Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g00357 | ATGGCTTTCTGGGACGGAGCTCCATGTCTGGAAGAAGGTTCAATGGGTTTGCCCTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCATTCATTAGAAAAAGAATGGATAGGTATGGACCTATATTCAGAACAAGTTTGGTGGGAAGACCATTGATTGTCTCAACAGACCCCGACTTAAATCACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCGTTGCACGGATTCATGTATAAATATCTAAAGAATATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAAAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAAACAATGGTCATCGCATAACCCAGTTGAATTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCCGAGAATTTGAGAGACAACTTTGTTGCATTCATACAGGGCTTAATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGCAGGAAAAAAGCAATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGAACAAATCCAAGGAAACAACGAATAGATTTTTTTGATTTTGTTCTCGAAGAACTGGAGAAGGATGGAACTCTTCTTACTGAGGAAATTGCTTTGGACCTCATGTTCGTACTACTTTTTGCAAGCTTTGAAACTACATCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTTGAGGAATTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAATTTCAGATTCTAGGCTTACATGGGGGGAATACAAATCCATGACATTCACATTTCAGTTTATCAATGAAACTGTGAGACTGGCAAATATAGTTCCAGGAATTTTTCGAAAAGCACTGAAAGATATCGAGTTTAAAGGATATACCATTCCATCTGGTTGGGCTGTTATGGTCTGCCCTCCAGCCGTGCACTTAAATCCAGAAAAGTACGTTGATCCCCTTGCTTTTAACCCGTGGCGATGGGAGAAATCTGAATTGAACGGAGGCTCTAAACATTTCATGGCTTTTGGTGGTGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTGTTTCTCCACTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGGGGCAACATCATTCGAACTCCCGGCTTACAGTTTCCCGATGGCTTCCATGTTCAGATAATGGAGAAATGA | 1350 | 40.89 | MAFWDGAPCLEEGSMGLPLLGETLQFFAPNTSSDIPPFIRKRMDRYGPIFRTSLVGRPLIVSTDPDLNHFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLKKMIPEVEAVATRRLKQWSSHNPVELKDKTASMIFDLTAKKLISYDSENSSENLRDNFVAFIQGLISFPLNVPGTAYNKCLQGRKKAMRMLKNMLQERRTNPRKQRIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRREISDSRLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALKDIEFKGYTIPSGWAVMVCPPAVHLNPEKYVDPLAFNPWRWEKSELNGGSKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIIRTPGLQFPDGFHVQIMEK* | 450 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2950595 | 2955708 | - | CsaV3_3G003570.1 | Csa03g00357 | 521262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g00357 | 449 | Gene3D | Cytochrome P450 | 7 | 448 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PANTHER | CYTOCHROME P450 26 | 10 | 446 | - | - | |
Csa03g00357 | 449 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 392 | 401 | IPR017972 | GO:0005506|GO:0016705 | |
Csa03g00357 | 449 | SUPERFAMILY | Cytochrome P450 | 13 | 445 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | P450 superfamily signature | 259 | 276 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | P450 superfamily signature | 316 | 327 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | P450 superfamily signature | 390 | 399 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | P450 superfamily signature | 399 | 410 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | Pfam | Cytochrome P450 | 16 | 431 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | E-class P450 group IV signature | 37 | 60 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | E-class P450 group IV signature | 311 | 327 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | E-class P450 group IV signature | 344 | 358 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | E-class P450 group IV signature | 360 | 378 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | E-class P450 group IV signature | 383 | 399 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PRINTS | E-class P450 group IV signature | 399 | 417 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g00357 | 449 | PANTHER | CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 | 10 | 446 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g00357 | Csa-Chr3:2950595 | Csa03g04039 | Csa-Chr3:35281608 | 0 | dispersed | |
Csa03g00357 | Csa-Chr3:2950595 | Csa03g04086 | Csa-Chr3:35819170 | 3.79E-87 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g00357 | - | - | csv:101209473 | 890.567 |