Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00597 ATGAGTTTCCTTGTGAGCAATTCTGGTGCTTTCATCATCAATTCCATCCAAATTTCAACCTCTAAACACCCTAACACCCCAGGTAAACATGTCATGCCCATGAAATTTCTTGGGACACAATCCGTAGCTGATGATCAATGTAAACATATTGAGCTGGTGAAGAATAGAAACAGCCGCAATTATTTTCAAGCTATGGCTTTTGTAAATGCCATTTCTGCAACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAACTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATGGGAGATTGGTTTGGAGGCATCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGGAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCAATTACCCTCATTCTTCAACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATTTAGCCGGGCTAACATTTGCTTTGGCTGCATCGCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCATCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTACGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCTGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCATTACTATTGGGTGGAGGTCTATATACGTTCCTGGACAGATTATTTCCAGTCACAATGGCAATGTAA 1071 44.63 MSFLVSNSGAFIINSIQISTSKHPNTPGKHVMPMKFLGTQSVADDQCKHIELVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM* 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5135428 5141637 + CsaV3_3G005970.1 Csa03g00597 521502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00597 356 Pfam Cytochrome C biogenesis protein transmembrane region 139 346 IPR003834 GO:0016020|GO:0017004
Csa03g00597 356 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 59 356 - -
Csa03g00597 356 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 59 356 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00597 - - csv:101206802 677.552