Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00015 ATGTCTGTTTTTTGTCTTTGCTTCTGCCTTTTATTGACTGGCGCCGCCGCGTCCGGTGGAGACGGCGGTTCCCACTCCAGGGATCTCGATAACACACCCACCTGGGCTGTTGCTGCTGTTTGCTTCTTTTTCGTTCTTATTTCCATTGTCTTGGAAAATGTTATTCACAAACTTGGAACGTGGTTGACAAAAAAGCACAAGAGTTCTCTGTATGAAGCTCTGGAGAAGGTTAAGGCTGAGTTGATGATTTTGGGTTTCATCTCCCTGCTTCTGACTTTTGCTCAAGCATATATTGTCCAAATTTGTATTCCTCCGGCCATTGCAAACTCCATGTTGCCCTGTCGCCGTGAAGAGAAAAATGCCTCAACCGATGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGTCACAATGTTGTCTCGTGTGAGGATGGTAAGGTGTCTCTTATATCCATTGATGGATTGCATCAGTTGCATATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGATAAAGATTCGAGGCTGGAAGGAGTGGGAGCAGGAAACTTCAACGCATAACTATGAGTTTTTCAACGATCCTGCAAGATTTAGGCTTACTCACGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTAGTTGCTTCTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACGCTACGCAATGGATTCATAACAGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGATGACTTCAAGGTAGTCGTCGGTGTGAGTCCTTTTCTATGGTCGTCATTTGTGATCTTCCTGCTCCTTAATTTATCTGGATGGCATACATTGTTCTGGGCATCATTTATCCCTCTGCTTATAATCTTAGCCGTTGGATCAAAACTTCAAGCCATTTTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCCGACAAGTATTTCTGGTTCGGCCGCCCTCAACTGATTCTTCATCTCATGCATTTTTCTTTATTTCAGAATGCATTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCTGAATTCTTGCTTCTTTGATGGTCACATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGTAGCATTATTTCTATGCAGCTATGTTACGCTTCCAATATACGCCCTTGTAAATCAGATGGGTTCAGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCATGAAATGGCAGGAAACGGCCAAGAAGAAGCGGGCTAAACGAGCCTCAGCAACTAAAACCCTCGGAGGTAGTTCAAATGCTTCACCTCTACACTCATTGCGACGGTTTAAAACTACAGGACACTCCATACGTGTGCCTACGTATGAGGACCTTGAGTCATCTGATTACGAGGGGGATCCATTAGCAACACCTACACAAGCGTCAACAAGTGAATCGATTAATGTTGATGTAAAAGATGGAGATGAAATACAACAAATCGCTGAAACAGAGCAACCCCACAGTACAATTCAAACTAAAGAAGGAGATGAGTTCTCATTTATAAAGCCTGCAACACTAGGATAA 1710 42.34 MSVFCLCFCLLLTGAAASGGDGGSHSRDLDNTPTWAVAAVCFFFVLISIVLENVIHKLGTWLTKKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCRREEKNASTDEDEHHRRLQWLIRRSLAGGHNVVSCEDGKVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRIKIRGWKEWEQETSTHNYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYISCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPFLWSSFVIFLLLNLSGWHTLFWASFIPLLIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFSLFQNAFQTTYILSTLYSFGLNSCFFDGHILTIIKVGLGVVALFLCSYVTLPIYALVNQMGSGMKRSIFDEQTSKALMKWQETAKKKRAKRASATKTLGGSSNASPLHSLRRFKTTGHSIRVPTYEDLESSDYEGDPLATPTQASTSESINVDVKDGDEIQQIAETEQPHSTIQTKEGDEFSFIKPATLG* 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 258268 263733 - CsaV3_3G000150.1 Csa03g00015 520920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00015 569 MobiDBLite consensus disorder prediction 468 487 - -
Csa03g00015 569 MobiDBLite consensus disorder prediction 503 531 - -
Csa03g00015 569 PANTHER MLO-LIKE PROTEIN 32 542 - -
Csa03g00015 569 MobiDBLite consensus disorder prediction 515 530 - -
Csa03g00015 569 PANTHER MLO-LIKE PROTEIN 1 32 542 IPR004326 GO:0006952|GO:0016021
Csa03g00015 569 Pfam Mlo family 27 490 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00015 Csa-Chr3:258268 Csa06g01952 Csa-Chr6:17630672 0 dispersed
Csa03g00015 Csa-Chr3:258268 Csa06g03404 Csa-Chr6:28194532 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00015 K08472 - csv:101205522 1124.38