Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00595 ATGGCCGCCACTGCCGCCACCGCCACCCTCCTCCGGGCCACCCCTTTTCTTGGCCAGGCCAGAGCCTCTCCTCAAAACCCCCTCAGAGATGTCGTCGCCATGGGAACTGGAAAATACACCATGAGTAATGATTTGTGGTATGGACCCGATAGAGTTAAGTACTTGGGGCCGTTTTCAGCTCAGACTCCATCGTACTTGAACGGTGAGTTCCCTGGTGATTATGGATGGGACACTGCTGGCTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACCGAGCTCTTGAGGTAATCCACGGAAGGTGGGCAATGTTGGGCGCTTTGGGTTGCATAACACCCGAAGTCTTAGAAAAATGGCTTAAAGTGGACTTCAAGGAGCCAGTATGGTTCAAGGCAGGATCCCAAATCTTCACAGAAGGAGGTCTAGACTACTTAGGCAACCCGAACTTGGTCCACGCCCAAAGCATTCTAGCCGTGTTGGGGTTCCAAGTGGTCCTCATGGGTCTAGTAGAAGGGTTCCGCATCAACGGCCTTGATGGCGTCGGCGAGGGCAATGACCTGTACCCAGGCGGTCAATACTTTGACCCACTTGGACTGGCTGATGACCCTGTCACCTTCGCTGAGCTGAAGGTGAAGGAGATCAAGAATGGGCGTCTTGCCATGTTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTGACCGGAAAGGGTCCTCTTGAGAACCTTCTTGACCACCTTGATGACCCTGTGGCTAATAATGCTTGGGTTTATGCCACCAAGTTTGCCCCTGGCTCATAA 795 53.21 MAATAATATLLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPVANNAWVYATKFAPGS* 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5129160 5131051 + CsaV3_3G005950.1 Csa03g00595 521500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00595 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Csa03g00595 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
Csa03g00595 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 264 IPR001344 GO:0009765|GO:0016020
Csa03g00595 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Csa03g00595 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 264 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00595 Csa-Chr3:5129160 Csa07g00262 Csa-Chr7:2041428 1.03E-125 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00595 K08914 - csv:101207278 536.954