Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa02g02830 ATGCAATATCAAGGAGATGCTGTTGCTTCTAATGGAAAGATTTTGCTTAGTGGCCCTAAATCTTATTCCCATGTTGGTAGAGTTATTTACAAAGATACAATCCCAATTTGGGACTCTAAAACTAGAAAACTCACTGATTTCTCAACCCATTTCACCTTCTCTATTGATACACAAAATCGAACAAAATATGGTAGTGGGATTGCTTTCTTCTTAGCTCCACCTGACTCTCAAATCCCTACAAATTCAGCTGGTGGGTATCTTGGACTTTACAACAAGACCTATAAAAACACCCCTATCAACCAAATTCTTCATGTTGAATTTGATACTCATATCAATGATGAGTGGGATCCTTCTTATGAACATGTGGGTATCAATATTAACTCTGTCTCTTCTTCTAATACTACTCATTTTAACGTTACGTTACATAGTGGGGATTTGGCTGATGTGTGGATTGACTACAGTTCAACCACTAAAAACTTGAGTGTTTCTTGGAAATACCAAAAGACATCTACTTCATTAGAAAATACTACCTTGAGTTATCATATTGATCTAAGGGATATTCTTCCTGAATGGGTGACAGTGGGAATTACAGGAGCAAATGGTGCAAATGTGGAAAGACATACTCTGTTTTCTTGGGAATTCAACTCTACATTGGATATGAAGCAACCAAGTAAAGATAGTGGAAACAAAGTTACTGTCATTGTAGGTGTAACAGTTTCAGTTGGGGTTTTAATAATTGTGTTATTTGCTGTACTTTGGTGGTTGAAGCGAAAGAAAAGGAAATTAGGAGAGGAAGAAAATCTTGAGGAAGTGAATTTGACATCCATTAATGATGATTTGGAAACAGGGGCTGGGCCAAGAAGGTTTTCTCACAAGCTTCTTGCCATGGCGACCAACAACTTTTCTAATGAGAGGAAGCTAGGGGAAGGAGGATTCGGTGCAGTGTATAGAGGCTACATACCAAGCATAGATTTGACAGTAGCTGTGAAGAAAATATCAAGGGGTTCGAGACAAGGGAGAAATGAGTATATAACCGAAGTGAAGATCATTAGTCGGCTTCGTCATCGAAACTTGGTGCAACTCATTGGTTGGTGTCACGATAAAGGTGAGTTCTTGTTGGTTTATGAATTCATGTCTAATGGTAGTCTTGATTCTCATCTATTTGGGAAAAGAACCCCTCTTGGTTGGACTGTGAGATATAAGATTGCTTTAGGTCTAGCCTCTGCTTTATTATATCTCCATGAAGAATGGGAACAGTGTGTGGTTCATAGAGATATTAAATCTAGTAACGTCATGTTGGATTCAAACTTTAATGTCAAGCTTGGAGATTTTGGGCTTGCTCGATTAATGGAACATGAGTTGGGTGCTCGAACAACTAGGTTGGCTGGAACTTTGGGGTACTTAGCACCAGAATACATAAGTACAAATAGAGCTAGTAAGGAATCTGATGTATTTAGTTTTGGAGTGGTCGCTTTAGAGATTGCTACGGGGAAAAAGTCAAGAACGTCTTTGGAAGAAGAATCCCATAAGGGTTTAGTAGAGTGGGTTTGGGATCTTTATGGGAGTGGACAATTGCATGTTGGGATAGATGAGAAATTACATTCTGATTATGACAAGAAACAAGTTGAGTGTTTGATGCTAGTTGGACTATGGAGTGCTTATCCAGACCCTAATCTTAGACCATCCATAAAACAAGTGATTCAAGTTCTAAGCTTTGAGACAATGATGCCTAATCTTCCAAATAAAATGCCTGTTCCTACATACCCTGCTCCTTCCACATCGACAAGCTCAAATGAACATTCCTTCACGGTTAGTCTTGACATGGGTCGTTGA 1833 38.79 MQYQGDAVASNGKILLSGPKSYSHVGRVIYKDTIPIWDSKTRKLTDFSTHFTFSIDTQNRTKYGSGIAFFLAPPDSQIPTNSAGGYLGLYNKTYKNTPINQILHVEFDTHINDEWDPSYEHVGININSVSSSNTTHFNVTLHSGDLADVWIDYSSTTKNLSVSWKYQKTSTSLENTTLSYHIDLRDILPEWVTVGITGANGANVERHTLFSWEFNSTLDMKQPSKDSGNKVTVIVGVTVSVGVLIIVLFAVLWWLKRKKRKLGEEENLEEVNLTSINDDLETGAGPRRFSHKLLAMATNNFSNERKLGEGGFGAVYRGYIPSIDLTVAVKKISRGSRQGRNEYITEVKIISRLRHRNLVQLIGWCHDKGEFLLVYEFMSNGSLDSHLFGKRTPLGWTVRYKIALGLASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNVKLGDFGLARLMEHELGARTTRLAGTLGYLAPEYISTNRASKESDVFSFGVVALEIATGKKSRTSLEEESHKGLVEWVWDLYGSGQLHVGIDEKLHSDYDKKQVECLMLVGLWSAYPDPNLRPSIKQVIQVLSFETMMPNLPNKMPVPTYPAPSTSTSSNEHSFTVSLDMGR* 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24608653 24610768 - CsaV3_2G036490.1 Csa02g02830 520887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa02g02830 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Csa02g02830 610 ProSiteProfiles Protein kinase domain profile. 301 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g02830 610 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 219 IPR013320 -
Csa02g02830 610 ProSitePatterns Protein kinases ATP-binding region signature. 307 331 IPR017441 GO:0005524
Csa02g02830 610 MobiDBLite consensus disorder prediction 587 610 - -
Csa02g02830 610 Gene3D Transferase(Phosphotransferase) domain 1 378 591 - -
Csa02g02830 610 Gene3D - 1 233 - -
Csa02g02830 610 Pfam Protein kinase domain 302 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g02830 610 CDD lectin_legume_LecRK_Arcelin_ConA 1 218 IPR001220 GO:0030246
Csa02g02830 610 Gene3D Phosphorylase Kinase; domain 1 286 377 - -
Csa02g02830 610 Pfam Legume lectin domain 2 227 IPR001220 GO:0030246
Csa02g02830 610 PANTHER PUTATIVE-RELATED 3 610 - -
Csa02g02830 610 SUPERFAMILY Protein kinase-like (PK-like) 285 597 IPR011009 -
Csa02g02830 610 PANTHER - 3 610 - -
Csa02g02830 610 SMART serkin_6 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa02g02830 610 MobiDBLite consensus disorder prediction 588 604 - -
Csa02g02830 610 CDD STKc_IRAK 307 570 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02830 Csa-Chr2:24608653 Csa02g02834 Csa-Chr2:24629504 0 dispersed
Csa02g02836 Csa-Chr2:24636725 Csa02g02830 Csa-Chr2:24608653 1.36E-118 dispersed
Csa02g02829 Csa-Chr2:24602109 Csa02g02830 Csa-Chr2:24608653 1.87E-47 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77939 PF00069 Pkinase 1.20E-48 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa02g02830 - - csv:101203586 1172.53