Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00357 ATGGCTTTCTGGGACGGAGCTCCATGTCTGGAAGAAGGTTCAATGGGTTTGCCCTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCATTCATTAGAAAAAGAATGGATAGGTATGGACCTATATTCAGAACAAGTTTGGTGGGAAGACCATTGATTGTCTCAACAGACCCCGACTTAAATCACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCGTTGCACGGATTCATGTATAAATATCTAAAGAATATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAAAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAAACAATGGTCATCGCATAACCCAGTTGAATTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCCGAGAATTTGAGAGACAACTTTGTTGCATTCATACAGGGCTTAATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGCAGGAAAAAAGCAATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGAACAAATCCAAGGAAACAACGAATAGATTTTTTTGATTTTGTTCTCGAAGAACTGGAGAAGGATGGAACTCTTCTTACTGAGGAAATTGCTTTGGACCTCATGTTCGTACTACTTTTTGCAAGCTTTGAAACTACATCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTTGAGGAATTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAATTTCAGATTCTAGGCTTACATGGGGGGAATACAAATCCATGACATTCACATTTCAGTTTATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATTTTTCGAAAAGCACTGAAAGATATCGAGTTTAAAGGATATACCATTCCATCTGGTTGGGCTGTTATGGTCTGCCCTCCAGCCGTGCACTTAAATCCAGAAAAGTACGTTGATCCCCTTGCTTTTAACCCGTGGCGATGGGAGAAATCTGAATTGAACGGAGGCTCTAAACATTTCATGGCTTTTGGTGGTGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTGTTTCTCCACTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGGGGCAACATCATTCGAACTCCCGGCTTACAGTTTCCCGATGGCTTCCATGTTCAGATAATGGAGAAATGA 1350 40.89 MAFWDGAPCLEEGSMGLPLLGETLQFFAPNTSSDIPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNHFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLKKMIPEVEAVATRRLKQWSSHNPVELKDKTASMIFDLTAKKLISYDSENSSENLRDNFVAFIQGLISFPLNVPGTAYNKCLQGRKKAMRMLKNMLQERRTNPRKQRIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRREISDSRLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALKDIEFKGYTIPSGWAVMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGGSKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIIRTPGLQFPDGFHVQIMEK* 450
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 2950595 2955708 - CsaV3_3G003570.1 Csa03g00357 521262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00357 449 Gene3D Cytochrome P450 7 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PANTHER CYTOCHROME P450 26 10 446 - -
Csa03g00357 449 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 392 401 IPR017972 GO:0005506|GO:0016705
Csa03g00357 449 SUPERFAMILY Cytochrome P450 13 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS P450 superfamily signature 390 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 Pfam Cytochrome P450 16 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS E-class P450 group IV signature 37 60 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS E-class P450 group IV signature 311 327 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS E-class P450 group IV signature 344 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS E-class P450 group IV signature 360 378 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS E-class P450 group IV signature 383 399 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PRINTS E-class P450 group IV signature 399 417 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00357 449 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 10 446 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00357 Csa-Chr3:2950595 Csa03g04039 Csa-Chr3:35281608 0 dispersed
Csa03g00357 Csa-Chr3:2950595 Csa03g04086 Csa-Chr3:35819170 3.79E-87 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00357 - - csv:101209473 890.567