Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00073 ATGGAAGAAGAAGGACGATCCTTGGCCGTTACCCCCACTTGGGCTTTTGCCACAGTGGTCACTCTCATGGTTTCTCTTGGATTCTTCTTCCAAGGCACGTTGAAACGGACCAAAAAGTGGTTGAATAGGACGAAGAGAAAATCGTTACTTGCTGCGTTGGAGAAGATTAAAGAAGAGCTGATGCTCTTTGGACTTCTTTCGTTGTTGATGGGTCACTGGATTGTTTTTGTTGCAAGAATTTGTGTCAAGTCATCTGTCTTGAGCAGCCGTTTCTATCCTTGTGCGTTGGAGACTGATCTGAAACGAGTTAGACATATTTTCATTGCAACTCAAAGCTTGAACAGTTCTGTTCCAAGGGAGCACAATAACGATGGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCGTTTGCTTCATATGAAAGTTTAGAGCAGCTTCATCGACTAATATTCGTTCTCGGTGTCACCCATGTTTCATATAGCTTCATTGCCATTGCCCTGGCTATGATTAAGATATATGGCTGGAGGACGTGGGAAAATGAGGCTAAGGCTTTGGCCATTCGAAACGCCGAAGAAGAATCTGCACAAGCACCATCAACTGGACCAAACATAAGGCGACTATCAACTTTTATCTTTCACCATACTTCTCATCCATGGAGTCAGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATTAATCGAGCTGATTACATGGCTTTGCGGTTGGGATTTATCAGTACTCATGAACTTCCTATATCGTATGACTTCCACAATTATATGCTTCGAAGCATGGATGATGAATTTCGTGATATGGTTGGTATAAGTGTACCACTCTGGATATATGCCATTGCTTGCATCTTCCTCAACTTCCATGGAAGCAACATTTACATTTGGCTTTCCTTTGTCCCTGCAATTTTGATTCTGCTAATCGGGACGAAACTGCACCGGGTAGTGGTAAAGCTAGCTGTAGAAGTTGTGGATTCATCCCCAAGGGGATATTATTGTTTTAACTTGAGAGATGAGCTGTTTTGGTTTGGGAAGCCTAAGCTTCTTTTATGGTTGATACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAAGGAGCCTTCTTGTTTCATGGATAACGAAACCTATGTTGGTATCCGCTTGGCGTTTGGGGTTATCACTCAATTTTGGTGTAGCTTCATCACATTCCCACTCTATGTTATAGTAACTCAGATGGGGTCAAAAGTCAAGAAATCACTTGTGTCGGAGAATGTTCGAAACTCACTTCATCAATGGAAAAGAAGAGTGAAGGCAAGGCCAGGTGCTTCTTCAACGGTTACACTTGCGGGTGCAACATCACTTTCATCCTCTGTTTTTACAATGGATGATGAGGGTGAAGTGACCGACGACTTTACCACGAACTGCTCGGAAGGAAGCACATCAAATGCTGCTCAATGCACACATTTCCCCCAGTTAATTCAGCCAGTTTTGTCAGATGACACGGAAGTAGAAATATCTGTTAGTTCTAATTCTCCACACATTAGTTCCAACAACAGAAGTGAAGGCAATGGGGATGGTTGA 1617 42.86 MEEEGRSLAVTPTWAFATVVTLMVSLGFFFQGTLKRTKKWLNRTKRKSLLAALEKIKEELMLFGLLSLLMGHWIVFVARICVKSSVLSSRFYPCALETDLKRVRHIFIATQSLNSSVPREHNNDGIREYCPEGRESFASYESLEQLHRLIFVLGVTHVSYSFIAIALAMIKIYGWRTWENEAKALAIRNAEEESAQAPSTGPNIRRLSTFIFHHTSHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHELPISYDFHNYMLRSMDDEFRDMVGISVPLWIYAIACIFLNFHGSNIYIWLSFVPAILILLIGTKLHRVVVKLAVEVVDSSPRGYYCFNLRDELFWFGKPKLLLWLIQFISFQNAFEMATFIWSLWEIKEPSCFMDNETYVGIRLAFGVITQFWCSFITFPLYVIVTQMGSKVKKSLVSENVRNSLHQWKRRVKARPGASSTVTLAGATSLSSSVFTMDDEGEVTDDFTTNCSEGSTSNAAQCTHFPQLIQPVLSDDTEVEISVSSNSPHISSNNRSEGNGDG* 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 600368 604536 - CsaV3_3G000730.1 Csa03g00073 520978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00073 538 PANTHER MLO-LIKE PROTEIN 1 3 521 IPR004326 GO:0006952|GO:0016021
Csa03g00073 538 Pfam Mlo family 6 461 IPR004326 GO:0006952|GO:0016021
Csa03g00073 538 MobiDBLite consensus disorder prediction 517 538 - -
Csa03g00073 538 PANTHER MLO-LIKE PROTEIN 3 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00073 Csa-Chr3:600368 Csa03g01923 Csa-Chr3:15003227 0 dispersed
Csa03g00073 Csa-Chr3:600368 Csa06g01679 Csa-Chr6:14713131 2.50E-94 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00073 K08472 - csv:101217051 1069.3