Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Csa03g00653	ATGGCTCTGGTTCTGCATTCTTGGACTCCTAGCAAAAATGTTTACAAGGTTTTAATAGCTGCGGAATACAATGGTGTCAAAGTTGACCTTGCCCCAGACTTCACTATGGGTGTAAGCAATAAGAGTCCTGAATTTCTCAAAATGAATCCTATTGGGAAGGTTCCTCTTCTGCAAACACCCGATGGTCCTATCTTTGAGAGCAATGCTATAACCCGCTATGTTGCTCGCTTGAAGGACAGCATTTTATTTGGCTCTTCTCCAATTGATTATGGACATGTTGAACAATGGATCGATTTCTCTTCATTGGAAATTGATATTCACATTTCGACTATTCTGGCGCCTAGATTTGGATATGGTGTTTACCATGCTCCTGCAGAAGAAGCTGCAAACGTTGCCCTAAAACGATCTTTCGGTGCTTTGGACTCCTACCTTGCTTCAAACACATTCCTCGTTGGACACTCTGTGACACTGGCTGATATTGTTTTGACGTGCAATCTCTATTATGGATTCGTCTATATTTTGCCTAAGAGCTTTACTTCTGCGTTTCCTCATGTCGAGAGGTACTTCTGGACATTGGTCAATCAACCAAATTTCAAAAAGGTAATTGGTGAGGTAAAGCAGACAGACGCCATCCCACCAGTGAAAACACCTGAGGAGGTTGCAGCAGCTGCCAAAGCAAAGGCTGAGCCCAAGAAACAAGAAGAGAAGCCTGCAGCACCTGCTGAGGAGGCACCAAAGCCCAAGGCCAAAAACCCTCTTGACTTGCTTCCTCCTAGTTCGATGATTTTGGATGAGTGGAAACGTCTCTACTCGAACACTAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCAGAAGGTTACTCCCTTTGGTTCTGTGACTACAAATACAACGACGAGAATACTGTTTCATTTGTGACTTTGAACAAAGTTGGTGGATTCCTCCAGAGAATGGATATTGCTAGGAAGTACGCATTTGGAAAGATGCTTGTGATCGGATCAGAGGCACCATACAAGGTGAAGGGACTATGGCTTTTCCGTGGAAAAGAAATCCCACAATTTGTGCTTGATGAGTGCTATGATATGGAGCTGTACGAGTGGAAGAAGGTGGATATCTCGGATGAAGCCCAGAAGGAGAGGGTGAGCCAAATGATTGAAGATCAGGAACCATTTGAGGGTGAAGCTCTTTTGGACGCCAAATGCTTTAAGTGA	1230	44.15	MALVLHSWTPSKNVYKVLIAAEYNGVKVDLAPDFTMGVSNKSPEFLKMNPIGKVPLLQTPDGPIFESNAITRYVARLKDSILFGSSPIDYGHVEQWIDFSSLEIDIHISTILAPRFGYGVYHAPAEEAANVALKRSFGALDSYLASNTFLVGHSVTLADIVLTCNLYYGFVYILPKSFTSAFPHVERYFWTLVNQPNFKKVIGEVKQTDAIPPVKTPEEVAAAAKAKAEPKKQEEKPAAPAEEAPKPKAKNPLDLLPPSSMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDIARKYAFGKMLVIGSEAPYKVKGLWLFRGKEIPQFVLDECYDMELYEWKKVDISDEAQKERVSQMIEDQEPFEGEALLDAKCFK*	410

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
3	5682858	5685853	-	CsaV3_3G006530.1	Csa03g00653	521558

Annotation

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Csa03g00653	409	Gene3D	Translation elongation factor EF1B, gamma chain, conserved domain	249	409	IPR036433	GO:0003746\|GO:0006414
Csa03g00653	409	SFLD	Glutathione Transferase (cytosolic)	3	189	IPR040079	-
Csa03g00653	409	CDD	GST_C_EF1Bgamma_like	89	209	-	-
Csa03g00653	409	Pfam	Glutathione S-transferase, N-terminal domain	2	76	IPR004045	-
Csa03g00653	409	SUPERFAMILY	Thioredoxin-like	2	77	IPR036249	-
Csa03g00653	409	SMART	EF1G_2	248	356	IPR001662	GO:0003746\|GO:0006414
Csa03g00653	409	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	86	214	IPR010987	-
Csa03g00653	409	PANTHER	ELONGATION FACTOR 1-GAMMA 1-RELATED	1	409	IPR044628	GO:0004364
Csa03g00653	409	MobiDBLite	consensus disorder prediction	223	249	-	-
Csa03g00653	409	Gene3D	Glutaredoxin	1	74	-	-
Csa03g00653	409	MobiDBLite	consensus disorder prediction	223	254	-	-
Csa03g00653	409	Pfam	Elongation factor 1 gamma, conserved domain	248	356	IPR001662	GO:0003746\|GO:0006414
Csa03g00653	409	Gene3D	-	80	212	-	-
Csa03g00653	409	Pfam	Glutathione S-transferase, C-terminal domain	122	196	IPR004046	-
Csa03g00653	409	SUPERFAMILY	GST C-terminal domain-like	73	210	IPR036282	-
Csa03g00653	409	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	1	82	IPR004045	-
Csa03g00653	409	CDD	GST_N_EF1Bgamma	3	77	-	-
Csa03g00653	409	SUPERFAMILY	eEF1-gamma domain	250	409	IPR036433	GO:0003746\|GO:0006414
Csa03g00653	409	SFLD	Main (cytGST)	3	189	-	-
Csa03g00653	409	ProSiteProfiles	Elongation factor 1 (EF-1) gamma C-terminal domain profile.	249	409	IPR001662	GO:0003746\|GO:0006414

Pathway

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Csa03g00653	K03233	EEF1G; elongation factor 1-gamma	-	csv:101207459	765.763

Dupl-types

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Csa03g00653	Csa-Chr3:5682858	Csa07g01815	Csa-Chr7:18386564	1.55E-12	dispersed
	Csa03g00652	Csa-Chr3:5678932	Csa03g00653	Csa-Chr3:5682858	0	tandem

Deco-Alignment

Select	Vvi1	Blo1	Blo2	Bda1	Bda2	Bpe1	Bpe2	Bma1	Bma2	Cmo1	Cmo2	Cma1	Cma2	Car1	Car2	Sed1	Cpe1	Cpe2	Bhi1	Tan1	Cmetu1	Lac1	Hepe1	Mch1	Lcy1	Cla1	Cam1	Cec1	Cco1	Clacu1	Cmu1	Cre1	Cone1	Cone2	Cone3	Cone4	Lsi1	Csa1	Chy1	Cme1	Blo3	Blo4	Bda3	Bda4	Bpe3	Bpe4	Bma3	Bma4	Sed2	Cmo3	Cmo4	Cma3	Cma4	Car3	Car4	Cpe3	Cpe4	Bhi2	Tan2	Cmetu2	Lac2	Hepe2	Mch2	Lcy2	Cla2	Cam2	Cec2	Cco2	Clacu2	Cmu2	Cre2	Lsi2	Csa2	Chy2	Cme2
	Vvi12g1175	Blo02g01196	Blo03g00287	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Cpe14g00666	.	.	.	.	.	.	.	Cla11g00054	Cam11g0057	Cec11g0066	Cco11g0074	Clacu11g0204	Cmu11g0056	Cre11g0556	Cone3ag0901	Cone10ag0874	.	.	.	.	.	Cme06g02163	.	.	.	.	.	.	.	.	.	Cmo04g00957	Cmo16g00830	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Csa03g00653	Chy06g01649	.

Syn-Families

Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	95.1	6.0e-253	869.8
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT5G60390	96.2	1.0e-252	869.0
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.9	1.0e-252	869.0
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.7	9.6e-251	862.4
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT5G60390	87.8	8.2e-226	779.6
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	95.1	6.0e-253	869.8
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07920	96.2	1.0e-252	869.0
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.9	1.0e-252	869.0
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.7	9.6e-251	862.4
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT1G07920	87.8	8.2e-226	779.6
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	79.8	9.0e-202	699.5
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07930	80.3	1.3e-200	695.7
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	79.1	1.7e-200	695.3
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.7	3.5e-198	687.6
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT1G07930	71.8	3.0e-173	604.7
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	95.1	6.0e-253	869.8
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07940	96.2	1.0e-252	869.0
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.9	1.0e-252	869.0
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.7	9.6e-251	862.4
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT1G07940	87.8	8.2e-226	779.6
Csa02g00348	.	1	719	Eukaryotic Initiation Factors Gene Family	AT3G02270	55.6	5.1e-179	624.8
Csa07g00372	.	1	114	Eukaryotic Initiation Factors Gene Family	AT4G27130	88.6	1.9e-54	208.4
Csa07g01094	.	1	113	Eukaryotic Initiation Factors Gene Family	AT4G27130	81.6	1.7e-47	185.3
Csa03g00511	.	1	113	Eukaryotic Initiation Factors Gene Family	AT4G27130	80.7	3.9e-47	184.1
Csa07g00372	.	1	114	Eukaryotic Initiation Factors Gene Family	AT5G54760	87.7	4.3e-54	207.2
Csa07g01094	.	1	113	Eukaryotic Initiation Factors Gene Family	AT5G54760	81.6	1.7e-47	185.3
Csa03g00511	.	1	113	Eukaryotic Initiation Factors Gene Family	AT5G54760	80.7	3.9e-47	184.1
Csa03g00511	.	1	113	Eukaryotic Initiation Factors Gene Family	AT5G54940	85.8	4.7e-53	203.8
Csa07g01094	.	1	113	Eukaryotic Initiation Factors Gene Family	AT5G54940	85.8	1.4e-52	202.2
Csa07g00372	.	1	114	Eukaryotic Initiation Factors Gene Family	AT5G54940	73.7	1.5e-43	172.2
Csa07g00372	.	1	114	Eukaryotic Initiation Factors Gene Family	AT1G54290	88.6	5.0e-55	210.3
Csa03g00511	.	1	113	Eukaryotic Initiation Factors Gene Family	AT1G54290	81.6	3.5e-48	187.6
Csa07g01094	.	1	113	Eukaryotic Initiation Factors Gene Family	AT1G54290	79.8	3.9e-47	184.1
Csa07g00303	.	1	128	Eukaryotic Initiation Factors Gene Family	AT5G35680	93.8	4.9e-66	247.3
Csa02g01358	.	1	128	Eukaryotic Initiation Factors Gene Family	AT5G35680	92.2	5.4e-65	243.8
Csa07g00303	.	1	146	Eukaryotic Initiation Factors Gene Family	AT2G04520	89.0	3.2e-70	261.2
Csa02g01358	.	1	146	Eukaryotic Initiation Factors Gene Family	AT2G04520	87.7	1.6e-69	258.8
Csa07g01148	.	1	225	Eukaryotic Initiation Factors Gene Family	AT2G40290	88.9	2.9e-116	414.8
Csa07g01148	.	1	345	Eukaryotic Initiation Factors Gene Family	AT5G05470	80.9	2.8e-157	551.6
Csa01g01437	.	1	268	Eukaryotic Initiation Factors Gene Family	AT5G20920	75.2	1.3e-109	392.9
Csa01g01437	.	115	255	Eukaryotic Initiation Factors Gene Family	AT5G01940	56.3	1.4e-38	156.8
Csa01g01437	.	119	262	Eukaryotic Initiation Factors Gene Family	AT3G07920	70.9	5.0e-56	214.2
Csa05g00952	.	1	465	Eukaryotic Initiation Factors Gene Family	AT1G04170	91.2	4.3e-246	847.0
Csa05g00952	.	4	465	Eukaryotic Initiation Factors Gene Family	AT4G18330	82.5	1.0e-218	756.1
Csa05g00952	.	93	463	Eukaryotic Initiation Factors Gene Family	AT2G18720	75.7	1.7e-163	572.4
Csa07g02308	.	1	395	Eukaryotic Initiation Factors Gene Family	AT1G53880	79.0	3.6e-169	591.3
Csa07g02308	.	1	326	Eukaryotic Initiation Factors Gene Family	AT1G72340	76.4	3.4e-133	471.5
Csa01g03001	.	56	378	Eukaryotic Initiation Factors Gene Family	AT2G05830	74.3	1.2e-133	473.0
Csa05g01660	.	1	409	Eukaryotic Initiation Factors Gene Family	AT3G07300	83.0	3.9e-182	634.4
Csa01g00355	.	1	646	Eukaryotic Initiation Factors Gene Family	AT5G38640	59.8	4.3e-196	681.4
Csa01g00356	.	1	652	Eukaryotic Initiation Factors Gene Family	AT5G38640	59.4	3.1e-194	675.2
Csa01g00355	.	320	643	Eukaryotic Initiation Factors Gene Family	AT2G44070	75.1	6.7e-140	493.8
Csa01g00356	.	329	649	Eukaryotic Initiation Factors Gene Family	AT2G44070	75.1	2.1e-138	488.8
Csa01g00355	.	1	575	Eukaryotic Initiation Factors Gene Family	AT1G48970	56.6	1.6e-166	583.2
Csa01g00356	.	1	584	Eukaryotic Initiation Factors Gene Family	AT1G48970	56.6	8.6e-165	577.4
Csa02g00348	.	1	719	Eukaryotic Initiation Factors Gene Family	AT2G34970	64.5	1.2e-234	809.7
Csa02g00348	.	1	719	Eukaryotic Initiation Factors Gene Family	AT3G02270	55.6	5.1e-179	624.8
Csa02g00348	.	1	719	Eukaryotic Initiation Factors Gene Family	AT4G18300	59.8	1.1e-203	706.8
Csa01g00518	.	120	1059	Eukaryotic Initiation Factors Gene Family	AT1G48410	83.6	0.0e+00	1569.3
Csa03g01284	.	119	1053	Eukaryotic Initiation Factors Gene Family	AT1G48410	72.0	0.0e+00	1344.7
Csa01g02097	.	2	702	Eukaryotic Initiation Factors Gene Family	AT1G48410	73.7	0.0e+00	1081.2
Csa04g01292	.	130	990	Eukaryotic Initiation Factors Gene Family	AT1G48410	60.1	2.4e-305	1045.0
Csa01g01424	.	124	985	Eukaryotic Initiation Factors Gene Family	AT1G48410	60.4	4.2e-305	1044.3
Csa03g01284	.	1	1053	Eukaryotic Initiation Factors Gene Family	AT5G43810	78.0	0.0e+00	1635.9
Csa01g00518	.	184	1059	Eukaryotic Initiation Factors Gene Family	AT5G43810	76.8	0.0e+00	1378.6
Csa01g02097	.	4	702	Eukaryotic Initiation Factors Gene Family	AT5G43810	79.3	0.0e+00	1164.4
Csa01g01424	.	128	985	Eukaryotic Initiation Factors Gene Family	AT5G43810	57.7	4.2e-291	997.7
Csa04g01292	.	134	990	Eukaryotic Initiation Factors Gene Family	AT5G43810	57.2	2.7e-290	995.0
Csa01g02616	.	1	807	Eukaryotic Initiation Factors Gene Family	AT4G11420	77.2	0.0e+00	1124.8
Csa01g02618	.	1	957	Eukaryotic Initiation Factors Gene Family	AT4G11420	69.7	0.0e+00	1122.5
Csa01g02617	.	1	953	Eukaryotic Initiation Factors Gene Family	AT4G11420	69.2	0.0e+00	1119.4
Csa07g01314	.	9	712	Eukaryotic Initiation Factors Gene Family	AT5G27640	76.3	0.0e+00	1126.3
Csa07g01031	.	5	712	Eukaryotic Initiation Factors Gene Family	AT5G27640	74.6	0.0e+00	1114.8
Csa07g01314	.	9	712	Eukaryotic Initiation Factors Gene Family	AT5G25780	74.8	0.0e+00	1107.0
Csa07g01031	.	9	712	Eukaryotic Initiation Factors Gene Family	AT5G25780	72.8	0.0e+00	1087.4
Csa03g01924	.	1	941	Eukaryotic Initiation Factors Gene Family	AT3G56150	68.4	0.0e+00	1153.3
Csa03g01924	.	3	859	Eukaryotic Initiation Factors Gene Family	AT3G22860	57.9	2.6e-254	875.2
Csa06g03874	.	5	535	Eukaryotic Initiation Factors Gene Family	AT4G20980	81.0	1.7e-255	878.6
Csa06g03874	.	5	535	Eukaryotic Initiation Factors Gene Family	AT5G44320	79.1	1.3e-247	852.4
Csa04g01747	.	3	438	Eukaryotic Initiation Factors Gene Family	AT3G57290	87.2	1.0e-228	789.3
Csa06g00168	.	2	286	Eukaryotic Initiation Factors Gene Family	AT2G39990	76.4	8.8e-128	453.4
Csa03g02049	.	4	289	Eukaryotic Initiation Factors Gene Family	AT3G11400	69.2	1.2e-117	419.9
Csa01g00509	.	8	290	Eukaryotic Initiation Factors Gene Family	AT3G11400	68.8	8.5e-116	413.7
Csa01g00509	.	9	287	Eukaryotic Initiation Factors Gene Family	AT5G06000	69.0	1.4e-107	386.3
Csa03g02049	.	2	286	Eukaryotic Initiation Factors Gene Family	AT5G06000	67.4	1.8e-107	386.0
Csa04g00335	.	88	338	Eukaryotic Initiation Factors Gene Family	AT1G10840	82.5	7.5e-120	426.8
Csa03g03805	.	1	247	Eukaryotic Initiation Factors Gene Family	AT2G46280	65.5	4.0e-92	334.7
Csa03g03805	.	1	327	Eukaryotic Initiation Factors Gene Family	AT2G46290	80.5	1.4e-159	559.3
Csa01g03025	.	1	232	Eukaryotic Initiation Factors Gene Family	AT4G33250	75.9	3.3e-98	354.8
Csa07g02378	.	1	391	Eukaryotic Initiation Factors Gene Family	AT3G13920	93.6	7.7e-210	726.5
Csa03g04064	.	271	661	Eukaryotic Initiation Factors Gene Family	AT3G13920	92.6	3.2e-208	721.1
Csa03g02840	.	38	388	Eukaryotic Initiation Factors Gene Family	AT3G13920	67.5	6.2e-135	477.6
Csa07g02378	.	1	414	Eukaryotic Initiation Factors Gene Family	AT1G72730	89.9	4.2e-216	747.3
Csa03g04064	.	271	684	Eukaryotic Initiation Factors Gene Family	AT1G72730	89.2	4.6e-215	743.8
Csa03g02840	.	38	411	Eukaryotic Initiation Factors Gene Family	AT1G72730	65.0	6.4e-140	494.2
Csa03g02840	.	22	411	Eukaryotic Initiation Factors Gene Family	AT3G19760	88.7	8.3e-201	696.4
Csa07g02378	.	37	414	Eukaryotic Initiation Factors Gene Family	AT3G19760	64.3	8.2e-140	493.8
Csa03g04064	.	307	684	Eukaryotic Initiation Factors Gene Family	AT3G19760	63.8	9.0e-139	490.3
Csa02g02384	.	1	428	Eukaryotic Initiation Factors Gene Family	AT5G11200	86.0	1.7e-226	781.9
Csa02g02384	.	84	428	Eukaryotic Initiation Factors Gene Family	AT5G11170	95.1	9.5e-190	659.4
Csa02g01779	.	1	532	Eukaryotic Initiation Factors Gene Family	AT3G26400	50.7	4.7e-103	372.1
Csa02g01779	.	1	532	Eukaryotic Initiation Factors Gene Family	AT1G13020	50.6	1.2e-109	394.0
Csa02g01360	CCT	2	389	Eukaryotic Initiation Factors Gene Family	AT4G38710	55.0	3.4e-73	272.7
Csa01g02275	.	1	236	Eukaryotic Initiation Factors Gene Family	AT4G18040	67.5	1.4e-91	332.8
Csa02g01033	.	25	204	Eukaryotic Initiation Factors Gene Family	AT4G18040	53.6	1.0e-57	220.3
Csa01g02275	.	48	236	Eukaryotic Initiation Factors Gene Family	AT1G29590	61.9	1.9e-72	269.2
Csa02g01033	.	28	204	Eukaryotic Initiation Factors Gene Family	AT1G29590	52.2	4.0e-54	208.4
Csa01g02275	.	48	236	Eukaryotic Initiation Factors Gene Family	AT1G29550	62.4	1.1e-72	270.0
Csa02g01033	.	28	204	Eukaryotic Initiation Factors Gene Family	AT1G29550	51.7	1.5e-53	206.5
Csa02g01033	.	12	195	Eukaryotic Initiation Factors Gene Family	AT5G35620	69.1	3.0e-71	265.0
Csa01g02275	.	58	224	Eukaryotic Initiation Factors Gene Family	AT5G35620	55.2	5.9e-51	197.6
Csa03g04014	.	48	239	Eukaryotic Initiation Factors Gene Family	AT5G18110	84.9	4.6e-97	350.9
Csa01g01904	.	1	797	Eukaryotic Initiation Factors Gene Family	AT5G57870	62.8	1.1e-265	912.9
Csa04g02620	.	2	766	Eukaryotic Initiation Factors Gene Family	AT5G57870	57.8	8.3e-242	833.6
Csa01g01904	.	2	797	Eukaryotic Initiation Factors Gene Family	AT2G24050	55.0	2.3e-225	778.9
Csa04g02620	.	2	767	Eukaryotic Initiation Factors Gene Family	AT2G24050	56.3	6.6e-220	760.8
Csa01g01904	.	252	442	Eukaryotic Initiation Factors Gene Family	AT1G62410	51.8	1.5e-47	186.4
Csa01g01698	.	1	444	Eukaryotic Initiation Factors Gene Family	AT1G77840	60.9	3.2e-134	475.3
Csa01g01698	.	1	445	Eukaryotic Initiation Factors Gene Family	AT1G36730	69.1	5.7e-123	438.0
Csa04g02632	.	1	127	Eukaryotic Initiation Factors Gene Family	AT1G26630	85.0	1.2e-58	222.6
Csa05g02491	.	1	127	Eukaryotic Initiation Factors Gene Family	AT1G26630	83.5	3.5e-58	221.1
Csa01g01887	.	1	127	Eukaryotic Initiation Factors Gene Family	AT1G26630	81.9	6.6e-57	216.9
Csa02g02429	.	1	127	Eukaryotic Initiation Factors Gene Family	AT1G26630	79.5	3.6e-55	211.1
Csa02g02429	.	1	159	Eukaryotic Initiation Factors Gene Family	AT1G69410	86.2	1.9e-76	282.0
Csa05g02491	.	1	160	Eukaryotic Initiation Factors Gene Family	AT1G69410	83.8	5.5e-76	280.4
Csa04g02632	.	1	160	Eukaryotic Initiation Factors Gene Family	AT1G69410	85.6	1.2e-75	279.3
Csa01g01887	.	1	159	Eukaryotic Initiation Factors Gene Family	AT1G69410	84.3	4.7e-75	277.3
Csa04g02632	.	1	160	Eukaryotic Initiation Factors Gene Family	AT1G13950	90.0	7.7e-78	286.6
Csa01g01887	.	1	159	Eukaryotic Initiation Factors Gene Family	AT1G13950	86.8	9.4e-76	279.6
Csa02g02429	.	1	159	Eukaryotic Initiation Factors Gene Family	AT1G13950	88.1	1.6e-75	278.9
Csa05g02491	.	1	160	Eukaryotic Initiation Factors Gene Family	AT1G13950	86.3	2.7e-75	278.1
Csa07g01427	.	339	1361	Eukaryotic Initiation Factors Gene Family	AT1G76810	69.6	0.0e+00	1174.8
Csa07g01427	.	471	1361	Eukaryotic Initiation Factors Gene Family	AT1G21160	59.0	5.0e-269	924.5
Csa02g01643	.	1	246	Eukaryotic Initiation Factors Gene Family	AT3G55620	85.4	1.0e-121	433.0
Csa01g02776	.	118	358	Eukaryotic Initiation Factors Gene Family	AT3G55620	85.5	3.3e-120	427.9
Csa02g01643	.	1	246	Eukaryotic Initiation Factors Gene Family	AT2G39820	66.5	1.0e-92	336.7
Csa01g02776	.	122	358	Eukaryotic Initiation Factors Gene Family	AT2G39820	67.6	8.6e-92	333.6
Csa03g01837	.	15	652	Eukaryotic Initiation Factors Gene Family	AT2G23350	59.8	3.2e-202	701.8
Csa07g00747	.	5	647	Eukaryotic Initiation Factors Gene Family	AT2G23350	58.4	3.2e-202	701.8
Csa06g00488	.	36	633	Eukaryotic Initiation Factors Gene Family	AT2G23350	50.1	8.3e-150	527.7
Csa03g01837	.	18	649	Eukaryotic Initiation Factors Gene Family	AT4G34110	71.7	2.5e-252	868.2
Csa07g00747	.	1	644	Eukaryotic Initiation Factors Gene Family	AT4G34110	69.9	6.7e-250	860.1
Csa06g00488	.	21	651	Eukaryotic Initiation Factors Gene Family	AT4G34110	55.4	9.2e-175	610.5
Csa06g00488	.	1	633	Eukaryotic Initiation Factors Gene Family	AT1G22760	58.4	7.1e-194	674.1
Csa03g01837	.	29	625	Eukaryotic Initiation Factors Gene Family	AT1G22760	55.4	9.7e-167	583.9
Csa07g00747	.	26	625	Eukaryotic Initiation Factors Gene Family	AT1G22760	54.4	4.1e-165	578.6
Csa06g00488	.	34	635	Eukaryotic Initiation Factors Gene Family	AT1G71770	58.7	4.2e-189	658.3
Csa03g01837	.	29	628	Eukaryotic Initiation Factors Gene Family	AT1G71770	54.4	7.7e-167	584.3
Csa07g00747	.	26	625	Eukaryotic Initiation Factors Gene Family	AT1G71770	54.8	7.7e-167	584.3
Csa03g01837	.	28	653	Eukaryotic Initiation Factors Gene Family	AT1G49760	73.3	1.8e-256	882.1
Csa07g00747	.	25	647	Eukaryotic Initiation Factors Gene Family	AT1G49760	72.3	4.9e-251	864.0
Csa06g00488	.	34	650	Eukaryotic Initiation Factors Gene Family	AT1G49760	52.2	1.3e-163	573.5
Csa03g03337	.	533	1148	Eukaryotic Initiation Factors Gene Family	AT2G36660	50.9	4.5e-158	555.1
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	95.1	6.0e-253	869.8
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07920	96.2	1.0e-252	869.0
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.9	1.0e-252	869.0
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07920	94.7	9.6e-251	862.4
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT1G07920	87.8	8.2e-226	779.6
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	79.8	9.0e-202	699.5
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07930	80.3	1.3e-200	695.7
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	79.1	1.7e-200	695.3
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07930	78.7	3.5e-198	687.6
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT1G07930	71.8	3.0e-173	604.7
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	95.1	6.0e-253	869.8
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT1G07940	96.2	1.0e-252	869.0
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.9	1.0e-252	869.0
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT1G07940	94.7	9.6e-251	862.4
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT1G07940	87.8	8.2e-226	779.6
Csa05g01774	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	95.1	6.0e-253	869.8
Csa02g00945	.	1	446	Eukaryotic Initiation Factors Gene Family	AT5G60390	96.2	1.0e-252	869.0
Csa06g01672	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.9	1.0e-252	869.0
Csa05g01771	.	1	450	Eukaryotic Initiation Factors Gene Family	AT5G60390	94.7	9.6e-251	862.4
Csa05g01773	.	1	426	Eukaryotic Initiation Factors Gene Family	AT5G60390	87.8	8.2e-226	779.6
Csa01g00958	.	1	227	Eukaryotic Initiation Factors Gene Family	AT5G12110	55.0	1.4e-51	199.9
Csa06g00242	.	43	266	Eukaryotic Initiation Factors Gene Family	AT5G12110	53.0	4.6e-47	184.9
Csa01g00958	.	1	227	Eukaryotic Initiation Factors Gene Family	AT5G19510	64.3	1.8e-56	216.1
Csa06g00242	.	43	266	Eukaryotic Initiation Factors Gene Family	AT5G19510	61.5	1.6e-49	193.0
Csa06g00242	.	46	265	Eukaryotic Initiation Factors Gene Family	AT1G30230	79.0	4.4e-70	261.5
Csa01g00958	.	4	226	Eukaryotic Initiation Factors Gene Family	AT1G30230	75.1	3.7e-69	258.5
Csa06g00242	.	46	266	Eukaryotic Initiation Factors Gene Family	AT2G18110	81.3	2.9e-73	271.9
Csa01g00958	.	4	227	Eukaryotic Initiation Factors Gene Family	AT2G18110	76.1	3.5e-71	265.0
Csa03g00653	.	1	410	Eukaryotic Initiation Factors Gene Family	AT1G57720	70.5	2.7e-167	585.1
Csa03g00652	.	1	411	Eukaryotic Initiation Factors Gene Family	AT1G57720	76.3	5.2e-166	580.9
Csa06g01177	.	1	844	Eukaryotic Initiation Factors Gene Family	AT1G56070	93.8	0.0e+00	1602.4
Csa06g01377	.	1	844	Eukaryotic Initiation Factors Gene Family	AT1G56070	93.7	0.0e+00	1599.3
Csa06g01375	.	1	814	Eukaryotic Initiation Factors Gene Family	AT1G56070	90.3	0.0e+00	1525.0
Csa07g01078	.	1	1036	Eukaryotic Initiation Factors Gene Family	AT3G22980	71.3	0.0e+00	1450.3
Csa04g01462	.	1	434	Eukaryotic Initiation Factors Gene Family	AT5G47880	88.2	2.4e-222	768.1
Csa06g00762	.	1	434	Eukaryotic Initiation Factors Gene Family	AT5G47880	88.0	1.2e-221	765.8
Csa04g01462	.	4	437	Eukaryotic Initiation Factors Gene Family	AT1G12920	89.4	1.1e-227	785.8
Csa06g00762	.	4	437	Eukaryotic Initiation Factors Gene Family	AT1G12920	88.9	7.2e-227	783.1
Csa04g01462	.	1	437	Eukaryotic Initiation Factors Gene Family	AT3G26618	90.6	3.1e-230	794.3
Csa06g00762	.	1	437	Eukaryotic Initiation Factors Gene Family	AT3G26618	90.4	9.1e-230	792.7
Csa03g04393	.	1	784	Eukaryotic Initiation Factors Gene Family	AT5G10630	52.2	7.0e-205	710.7

Syn-Orthogroups

Select	Orthogroup	Bda	Bhi	Blo	Bma	Bpe	Cam	Car	Cco	Cec	Chy	Cla	Clacu	Cma	Cme	Cmetu	Cmo	Cmu	Cone	Cpe	Cre	Csa	HCH	Hepe	Lac	Lcy	Lsi	Mch	Sed	Tan	Vvi	Total
	OG0001474	2	4	2	1	2	2	4	2	2	2	2	2	4	3	3	3	2	2	3	2	2	3	2	2	2	2	1	6	2	2	73

Transcriptome

Select	Gene	Chr	Type	da1	da2	da3	da4	da5	da6	da7	da8	da9	da10
	Csa03g00653	Csa_Chr03	FPKM	96.988098	105.937874	104.161224	104.014244	58.527321	63.500088	56.244354	64.369781	62.027309	60.943714