Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02817 ATGGAGGTGTGGTTCATCCTCATAATCTCTATCTGTATCTGCTCTCTTCTAAACTCCATTTTCTCCCATTTCCGAAGCTCCAAAAAACTCCCACCAGGCCCTCCTTCAATCCCCATCCTCACAAATCTCCAATGGCTTCGAAAGTCCCCCCTTCAAATGGAATCACTTCTCCGCACCTTCGTCTCCAAATACGGTCCCATCGTCACCCTCCCCATCGGCTCCCGCCCTGCCGTCTTCATCGCCGACCGTTCTATCGCCCACAAAGCCCTCGTCCTCAACGGCGCTCTCTTCGCCGACCGTCCACCGGCGCCACCCGTCACCAAGATCGCTTCCAGTAACCAACACAACATCAACACCGCTTCTTACGGCCCACTCTGGCGTCTCCTCCGCCGTAATCTTACTTCCCAAATCCTCCATCCTTCTCGTGTCAAATCCTACGGCCGTGCTCGTAAGTGGGTTTTGGATGTTCTTATTAATCGATTTGTTTCTCAATCTCAATCGGGAAATCCTGTTTGCGTTATTGATCATTTTCAGTACGCTATGTTCTGTTTGTTGGTGTTGATGTGTTTTGGGGATAAAGTTAGCGAATCCCAGATTAAGGAAATCGAGAACGTACATCATATAATGCTGATAAATCTTAGGCGTTTTAATATCCTTAATTTCTGGCCTAAATTGACCAAGATTTTCCTCCGAAAGCGGTGGGAAACCTTTCTTAAATTCAAGAAGAATCGTGATGAAGTCCTGATTCCATTGATCGAAGCAAGAAGAAAGGCCAAGGAAAACAGAGGAGGAGAAGAAAAACAGGACGAAGAATTCGTGGTGTCGTACGTCGATACGCTTCTCGATTTGGATCACCCAGAGGAAAAGAGAAAGCTCACAGAGGAAGAAATTGTTGCCATAGCCTCCGAATTTCTCAACGCCGGCACCGATACGACATCCACAGCTTTGCAATGGATAATGGCAAATTTAGTGAAGAACCCAGAAATTCAAAACAAGCTTTACGCAGAGATTAAAGGAGTAATGGGAGATGGGTCAAGAGAGGAGGTGATGGAAGAGGAATTGGGGAAACTTCCATATCTGAAAGCGGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGGACATTTCGTGTTACCACACGCTGTGAAAGAAGATACAGAGTTGGAGAATTATGTGATACCGAAGAATGGGAGTGTGAATTTCATGGTGGCAGAAATGGGTTGGGATCCAAAAGTGTGGGAAGATCCGATGGAGTTTAAGCCAGAGAGGTTCATGAAAGGCGGTGCAGGAGAGGAAGGAGTTGTTGAGTTTGATATAACAGGGAGCAAAGAGATAAAGATGATGCCGTTTGGAGCAGGGAGGAGAGTATGTCCTGGATTTGGTTTGGCAATTCTTCATCTGGAGTATTTCATTGGGAATTTGGTATGGAAATTTGAATGGAAGGGGGTAGAAGGAGAGGATGTTGATCTGTCGGAGAAGGTAGAGTTCACCGTGGTGATGGAAAAACCTCTTAAAGCCAACGTAATTTGTAGATTCTAA 1539 45.87 MEVWFILIISICICSLLNSIFSHFRSSKKLPPGPPSIPILTNLQWLRKSPLQMESLLRTFVSKYGPIVTLPIGSRPAVFIADRSIAHKALVLNGALFADRPPAPPVTKIASSNQHNINTASYGPLWRLLRRNLTSQILHPSRVKSYGRARKWVLDVLINRFVSQSQSGNPVCVIDHFQYAMFCLLVLMCFGDKVSESQIKEIENVHHIMLINLRRFNILNFWPKLTKIFLRKRWETFLKFKKNRDEVLIPLIEARRKAKENRGGEEKQDEEFVVSYVDTLLDLDHPEEKRKLTEEEIVAIASEFLNAGTDTTSTALQWIMANLVKNPEIQNKLYAEIKGVMGDGSREEVMEEELGKLPYLKAVVLEGLRRHPPGHFVLPHAVKEDTELENYVIPKNGSVNFMVAEMGWDPKVWEDPMEFKPERFMKGGAGEEGVVEFDITGSKEIKMMPFGAGRRVCPGFGLAILHLEYFIGNLVWKFEWKGVEGEDVDLSEKVEFTVVMEKPLKANVICRF* 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24509116 24511833 - CsaV3_2G036360.1 Csa02g02817 520874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02817 512 PANTHER CYTOCHROME P450 4 507 - -
Csa02g02817 512 Pfam Cytochrome P450 31 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 507 - -
Csa02g02817 512 SUPERFAMILY Cytochrome P450 31 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Csa02g02817 512 Gene3D Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa02g02817 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02810 Csa-Chr2:24474600 Csa02g02817 Csa-Chr2:24509116 0 dispersed
Csa02g02812 Csa-Chr2:24482996 Csa02g02817 Csa-Chr2:24509116 0 dispersed
Csa02g02813 Csa-Chr2:24490048 Csa02g02817 Csa-Chr2:24509116 0 dispersed
Csa02g02817 Csa-Chr2:24509116 Csa05g00085 Csa-Chr5:418230 0 dispersed
Csa06g03530 Csa-Chr6:28747373 Csa02g02817 Csa-Chr2:24509116 1.33E-119 dispersed
Csa02g02815 Csa-Chr2:24504904 Csa02g02817 Csa-Chr2:24509116 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02817 K24184 - csv:101204559 1027.7