02g02817 | ATGGAGGTGTGGTTCATCCTCATAATCTCTATCTGTATCTGCTCTCTTCTAAACTCCATTTTCTCCCATTTCCGAAGCTCCAAAAAACTCCCACCAGGCCCTCCTTCAATCCCCATCCTCACAAATCTCCAATGGCTTCGAAAGTCCCCCCTTCAAATGGAATCACTTCTCCGCACCTTCGTCTCCAAATACGGTCCCATCGTCACCCTCCCCATCGGCTCCCGCCCTGCCGTCTTCATCGCCGACCGTTCTATCGCCCACAAAGCCCTCGTCCTCAACGGCGCTCTCTTCGCCGACCGTCCACCGGCGCCACCCGTCACCAAGATCGCTTCCAGTAACCAACACAACATCAACACCGCTTCTTACGGCCCACTCTGGCGTCTCCTCCGCCGTAATCTTACTTCCCAAATCCTCCATCCTTCTCGTGTCAAATCCTACGGCCGTGCTCGTAAGTGGGTTTTGGATGTTCTTATTAATCGATTTGTTTCTCAATCTCAATCGGGAAATCCTGTTTGCGTTATTGATCATTTTCAGTACGCTATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAAGTTAGCGAATCCCAGATTAAGGAAATCGAGAACGTACATCATATAATGCTGATAAATCTTAGGCGTTTTAATATCCTTAATTTCTGGCCTAAATTGACCAAGATTTTCCTCCGAAAGCGGTGGGAAACCTTTCTTAAATTCAAGAAGAATCGTGATGAAGTCCTGATTCCATTGATCGAAGCAAGAAGAAAGGCCAAGGAAAACAGAGGAGGAGAAGAAAAACAGGACGAAGAATTCGTGGTGTCGTACGTCGATACGCTTCTCGATTTGGATCACCCAGAGGAAAAGAGAAAGCTCACAGAGGAAGAAATTGTTGCCATAGCCTCCGAATTTCTCAACGCCGGCACCGATACGACATCCACAGCTTTGCAATGGATAATGGCAAATTTAGTGAAGAACCCAGAAATTCAAAACAAGCTTTACGCAGAGATTAAAGGAGTAATGGGAGATGGGTCAAGAGAGGAGGTGATGGAAGAGGAATTGGGGAAACTTCCATATCTGAAAGCGGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCGTGTTACCACACGCTGTGAAAGAAGATACAGAGTTGGAGAATTATGTGATACCGAAGAATGGGAGTGTGAATTTCATGGTGGCAGAAATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCAGAGAGGTTCATGAAAGGCGGTGCAGGAGAGGAAGGAGTTGTTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGAGTATGTCCTGGATTTGGTTTGGCAATTCTTCATCTGGAGTATTTCATTGGGAATTTGGTATGGAAATTTGAATGGAAGGGGGTAGAAGGAGAGGATGTTGATCTGTCGGAGAAGGTAGAGTTCACCGTGGTGATGGAAAAACCTCTTAAAGCCAACGTAATTTGTAGATTCTAA | 1539 | 45.87 | MEVWFILIISICICSLLNSIFSHFRSSKKLPPGPPSIPILTNLQWLRKSPLQMESLLRTFVSKYGPIVTLPIGSRPAVFIADRSIAHKALVLNGALFADRPPAPPVTKIASSNQHNINTASYGPLWRLLRRNLTSQILHPSRVKSYGRARKWVLDVLINRFVSQSQSGNPVCVIDHFQYAMFCLLVLMCFGDKVSESQIKEIENVHHIMLINLRRFNILNFWPKLTKIFLRKRWETFLKFKKNRDEVLIPLIEARRKAKENRGGEEKQDEEFVVSYVDTLLDLDHPEEKRKLTEEEIVAIASEFLNAGTDTTSTALQWIMANLVKNPEIQNKLYAEIKGVMGDGSREEVMEEELGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTELENYVIPKNGSVNFMVAEMGWDPKVWEDPMEFKPERFMKGGAGEEGVVEFDITGSKEIKMMPFGAGRRVCPGFGLAILHLEYFIGNLVWKFEWKGVEGEDVDLSEKVEFTVVMEKPLKANVICRF* | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 24509116 | 24511833 | - | CsaV3_2G036360.1 | Csa02g02817 | 520874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa02g02817 | 512 | PANTHER | CYTOCHROME P450 | 4 | 507 | - | - | |
Csa02g02817 | 512 | Pfam | Cytochrome P450 | 31 | 503 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 296 | 313 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 361 | 379 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 402 | 426 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 447 | 457 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | E-class P450 group I signature | 457 | 480 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 507 | - | - | |
Csa02g02817 | 512 | SUPERFAMILY | Cytochrome P450 | 31 | 511 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 450 | 459 | IPR017972 | GO:0005506|GO:0016705 | |
Csa02g02817 | 512 | Gene3D | Cytochrome P450 | 23 | 512 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | P450 superfamily signature | 362 | 373 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | P450 superfamily signature | 448 | 457 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa02g02817 | 512 | PRINTS | P450 superfamily signature | 457 | 468 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02810 | Csa-Chr2:24474600 | Csa02g02817 | Csa-Chr2:24509116 | 0 | dispersed | |
Csa02g02812 | Csa-Chr2:24482996 | Csa02g02817 | Csa-Chr2:24509116 | 0 | dispersed | |
Csa02g02813 | Csa-Chr2:24490048 | Csa02g02817 | Csa-Chr2:24509116 | 0 | dispersed | |
Csa02g02817 | Csa-Chr2:24509116 | Csa05g00085 | Csa-Chr5:418230 | 0 | dispersed | |
Csa06g03530 | Csa-Chr6:28747373 | Csa02g02817 | Csa-Chr2:24509116 | 1.33E-119 | dispersed | |
Csa02g02815 | Csa-Chr2:24504904 | Csa02g02817 | Csa-Chr2:24509116 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa02g02817 | K24184 | - | csv:101204559 | 1027.7 |