Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00075 ATGGCTTCCATTTCTTCCTCTCTTCTGGTTTCTCTCTTCCTCTTCTTCCCTTTCATTTCAGGTGTAAATTCATCAACCTTCACCATTTTAAATCAATGTGATTACACGGTGTGGCCGGGAGTTTTGTCCGGCGCTGGCACATCACAGCTCTCCACCACCGGCTTCGTTCTTGAGAAAGGTCAGTCCAACGCTATCACCATGCCGCCAGGATGGTCCGGCCGCATTTGGGGTCGGACTTATTGCTCCCAAGATGCCACCGGCAGGTTCTCCTGTGCCACTGCCGACTGCGGCTCCGGCATCGTCGAATGCAACGGTGCTGGAGCTACCCCGCCCGCCACCCTTGCTGAGTTCACGCTCAACGGTGCAAGCGGGCTCGATTTTTACGATGTCAGCCTTGTAGATGGCTACAATGTGCCCATGTTAATCACCCCACAAGACGGAACAGGTGGGGGAAATTGCACAACAATTGGATGTGCAACAGATTTAAACAACGAATGTCCAGCAGAACTAAGAGTGGTGGCGAGCGACGGAGGTGGAAGAAGTGTAGCATGTAAAAGCGCATGTGAAGCTTTTGGTGAAGCACAATATTGTTGTAGCGGTGAATATGGAAATCCAAACACTTGTAGACCCTCATCTTATTCACAGTTCTTCAAATCTGCATGTCCACAAGCTTATAGTTATGCCTACGACGACGGTACCAGCACATTCACTTGCACTGCTGCCAATTACCTCATCACCTTTTGTCCTTCTCTTTCCACCAGTTTGAAGTCATCAAACGGGCAGTACCCACGGGCAGTGGACATCTCAAGAGCTCACAATTTGGGCAGACCCTCAGCCACCTCAATCGCCGTTATCTCCACCGTCACCGCAACTCTCAGTCGGCCATTTTTGCGTCTCTTTTAA 903 50.5 MASISSSLLVSLFLFFPFISGVNSSTFTILNQCDYTVWPGVLSGAGTSQLSTTGFVLEKGQSNAITMPPGWSGRIWGRTYCSQDATGRFSCATADCGSGIVECNGAGATPPATLAEFTLNGASGLDFYDVSLVDGYNVPMLITPQDGTGGGNCTTIGCATDLNNECPAELRVVASDGGGRSVACKSACEAFGEAQYCCSGEYGNPNTCRPSSYSQFFKSACPQAYSYAYDDGTSTFTCTAANYLITFCPSLSTSLKSSNGQYPRAVDISRAHNLGRPSATSIAVISTVTATLSRPFLRLF* 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 614891 617541 - CsaV3_3G000750.1 Csa03g00075 520980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00075 300 PANTHER OS09G0536300 PROTEIN 7 264 - -
Csa03g00075 300 PIRSF PR5 1 293 IPR001938 -
Csa03g00075 300 CDD TLP-PA 26 248 - -
Csa03g00075 300 Pfam Thaumatin family 31 249 IPR001938 -
Csa03g00075 300 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Csa03g00075 300 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Csa03g00075 300 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Csa03g00075 300 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Csa03g00075 300 SMART tha2 27 249 IPR001938 -
Csa03g00075 300 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Csa03g00075 300 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Csa03g00075 300 ProSiteProfiles Thaumatin family profile. 24 249 IPR001938 -
Csa03g00075 300 Gene3D Thaumatin 25 249 IPR037176 -
Csa03g00075 300 PANTHER OS03G0233200 PROTEIN 7 264 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02140 Csa-Chr2:19375453 Csa03g00075 Csa-Chr3:614891 2.27E-108 dispersed
Csa03g00075 Csa-Chr3:614891 Csa03g00099 Csa-Chr3:781308 3.51E-122 dispersed
Csa05g00314 Csa-Chr5:1961108 Csa03g00075 Csa-Chr3:614891 7.68E-52 dispersed
Csa03g00074 Csa-Chr3:606537 Csa03g00075 Csa-Chr3:614891 1.01E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00075 - - csv:101216818 601.282