Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00242 ATGTGCCATGATAATTTCCACGTGCATTCTTTAGAAGAGGCAACGACAGCTGAAGATAGTCTCCTAATATATTGCAAACCAGTTGAACTATACAACATTCTTCATCTTCGTTCCCTTAACAATCCTTCTTTTCTTCGACGTTGTTTGCATTACAAGTTACAAGCTAGGCGAAAAGAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTATAGGGACTACAACAACATAGTTCGAAAAACTGAAGTGACCGAAGACTTCTCATGTCCATTTTGTTTGATGCTATGCGCAAGCTTTAAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCAGTAAACGTCTCTGTGAAAGTTGATGTCTTTAGACCTGAGAATGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAATTAAAGAACTCTATTCAGAATGGGAAGTATGTGCAGTTCTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAATGCTGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAAGGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCAGGTTTCTCAGTGGCTATCAATCAATCATCTACAGGTCCTGAATGTTATAAAGTACTTTCTGGAAATGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACGGTAGAACGAGATCCAAGAAACCGCATGCTTTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGCGAGGACGAAGTAGATGATGACATTGCTGATTTTGAAGATCGAAGGATGCTCGATGATTTCGTGGATGTCACCAAAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGTTGTTCCTTGCCAGCGTTATATTCCTTATCAATCCTTTCCTCTATACTGTTTAA 1125 41.87 MCHDNFHVHSLEEATTAEDSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARRKERVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKVDVFRPENVADGVDPQLQTFFFCTRPRKRKLKNSIQNGKYVQFLEMDSPGPATEGMHKGFVGHNADGVSCEKEGSHSFPIETYLQNAQQDGENIGPEGPSSMECIERVASSSNIPGFSVAINQSSTGPECYKVLSGNDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTKDEKRLMHLWNSFVRKQRLFLASVIFLINPFLYTV* 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1938453 1950717 + CsaV3_3G002420.1 Csa03g00242 521147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00242 374 Pfam VEFS-Box of polycomb protein 282 358 IPR019135 -
Csa03g00242 374 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 63 - -
Csa03g00242 374 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 60 358 - -
Csa03g00242 374 PANTHER POLYCOMB GROUP PROTEIN 60 358 - -
Csa03g00242 374 PANTHER POLYCOMB GROUP PROTEIN 1 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00242 Csa-Chr3:1938453 Csa04g00426 Csa-Chr4:2655729 5.19E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00242 - - csv:101204149 714.531