Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00360 ATGGGTTCTTGTCACTCGTCTCCTAAAAGGCGGCAGAGCAGAGGTGGGGTTTATTCTGCCGCCGCAGCGCCGGGAGAGGCTCCGACTGTTTCTACAACAGAGTCATTTTCTTCTTCTTCTTCTTCTTCATTTTTGTACTCGACGAAGCCGCGTTGGTGGAAGAAGAATTCGACTAAAACTTTTGGCGTTGCGGTTTGTTCAGAGAAGGTCCATGAATTCGAGGTTCCGGGGAGGATTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCTATGATTGTGCAGGAGAATTTCAGTTCAAAAAGAGATACAGTATTTTGTGGCGTATTTGATGGACATGGTCCTTTTGGACACATGGTTGCGAAAAAAGTTCGTGATACCCTCCCTCTAATCCTATGTACACAATGGACATCTAAATCAAATGAAGACCAAAGCAAAACGAGACATTCCCGAAGTTCAAATTCTGAAGATTCTGTTGCTCTAGAAGGAGATGAAGATTCTTACAAGTCATTGGAGGGCGAAGAAAATGAAAAATTCCCCAAGATGTTTTTACCACTCAAAGTATCTCTACTGAAGTCCTTCAAATTGATGGATAAAGAGTTGAAACTGCATCAAAAAATTGATTGTTTTTGCAGTGGATCTACGGCTGTGACTCTAATAAAGCAGGGTCAAAACCTCATACTTGGAAATGTTGGTGACTCGAGAGCAGTGCTGGCTACAATAGATGAAGACAACTCTTTGATTCCAATTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAGGTTGCACGATTCTGGTTGCCAAATAACGATTCGCCTGGTTTGGCGATGGCAAGAGCTTTTGGAGACTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCACCTTACCCCAAGAGATCAGTTTGTAATTCTGGCCACTGACGGGGTTTGGGATGTTCTTTCAAATAAAGAAGCTATCGAGATTGTTGCGTCAGCCCCTTCTCGAGAAACAGCAGCCAGAGCTCTTGTCGACTGTGCTGTTCGTGCATGGAGACTGAAATATCCCACATCCAAGAATGATGATTGCGCTGTTGTATGCCTCTTTCTCGAGTATGAGCCTGACGTAGATGAAAACACGGAAACTTGTGCAATGCCAGTGGAAGAGGTTCCGGCCACACCAAGCAACGACGCAAAAGACATCGAAGTTGATTTAGATGATTGTAGAACAACTGTTTTCGAGCAGTCAGGCACTGTACAAAGCTGTAATGAGATTGTACCTATCTCCGACTCAACGGATGAGAAGGTTGTAGCTGGAGGGCGAAACCGGTCAAAGAGAAGCTTAGCTGAGTGCATTTCAAATGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTTTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAATGGCTATGA 1572 44.47 MGSCHSSPKRRQSRGGVYSAAAAPGEAPTVSTTESFSSSSSSSFLYSTKPRWWKKNSTKTFGVAVCSEKVHEFEVPGRICSNGSSRIACLYTQQGKKGVNQDAMIVQENFSSKRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNEDQSKTRHSRSSNSEDSVALEGDEDSYKSLEGEENEKFPKMFLPLKVSLLKSFKLMDKELKLHQKIDCFCSGSTAVTLIKQGQNLILGNVGDSRAVLATIDEDNSLIPIQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARFWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRHLTPRDQFVILATDGVWDVLSNKEAIEIVASAPSRETAARALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPDVDENTETCAMPVEEVPATPSNDAKDIEVDLDDCRTTVFEQSGTVQSCNEIVPISDSTDEKVVAGGRNRSKRSLAECISNEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWL* 524
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 3006430 3014515 - CsaV3_3G003600.1 Csa03g00360 521265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00360 523 ProSiteProfiles PPM-type phosphatase domain profile. 87 402 IPR001932 -
Csa03g00360 523 Gene3D - 80 404 IPR036457 -
Csa03g00360 523 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 1 507 - -
Csa03g00360 523 SMART PP2C_4 76 400 IPR001932 -
Csa03g00360 523 MobiDBLite consensus disorder prediction 26 44 - -
Csa03g00360 523 MobiDBLite consensus disorder prediction 154 184 - -
Csa03g00360 523 MobiDBLite consensus disorder prediction 1 44 - -
Csa03g00360 523 SUPERFAMILY PP2C-like 81 403 IPR036457 -
Csa03g00360 523 PANTHER ALPHABET, ISOFORM E-RELATED 1 507 - -
Csa03g00360 523 CDD PP2Cc 86 402 IPR001932 -
Csa03g00360 523 Pfam Protein phosphatase 2C 101 381 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00360 Csa-Chr3:3006430 Csa06g00378 Csa-Chr6:3142443 1.80E-149 dispersed
Csa03g00360 Csa-Chr3:3006430 Csa02g00474 Csa-Chr2:3366498 1.09E-110 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00360 - - csv:101209961 1038.1