Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00420 ATGAAGATGAAGAGGAGGAGGGCGCTTGAAGTGCCTCCAAAAATTAGATCATTCATCAATAATGTCACGTCCGTTCCGCTTGAGGATATCGAAGAACCTCTAAAAGGTTTCGTTTGGGAATTTGATAAGGGGGATTTCCATCATTGGGTTGACCTCTTCAATCATTTTGATTCATTTTTTGAGAAGCATATAAAGACGAGGAAGGATTTGCAGGTTGAGGATAATTTTTTGGGATCCGATCCTCCATTTCCAAGAGAAGCCGTTCTTCAGATTCTGCGTGTCATAAGAATAATTTTAGGGAATTGTACTAATAAACACTTCTATAGCTCGTATGAGCAGCATCTGTCATGTCTTCTAGCTTCAACTGATGCCGATATAGTAGAGGCCTGCCTGCAGACTTTGTCTGCTTTTTTGAAGAAATCCATTGGGAAGTACTCCATTAGGGATGCTTCTTTGAACTCGAAGTTATTTGCTCTTGCACAAGGATGGGGAGGAAAGGAAGAAGGCCTTGGATTGATTGCATGTGCGTTGCAGAATGGTTGCAGCCAGGTTACTCATGAGTTGGGTTGCACTCTGCACTTTGAGTTCTATGCTTTAAATGAATCTGGAAGTGACATCACAGAGCAGTCGACCAAGGGTCTGCAAATCATTCATTTACCTAATGTGAGCTCCTGCCTAGAAACTGATTTAGAACTTCTAAGCAAGTTGATTGCAGAGTTCAATGTGCCAACTAGTTTGAGATTTTCTCTTCTGACAAGGATGCGATTTGCAAGAGCATTTCATTCTCTATCTGCTCGGCAGCAGTATACCTGCATTCGCCTGTATGCCTTCATTGTTCTTGTTCAAGCAAGTGGCGATGCTGAAGATCTAGTTAGTTTCTTTAACTCTGAGCCTGAGTTTGTAAATGAGTTAGTCGGCTTATTAAGCTATGAAGATGAAGTTCCTGTAAAAATACGAATCCATTGTCTATTATCATTGGTTGCACTTTGTCAAGACCGGTCGCGCCAACCAACTGTGTTGTCTGCAGTGACTTCTGGTGGGCACCGTGGCATCTTGTCCAGCCTCATGCAGAAGGCTGTCGATTCTGTGATTACTGATACTACAAACTGGTCGTTGCTTTTTGCTGAAACTTTGTTATCACTCGTTACTGTTTTGGTCTCATCATCATCGGGCTGCTCAGCCATGCGTGAAGCTGGGTTTATTCCTACTCTTCTGCCGCTCCTTAAAGATACCAATCCGCAACATTTGCATCTAGTCAGTACTGCTGTGCATATTTTAGAAGTTTTTATGGATTATAGCAATCCAGCTGCAGCATTATTTAGAGACTTGGGGGGATTGGATGATACTATTTCTCGCCTGAAGGTTGAGGTATCACATGTTGAGAATGGTTCAAAGCAACAGGGGGATGATGTTGAATATGGTGGGAGGAATTGGCAAGTTGGCATTGCTGCTGCTTCAGATTTGGATGACTTGAAGCCTTTCTACTCTGAAGCTTTACTATCATATCATCGGCGTTTGCTGATGAAAGCTTTACTTCGTGCTATATCCCTTGGAACTTATGCTCCTGGAAATACTGCCCGCTTCTATGGTTCTGAAGAGAATCTGTTGCCTCATTGTTTGTGCATAGTATTTAGAAGAGCCAAAGATTTTGGTGGAGGGGTTTTTTCACTTGCGGCTACTGTTATGAGTGATTTAATCCATAAAGACCCAACTTGTTTTCCTATCTTAGATGCTGCTGGTCTTCCTGCTGCCTTTCTTGATGCTGTAATGGATGGTGTTGTCTGCTCTGCAGAAGCGATTACATGCATTCCTCAGTGTCTGGATGCTTTATGTCTAAACAACAATGGCCTTCAAGCTGTTAAAGACCACAATGCTTTGAGGTGCTTTGTGAAAATATTTACTTCGAGAACTTATTTGCGTGCCCTTACTAGTGATGCTTCAGGATCGTTATCTAGTGGGCTTGATGAACTAATGCGTCATGCATCTTCTCTTCGTGGACCTGGAGTGGATATGTTGATAGAAATCTTGAGTTCCATAGTAAAAATTGGATCCCCAGTTGATGCTTGTACATCAACTGACCCGTCAAGCTCTTCTACTGCAGTTCCCATGGAGACTGATGTTGAAGAAAGGAAATCTGTCCTATCAGATGATAAGGGAACTGCTAAGATGGGAAACCTGGAGCAAAGTGCTGCTGAGGTATCTCTTGATCAATCTGTGACAAATCCAGAGTCGTTTCTCCCAGATTGTGTGAGCAATGCTGCTCGTCTTCTTGAAACAATTCTCCAAAATGCTGATACATGTCGCATATTTGTTGAGAAGAAGGGCATTGAAGCTGTTTTGCAGTTATTTACATTGCCTTTGATGCCCCCATCCGTGTCAGTTGGTCAGAGCATCTCTGTAGCCTTCAAAAACTTCTCACCTCAGCATTCAGCTTCTCTTGCTCGTGCAGTATGTACATTTTTGAGAGAGCAGCTGAAATCAACAAACGAGTTCTTGGTTTCTGTTGAAGGATCTCAGCTTGCTCTTGTTGAATCTTCGAAGCAAACTAGGGGCTTGAAACTTCTTTCCTGTCTTGAAAGTATACTGTGCTTATGCAACTTTTTGTTGAAGGGGACTACAACTTTGATTTCTGAGCTTGGAATTGCAGATGCTGATATATTGAAAGATATTGGATGCACTTATAGGGAGATAATTTGGCAAATTTCTTTGGATAATCATTCAAAGACAGATGATAAAAAAAGTGCTGATCAAGATCCAGAAAGTTCAGATGCAACTCCTTCGAATACCGGTGGAAGAGAGAGTGATGATGATACAAACATGCCAGTGGTGAGATATATGAATCCAGTTTCTCTTAGAAATGGTTCTCAAACTTTGTGGGGCGGGGAGCGTGAGTTTCTCTCTGTTGTTCGCTCTAGTGAAAGTCTCCATCGCCGTAGTCGACATGGGTTGACGCGTTTACGTGGTGGAAGAAGTGGACGACAACTAGAGCCTTTTCATATTGATTCTGAAGCATCTGGAATTTTAGAGACATCCTCTACTCCAGAGTTGAAAAAGAAAAGTCCTGAGGTTCTTGTCTCTGAAATTTTGAACAAGCTTGGTTCAACAATGCGTGCTTTCTTTACAGCTCTTGTCAAGGGCTTTACATCATCCAATCGTCGTAGAGTTGACTCTGGCTCATTGAGTTCTGCTTCAAAAGCTATCGGGACTGCTCTGTCCAAAATATTTCTTGATGCTCTTAGTTTCTCTGGGCATTCTGGTTCATCAGGGCTTGATATTTCCTTGCCAGTGAAGTGTCGATATCTTGGAAAGGTAGTGGATGATATGGCAGCACTTACATTTGATGGCAGAAAGCGAACTTGTTATTCGGCTATGGTTAATAACTTCTATGTTAATGGTACGTTCAAGGAGCTGATTACAACATTTGAGGCTACAAGTCAATTGTTATGGTCACTACCTTTTTCTGTTCAAAATTCGGCAGTTGATCATGAGAGGACAAATGAAGAAAGCAACTTGTCTCATAGTCCATGGCTATTTGATACGATACAGAGTTACTGCCGTGTACTTGAGTATTTTGTTAGTTCTACGCTACTTTTATCTCCAAATTCTGCCTCCCAAGTACAACAGCTCATTCAACCAGTGGCTGTTGGGCTGTCCATTGGATTATTTCCTGTGCCAAGGGACCCTGAAGTTTTTGTGCGGATGCTGCAGGCCCAAGTTCTAGATGTGTTACTTCCTGTCTGGAATCATCCCAATTTTCCAAACTGTAATTCATCATTCATTGCTTCCATTGTTTCTCTTGTTACACACATATATTCTGGTGTTGGAGATGTTAAACGCAATCGCACTGGAATTGCTGGCACCACTAACCCACGGTTCATTCCCCCACCACCTGATGAAGCTACTATTGCTACTATTGTTGAGATGGGTTTCACAAGGGCAAGAGCAGAGGAGGCATTGAGAAGGGTGGAAACAAATAGCGTTGAGATGGCAATGGAGTGGCTATTTAGTCATGCTGAGGATCCTGTGCAGGAGGATGATGAACTTGCTCGTGCACTTGCACTTTCATTGGGAAATTCATCAGAATCATCTAAAGTAGATAATGGCGACAAGCCTATGGATGTATTGGCAGATGTGGGACATGCAAAGGCACCTCCTGTTGATGATATTCTTGCTGCGTCAGTGAGATTATTTCAGAGCAGTGACACAATGGCATTCACATTAACAGATTTGCTTGTGACTCTTTGCAACCGGAACAAGGGTGAAGATCGCCCCAGAGTGATGTCTTATCTTATTCAGCAGTTAAAGCTTTGCCCCTTGGATTTTACAAAAGATAATGGAGCTTTAAGTATGTTGTCACATATTATTGCATTGCTTCTTTTTGAGGATGTGAATGCTCGTAAAATTGCTGCACAAGAGGGTATTGTGTCTACTGTTATAAATATCCTGACAAATTTCAAGTCTAGAAATGCTGCTGCACCTGAGGTTTTATTACCAAAATGTGTTAGTGCTTTATTGCTGATCTTGGACAGCATGTTACAGCGCAGACCCAAAATTAGTTCTGAAAATACTGATGCTTCTCCAGTGGGGCCTTCACCTGACTTGTCCGGTGGGGGGCAAACACCCATGTCTGCACCAACGTCTGCACCCATGTCCATTGGAGATGATAAATCTGACAAAAATGATAAAATTGCTTTAAATGCTGTTGATAAACAATCTGGGTCAGCATTTGAGCATGTACTGGGAAAGCCTACAGGTTATTTAACTGCTGAGGAGTGTAATGAGGTGATGTTACTTGCTTGTGACTTGATAAAACAACGTGTTCCAGGAGTGATCATGCAGGCTGTCCTACAATTATGTGCACGGTTGACAAAAATTCATGCTCTCGCTTTGCATTTTCTTGAAAATGGAGGTCTGGTTGAACTCTTTAATCTTCCAAGAAGTTGTTTCTTTCCTGGTTATGACACTCTTGCTTCTGCTATTGTTCGGCATCTTCTTGAAGACCCTCAGACACTTCAAACAGCTATGGAATTGGAAATACGACAAACCTTGGGTGGAAGCCGACATGCTGGACGCACATCTGCCCGCAATTTCTTGACTTCAATGGCAGCTGTTATTTCCAGAGATCCCATGGTTTTCATGAAAGCCTCAGCTGCAGTTTGTCAGTTGGAGACATCAGGTGGCCGTACCTTTGTTGTGTTATCAAAGGAGAAAGAGAAGGAGAAAGAAAAGGAGAAGGAGAGATCAAAAGTATCTGGAACGGAAGTTGGTTTATCTTCCACTGAAAGTGTGAAGATGTCTGAAAATAAGATTTTTGATGGATCGGCGAAATGCTCTAAAAATCACAAAAAGATTCCTGCAAATCTCACTCAAGTGATTGACCAACTTATTGAAATTGTTCTCAAGTACCCATTGACACAAAACCAGGTGGATTCTGTTAGTAATGTCTGTTCTATGGAAGTTGATGAACCTAATACCAAGGTAAAGGGGAAATCAAAAGTGGTGGATAAAAAAAATTCAGAGGATGAATCTGAAAAATCTACTGGACTGGCTAAAGTAACTTTTGTTCTCAAATTATTGAGCGACATCCTTCTGATGTATGTACATGCTGTAGGAGTCATTCTTAGACGTGACTCTGAAATGTGTCAACTTCGAGGCTGTAATCATTTGGATGGTGCTGGGCAAGGTGGGATTGTTTACCACATATTGCAACGGTTACTTCCTCTCTCAATTGATAAATCTGCAGGACCTGATGAATGGAGAGACAAGTTATCTGAGAAGGCTTCTTATTTTCTGGTGGTTCTTTGTGGTCGGTCTAGTGAAGGACGTAGACGAGTAATCAATGAGCTTGTGAAAGCCTTGTCTCTGTTTACCAACTCCGAAAGCAACAACTCAAATAAGAACATTGTCTTGCCTGATAAAAAGATTTTTGCTTTTTCTAATTTGGCTTATTCTATATTGTCCAAAAATTCGTCTTCCAGTAACATGCCAGGTTCAGGCTGCTCACCTGACATTGCTAAAAGCATGATAGATGGAGGAATGGTTCAATGTCTGACAAATATTTTACAAGTGGTTGATCTGGACCATCCTGATGCTCCTAAAATTGTTAACCTTATATTGAAGGCCCTGGAAAGTCTGACAAGGGCTGCCAATGCCAGTGAGCAAATAATGAAGTCTGATGGAATGGCCAAAAAAAAATCTTCAGGGTTAAGTGAAAGGCTTGATGATCAGGTAAATACAGTGTCAACTGATGAGACTGTTAGGGAAAATCAGAATGCTGGCAGTCAACAGTTAGTCAGAGAGGCAGTGGACAATAATCAGCAAGAGTTTGCTGCTACTCAAAATGATGGCAATATTAACACTCAAACAAATCGGTCCCTTGAGCAGGAAATGAGACTAGAAGTGGAAGGGACAATGGCTGCAAATGAACACATGGAGCTTGGAATGGAGTTTATGCGTGAAGAGATGGAAGAAGCTGGTGTCTTGCACAATTCTGACCAAATTGAGATGAACTTTCATGTAGAGAACAGGGCAGATGAGGAGATGGGTGATGAAGATGATGATGTGGGGGATGATGCAGAAGATGATGATGATGACGATGACGACGGAGAGGACGAGGATGAGGATATAGCAGAAGATGGTGGAGGAATGATGTCCCTTCCAGATACTGATGTGGAAGATCACGATGATACTAGACTGGCAGATGACTACAATGATGAAATGGTAGATGAAGAGGATGATGATTTTCATGAGAATAGAGTCAATGAGGTCAGGTGGAGGGAGGCTCTTGATGGACTGGATCATCTACAGGTACTTGGGCAGCCTGGAGGTGCTAGTGGGCTTGTTGATGTTGCCGCCGAACCTTTTGAAGGTGTAAATGTTGATGACCTTTTTGGTCTTCGCAGACCTTTAGGCTTTGAGCGCCGCCGTCAGACTGGTAGGTCCTCCTTTGAACGATCTGTTGTTGAAGTAAATGGTTTTCAACATCCCCTTCTTCTAAGGCCATCCCAGTCAGGAGATATGGTCTCAATGTGGTCATCTACCGGGAATGCATCTCGTGACTTGGATTCTTTATCAGCTGGGAGCTATGATGCATCCAACTTTTATGTGTTTGATGCTCCTGTTTTTCCATATGAACATATGGCAAATAGTTTATTTGGAGACAGATTTGGTGGTGCAGCTCCACCACCTTTGGCTGACTATCCTATTGGTATAGACTCATTGCCGTTAGCAGGAAGAAGAGGGGCAGGTGATGGCCGTTGGACTGATGATGGTCAACCACAAGGAGGTATTCAGGCTACTGCAGTTGCTCAGGCTGTTGAGGAACTGTTTGTATCTCATATGCATGGTATTGCGCCTGCTGAAAGACTACAACAGAATTCTGGAATGCATGATAAACAATTGGATACTCTTGCATCCAATAATAATCTAGTAGTAGCAGAATCTGGTAATGCTAGCAATCAACAAAACGATGACCAGAATCCAGATAACTCTGTTGAAGCCTTACACCATGAAACTAATATAACTGTTGAGAGTGGTATTTCCCATGGAGTTAATTCAGAATCTATAATTGAAGAAGCTGGGGAAAACGTGCAAGAGGATGAACCTATGTCTATTCAACCTCATGCACCGGATATTACATTGAATGAGCATGATAGGATGGACATGGGAGAACAAAATGGTGCTTCTGGTGAGCAGATTGAGACATTACCTCAGTTCGACAACCTGGAATGTGATGGAACTTCTGAAGTGCCTGCAGATCTTCATGAAATGCCGTCTCAGGGCATAGACTGTCCTGGATCTTCTGAAATGGATGCTGAGGCTGGGAATCATGTAATATCAGACTTTGGATTAGAGACATCCAATCTTGGTGATTGCCAGGTCTCTTCTGCTGGTGCTAGTGTTGATGTTGACATGAATGATAATGATGCTGAAGAAATTCTTACTGAGCAGCCTATTCTGACAACTGACGATAGTAGAGGTGGGTCAACTTCAGAGCAGAATGTGCTGGTTGCTCCGGATGTTAACCAGGCAGATCAAAGTAGTATGAGTAATGAAGCCTCTGGTGCCAATGCTATAGATCCTACATTCTTGGAGGCACTACCTGAGGACTTGCGTGCCGAAGTTCTTGCTTCACAGCAAGCTCAGCCCATTCAACCTCCTACTTATGCTCCACCCTCAGCAGATGATATTGATCCTGAATTTTTAGCTGCACTTCCTCCTGATATCCAGGCAGAAGTCTTGGCCCAGCAGAGAGCACAGAGGGTTGCTCAGCAGGCAGAGGGACAACCAGTTGACATGGATAATGCTTCGATCATTGCTACATTTCCTGCTGATTTGCGGGAAGAAGTTCTGTTAACTTCGTCAGAGGCAGTTTTGTCAGCACTCCCTTCTTCATTGCTAGCTGAAGCTCAAATGCTTAGAGATCGAGCAATGAGTCACTATCAGGCTCGTAGTCTCTTTGGTAGCAGCCATAGACTGGGCAATCGGAGGAATGGCCTGGGATTTGATAGGCAGACAGTGATGGACAGGGGTGTTGGAGTTACAATTGGTCGTAGAGCAGCTTCTGCCATTGCAGATAGCCTGAAGATGAAAGAAATTGAAGGCGAACCACTTCTGGATGGGAAGTCGTTAAAAGCTTTAATACGACTGCTAAGATTAGCTCAGCCGCTTGGAAAAGGACTATTGCAGAGACTTTTGTTTAACCTTTGTGCACATAGTGTTACAAGGGCAAGTCTGGTTTATCTATTACTGGATATGATCAAATCTGAGGCTGAAGGTTCTGTGGGTGGAGTTGCAACGATCAATTCTCAAAGGCTTTATGGTTGTCAGTCAAATGTTGTTTATGGTCGATCACAGTTATTGGATGGTCTTCCTCCTTTGATGTTGCGTCGTATACTTGAAATTTTAACTTATTTGGCAACAAATCATTCTGCTGTTGCCAATATGTTATTCTACTTTGATTTGGAGACTGTTCCTGAGGATTTGAGTTCTTCATGCATGGAAACTAAGAAGGGCAAAGAGAAAGTTGTGGAAGGACTTCCAGCAAGTAATTTAAAAACCTGTCAAGCTGTAAATATTCCTTTGGTTCAATTCTTGAAGCTTTTGAATCGACCGCTTTTCTTGCGTAGTGTTGTGCATCTTGAACAGGTCGTGAGCCTCCTTCAAGTAGTTGTTTATACTGCATCATCAAAACTGGAGCATCAGTCCCGATCTGAACAGGTAACAGGAAATTCCCCTATGTTACCTGTTGATGAAGCTAGTGGTGCAGTTTCAAAGGATCCTTCTTTGCCGGAAGGAGACTCAAAGCAAGATAATAGTGATGCTGCTGGATCTACTTCAGGTGGAAAAGGGAGTAATGACATACACAACATCTTTTTGCAACTGCCACATTCTGTTTTGTGCAATTTATGTGCACTGCTTGGCCGTGAGGGGCTTTCTGATAAAGTATACACACTTGCTGGTGAGGTACTGAAGAAGTTGTCCTCGGTTGCAGCACCCCACCGAAAATTCTTCATGTCAGAGCTCTCAGAACTAGCTAATGGGTTGAGCAGCTCTGCTATCAGCGAGCTTGTTACCTTGAAGAATACGAACATGTTAGGTTTAAGTGCCAGTTCAATGGCTGGGGCAGCGATTGTTCGTGTCCTGCAGGCTCTTAGTTCACTTACTTCCCCTTGTGTGAGGGAGACCAAAAGTTCAGAGTGTGATAGTGAATTAGAGGAGCAAGCCATCATGTGGAGGTTGAATGTTGCGCTAGAGCCATTGTGGCAAGCATTAAGTGACTGTATAAGTGTTACTGAGACACAACTGTCTCAGAGCTCCTCTTCAACTACCCCAATTAATGTTGGGGAGCAGCTTCAGGGCACTATCTCTTCCTCTCCTCTACCTCCTGGAGGTCAGAGACTCCTTCCATTTATTGAGGCTTTCTTTGTTTTGTCTGAAAAGCTTCAAGCAAATCTGTCAATTTTGCAACAAGACCATGCTAATATTACCGCAAGAGAGGTCAAAGAGTTTTCTGGAACTTCAGACACATTAAGCACAAAGGGTGCTGATTATCAGAAAAAGTCTGATGGTGCTGTAACGTTTACAAGGTTTGCTGAGAGGCATCGCCGTCTTTTGAATGCTTTTATCAGACAAAACCCGGGCTTAATGGAGAAGTCACTTTCGATATTGTTGAAGGCTCCTAGACTGATTGATTTCGATAATAAGAGAGCTTATTTCCGTTCAAGAATTAGGCAACAGAATGAGCAACATATTTCTGGTCCATTGCGGATTAGTGTTCGTCGGGCCTATGTTTTGGAGGATTCATACAATCAATTGCGTATGCGGCCAACTCAAGACTTGAGAGGGCGATTGAATGTGCAGTTTCAAGGTGAAGAGGGTATTGATGCTGGTGGCCTGACAAGAGAATGGTATCAGTTACTCTCTAGGGTTATATTTGACAAGGGAGCCTTGCTATTCACTACAGTTGGAAACAATGCAACTTTCCAGCCAAATCCAAATTCTGTCTACCAAACAGAACATCTTTCATACTTCAAGTTTGTCGGCCGCGTGGTTGCAAAGGCCCTGTTTGATGGGCAACTTTTGGATGTTTATTTCACAAGATCCTTTTACAAGCACATTCTTGGGGTTAAGGTGACTTACCATGACATAGAAGCTGTCGACCCTGATTACTATAAAAACTTGAAGTGGATGCTGGAGAACGATGTGAGTGACATTCCTGATCTCACATTTAGCATGGATGCAGATGAGGAGAAGCACATTCTTTATGAGAAAAATGAGGTCACTGATTATGAGCTTAAGCCTGGAGGAAGAAATATAAGAGTTACTGAAGAGACAAAGCATGAATATGTAGACCTTGTTGCAGATCATATTTTAACCAATGCTATCCGCCCTCAGATTAACTCATTTCTAGATGGTTTCACTGAGTTGGTGCCCAGAGAACTTATTTCTATTTTTAACGACAAGGAGCTTGAGTTACTCATCAGTGGACTTCCTGAAATTGATTTGGATGATTTGAAGGCGAACACAGAGTACACCGGCTACACAGCTGCATCAAGTGTTGTGCAGTGGTTTTGGGAGGTGGTTAAATCCTTTGGTAAGGAAGACATGGCAAGATTGCTGCAGTTTGTGACTGGAACATCAAAGGTTCCACTGGAGGGCTTTAAAGCTTTGCAAGGTATATCTGGACCTCAAAGGTTTCAGATTCACAAGGCATATGGAGCTCCTGATAGGCTGCCATCAGCCCATACATGCTTTAATCAACTAGATCTCCCTGAGTACTCATCGAAGGAGCAGCTTCAAGAACGCTTGCTTCTTGCCATTCATGAAGCCAGTGAAGGATTTGGCTTTGGCTAA 11355 42.69 MKMKRRRALEVPPKIRSFINNVTSVPLEDIEEPLKGFVWEFDKGDFHHWVDLFNHFDSFFEKHIKTRKDLQVEDNFLGSDPPFPREAVLQILRVIRIILGNCTNKHFYSSYEQHLSCLLASTDADIVEACLQTLSAFLKKSIGKYSIRDASLNSKLFALAQGWGGKEEGLGLIACALQNGCSQVTHELGCTLHFEFYALNESGSDITEQSTKGLQIIHLPNVSSCLETDLELLSKLIAEFNVPTSLRFSLLTRMRFARAFHSLSARQQYTCIRLYAFIVLVQASGDAEDLVSFFNSEPEFVNELVGLLSYEDEVPVKIRIHCLLSLVALCQDRSRQPTVLSAVTSGGHRGILSSLMQKAVDSVITDTTNWSLLFAETLLSLVTVLVSSSSGCSAMREAGFIPTLLPLLKDTNPQHLHLVSTAVHILEVFMDYSNPAAALFRDLGGLDDTISRLKVEVSHVENGSKQQGDDVEYGGRNWQVGIAAASDLDDLKPFYSEALLSYHRRLLMKALLRAISLGTYAPGNTARFYGSEENLLPHCLCIVFRRAKDFGGGVFSLAATVMSDLIHKDPTCFPILDAAGLPAAFLDAVMDGVVCSAEAITCIPQCLDALCLNNNGLQAVKDHNALRCFVKIFTSRTYLRALTSDASGSLSSGLDELMRHASSLRGPGVDMLIEILSSIVKIGSPVDACTSTDPSSSSTAVPMETDVEERKSVLSDDKGTAKMGNLEQSAAEVSLDQSVTNPESFLPDCVSNAARLLETILQNADTCRIFVEKKGIEAVLQLFTLPLMPPSVSVGQSISVAFKNFSPQHSASLARAVCTFLREQLKSTNEFLVSVEGSQLALVESSKQTRGLKLLSCLESILCLCNFLLKGTTTLISELGIADADILKDIGCTYREIIWQISLDNHSKTDDKKSADQDPESSDATPSNTGGRESDDDTNMPVVRYMNPVSLRNGSQTLWGGEREFLSVVRSSESLHRRSRHGLTRLRGGRSGRQLEPFHIDSEASGILETSSTPELKKKSPEVLVSEILNKLGSTMRAFFTALVKGFTSSNRRRVDSGSLSSASKAIGTALSKIFLDALSFSGHSGSSGLDISLPVKCRYLGKVVDDMAALTFDGRKRTCYSAMVNNFYVNGTFKELITTFEATSQLLWSLPFSVQNSAVDHERTNEESNLSHSPWLFDTIQSYCRVLEYFVSSTLLLSPNSASQVQQLIQPVAVGLSIGLFPVPRDPEVFVRMLQAQVLDVLLPVWNHPNFPNCNSSFIASIVSLVTHIYSGVGDVKRNRTGIAGTTNPRFIPPPPDEATIATIVEMGFTRARAEEALRRVETNSVEMAMEWLFSHAEDPVQEDDELARALALSLGNSSESSKVDNGDKPMDVLADVGHAKAPPVDDILAASVRLFQSSDTMAFTLTDLLVTLCNRNKGEDRPRVMSYLIQQLKLCPLDFTKDNGALSMLSHIIALLLFEDVNARKIAAQEGIVSTVINILTNFKSRNAAAPEVLLPKCVSALLLILDSMLQRRPKISSENTDASPVGPSPDLSGGGQTPMSAPTSAPMSIGDDKSDKNDKIALNAVDKQSGSAFEHVLGKPTGYLTAEECNEVMLLACDLIKQRVPGVIMQAVLQLCARLTKIHALALHFLENGGLVELFNLPRSCFFPGYDTLASAIVRHLLEDPQTLQTAMELEIRQTLGGSRHAGRTSARNFLTSMAAVISRDPMVFMKASAAVCQLETSGGRTFVVLSKEKEKEKEKEKERSKVSGTEVGLSSTESVKMSENKIFDGSAKCSKNHKKIPANLTQVIDQLIEIVLKYPLTQNQVDSVSNVCSMEVDEPNTKVKGKSKVVDKKNSEDESEKSTGLAKVTFVLKLLSDILLMYVHAVGVILRRDSEMCQLRGCNHLDGAGQGGIVYHILQRLLPLSIDKSAGPDEWRDKLSEKASYFLVVLCGRSSEGRRRVINELVKALSLFTNSESNNSNKNIVLPDKKIFAFSNLAYSILSKNSSSSNMPGSGCSPDIAKSMIDGGMVQCLTNILQVVDLDHPDAPKIVNLILKALESLTRAANASEQIMKSDGMAKKKSSGLSERLDDQVNTVSTDETVRENQNAGSQQLVREAVDNNQQEFAATQNDGNINTQTNRSLEQEMRLEVEGTMAANEHMELGMEFMREEMEEAGVLHNSDQIEMNFHVENRADEEMGDEDDDVGDDAEDDDDDDDDGEDEDEDIAEDGGGMMSLPDTDVEDHDDTRLADDYNDEMVDEEDDDFHENRVNEVRWREALDGLDHLQVLGQPGGASGLVDVAAEPFEGVNVDDLFGLRRPLGFERRRQTGRSSFERSVVEVNGFQHPLLLRPSQSGDMVSMWSSTGNASRDLDSLSAGSYDASNFYVFDAPVFPYEHMANSLFGDRFGGAAPPPLADYPIGIDSLPLAGRRGAGDGRWTDDGQPQGGIQATAVAQAVEELFVSHMHGIAPAERLQQNSGMHDKQLDTLASNNNLVVAESGNASNQQNDDQNPDNSVEALHHETNITVESGISHGVNSESIIEEAGENVQEDEPMSIQPHAPDITLNEHDRMDMGEQNGASGEQIETLPQFDNLECDGTSEVPADLHEMPSQGIDCPGSSEMDAEAGNHVISDFGLETSNLGDCQVSSAGASVDVDMNDNDAEEILTEQPILTTDDSRGGSTSEQNVLVAPDVNQADQSSMSNEASGANAIDPTFLEALPEDLRAEVLASQQAQPIQPPTYAPPSADDIDPEFLAALPPDIQAEVLAQQRAQRVAQQAEGQPVDMDNASIIATFPADLREEVLLTSSEAVLSALPSSLLAEAQMLRDRAMSHYQARSLFGSSHRLGNRRNGLGFDRQTVMDRGVGVTIGRRAASAIADSLKMKEIEGEPLLDGKSLKALIRLLRLAQPLGKGLLQRLLFNLCAHSVTRASLVYLLLDMIKSEAEGSVGGVATINSQRLYGCQSNVVYGRSQLLDGLPPLMLRRILEILTYLATNHSAVANMLFYFDLETVPEDLSSSCMETKKGKEKVVEGLPASNLKTCQAVNIPLVQFLKLLNRPLFLRSVVHLEQVVSLLQVVVYTASSKLEHQSRSEQVTGNSPMLPVDEASGAVSKDPSLPEGDSKQDNSDAAGSTSGGKGSNDIHNIFLQLPHSVLCNLCALLGREGLSDKVYTLAGEVLKKLSSVAAPHRKFFMSELSELANGLSSSAISELVTLKNTNMLGLSASSMAGAAIVRVLQALSSLTSPCVRETKSSECDSELEEQAIMWRLNVALEPLWQALSDCISVTETQLSQSSSSTTPINVGEQLQGTISSSPLPPGGQRLLPFIEAFFVLSEKLQANLSILQQDHANITAREVKEFSGTSDTLSTKGADYQKKSDGAVTFTRFAERHRRLLNAFIRQNPGLMEKSLSILLKAPRLIDFDNKRAYFRSRIRQQNEQHISGPLRISVRRAYVLEDSYNQLRMRPTQDLRGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNATFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKNEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTNAIRPQINSFLDGFTELVPRELISIFNDKELELLISGLPEIDLDDLKANTEYTGYTAASSVVQWFWEVVKSFGKEDMARLLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPDRLPSAHTCFNQLDLPEYSSKEQLQERLLLAIHEASEGFGFG* 3785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3559773 3575088 - CsaV3_3G004200.1 Csa03g00420 521325

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00420 3784 MobiDBLite consensus disorder prediction 1737 1758 - -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 3101 3115 - -
Csa03g00420 3784 CDD UBA_atUPL1_2_like 1300 1337 - -
Csa03g00420 3784 SMART hect_3 3441 3784 IPR000569 GO:0004842
Csa03g00420 3784 MobiDBLite consensus disorder prediction 920 935 - -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 2072 2093 - -
Csa03g00420 3784 SUPERFAMILY ARM repeat 76 514 IPR016024 -
Csa03g00420 3784 SUPERFAMILY UBA-like 1275 1345 IPR009060 GO:0005515
Csa03g00420 3784 Pfam Domain of Unknown Function (DUF913) 420 790 IPR010314 -
Csa03g00420 3784 Pfam Domain of Unknown Function (DUF908) 202 360 IPR010309 -
Csa03g00420 3784 Pfam Domain of Unknown Function (DUF908) 85 208 IPR010309 -
Csa03g00420 3784 Gene3D - 75 466 IPR011989 -
Csa03g00420 3784 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 8 2342 - -
Csa03g00420 3784 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 2411 3783 - -
Csa03g00420 3784 Pfam HECT-domain (ubiquitin-transferase) 3473 3783 IPR000569 GO:0004842
Csa03g00420 3784 Gene3D Hect, E3 ligase catalytic domain 3544 3628 - -
Csa03g00420 3784 Gene3D Hect, E3 ligase catalytic domains 3396 3661 - -
Csa03g00420 3784 SUPERFAMILY ARM repeat 738 2239 IPR016024 -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 907 941 - -
Csa03g00420 3784 SMART arm_5 388 431 IPR000225 GO:0005515
Csa03g00420 3784 SMART arm_5 2001 2047 IPR000225 GO:0005515
Csa03g00420 3784 SMART arm_5 763 807 IPR000225 GO:0005515
Csa03g00420 3784 CDD HECTc 3422 3782 IPR000569 GO:0004842
Csa03g00420 3784 SMART uba_6 1298 1336 IPR015940 -
Csa03g00420 3784 ProSiteProfiles HECT domain profile. 3443 3784 IPR000569 GO:0004842
Csa03g00420 3784 Pfam UBA/TS-N domain 1297 1334 IPR015940 -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 2179 2212 - -
Csa03g00420 3784 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1296 1337 IPR015940 -
Csa03g00420 3784 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL2-LIKE ISOFORM X1 2411 3783 - -
Csa03g00420 3784 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL2-LIKE ISOFORM X1 8 2342 - -
Csa03g00420 3784 SUPERFAMILY Hect, E3 ligase catalytic domain 3404 3776 IPR035983 GO:0004842
Csa03g00420 3784 MobiDBLite consensus disorder prediction 2058 2093 - -
Csa03g00420 3784 Pfam Ubiquitin binding region 2761 2791 IPR025527 -
Csa03g00420 3784 Pfam Ubiquitin binding region 2686 2714 IPR025527 -
Csa03g00420 3784 Pfam Ubiquitin binding region 2725 2754 IPR025527 -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 2175 2230 - -
Csa03g00420 3784 Gene3D - 1295 1368 - -
Csa03g00420 3784 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 1343 1362 IPR003903 -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 690 714 - -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 3068 3115 - -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 2575 2605 - -
Csa03g00420 3784 Gene3D Hect, E3 ligase catalytic domain 3665 3784 - -
Csa03g00420 3784 Coils Coil 3312 3332 - -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 1518 1557 - -
Csa03g00420 3784 Gene3D - 2722 2758 - -
Csa03g00420 3784 MobiDBLite consensus disorder prediction 1737 1751 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00420 - - - csv:101223063 7137.35
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02194 Csa-Chr2:19735105 Csa03g00420 Csa-Chr3:3559773 0 dispersed
Csa03g00420 Csa-Chr3:3559773 Csa03g03357 Csa-Chr3:30374999 1.14E-56 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g680 . . . . Bpe09g00120 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa03g00420 . . . . . . . . . . . . . . . . . Cpe14g00783 . Bhi11g00472 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005565 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 0 1 1 0 2 3 2 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa03g00420 Csa_Chr03 FPKM 2.518325 4.374422 0.0 0.0 2.55104 2.227276 2.608279 0.0 0.0 0.0