Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00007 ATGACCTTTGACATGGCTCAGAGTGCTAGGACAATCGGATCTTCCTTTAACTCCAGCAGTGGCAATGATGATACTCTCCTTCAAAGCTTTGCTGCTGCTCCAAATGGGGATGATTATGATAGTGATGGCTCCAATTTTGCACCCCCTACTCCTACAACCATATCCACAGCAATTCCTGCAGAACTTGCTGGTGTCATACCTTTGATTGATAGATTTCAGGTTGAAGGATTCTTAAGGATGATGCACAAACAAATCCATTCTTCTGGAAAGCGTGGATTCTTTTCCAAAAGATCTGTAGGTCCTCAAGTTCGGGAAAAATTCACATTTGAAGATATGTTGTGTTTCCAAAAGGATCCTATACCAACTTCGTTGCTTAAAATCAACTCTGACTTGGTGAGCCGAGCCATAAAACTATTCCAAATAATCTTGAAGTACATGGGTGTTGACTCTTCTGATCGAGTTAGTGCAACAAGCTTAGATGAACGAATTGAACTTGTTGGAAAACTGTACAAGCACACTTTGAAACGTTCAGAGCTACGAGATGAACTTTTTATCCAAATCTCTAAGCAAACTAGAAATTCTCCTGATAGGCAATATTTAATCAAAGCATGGGAGCTGATGTATTTATGTGCATCAGCTATGCCTCCTAGCAAGGATATTGGTGGATATTTATCAGAGTATGTTCATAATGTTGCTCAAGGCGTAAGTACTGATCCGGAGGTTCGAGTTCTTGCATTAAATACACTGAATGCTTTAAAGCGTTGCATGAAGGCTGGTCCCAGGCATATAATACCTGGTCGTGAGGAAATCGAAGCTCTTTTGACAGGCCGAAAACTTACAACTATTGTATTTTTTTTGGATGAAACTTTTGAAGAAATTACATATGATATGACAACAACGGTCGCTGATTCTGTTGAGGAACTTTCAGGTGTTATAAAACTATCAGCACACTCTAGCTTCAGTCTTTTTGAATGCCGTAAGTTCGTTAGTGGAGCTAAAGCACTTGATCTAGGGAATGAGGAGTATGTTGGGCTTGATGATAACAAATATATTGGAGATCTGCTAGCAGAATTCAAGGCAACAAAAGATCGAAGCAAAGGAGAAATTCTGCACTTCAAGTTGACATTTAAAAAGAAGCTGTTTAGGGAGTCTGATGAAGCTGTTGTGGACCCAATGTTTATACAACTATCATATGTTCAGCTGCAGCATGACTATCTGTTGGGGAATTATCCTGTTGGAAGGGATTGA 1248 39.74 MTFDMAQSARTIGSSFNSSSGNDDTLLQSFAAAPNGDDYDSDGSNFAPPTPTTISTAIPAELAGVIPLIDRFQVEGFLRMMHKQIHSSGKRGFFSKRSVGPQVREKFTFEDMLCFQKDPIPTSLLKINSDLVSRAIKLFQIILKYMGVDSSDRVSATSLDERIELVGKLYKHTLKRSELRDELFIQISKQTRNSPDRQYLIKAWELMYLCASAMPPSKDIGGYLSEYVHNVAQGVSTDPEVRVLALNTLNALKRCMKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMTTTVADSVEELSGVIKLSAHSSFSLFECRKFVSGAKALDLGNEEYVGLDDNKYIGDLLAEFKATKDRSKGEILHFKLTFKKKLFRESDEAVVDPMFIQLSYVQLQHDYLLGNYPVGRD* 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 203128 207118 + CsaV3_3G000070.1 Csa03g00007 520912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00007 415 SMART MyTH4_1 115 274 IPR000857 GO:0005856
Csa03g00007 415 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Csa03g00007 415 Gene3D MyTH4 domain 94 276 IPR038185 -
Csa03g00007 415 PANTHER MYOSIN-VIIA-LIKE PROTEIN 19 412 - -
Csa03g00007 415 Gene3D - 278 382 - -
Csa03g00007 415 PANTHER MYOSIN VII, XV 19 412 - -
Csa03g00007 415 ProSiteProfiles FERM domain profile. 279 415 IPR000299 GO:0005856
Csa03g00007 415 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00007 - - csv:101206704 792.341