Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00681 ATGGACGGTGAGGCGGTGGCCAGAGCTGTGGAAGGCTGCAAGGGAGTATTCCATATCGCATCCCCCTGTACATTGGAGGATCCGGTTGATCCACAGAAAGAATTGGTGGAGCCGGCGGTTCAAGGCACTGTGAATGTTCTTAATGCGGCGAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCGGCTCTTGTCCCTAATCCTGGTTGGCCGTCCCACATGCCTTTTGATGAATCTTCATGGACGGACCTGGAGTACTGCATATCCCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGCAGAGAATCATGGACTGGATGTTGTTTCCATCTTGCCAGCCACATGTCTTGGTCCTCTTTTACAACCCACTTTGAATGCAAGTTGTGCTGTATTGCAGCAGTTGCTCCATGGATCCCAGGATACTCAGGAATATCATTGGTTGGGTGCTGTACATGTCAAAGATGTTGCAAAAGCACAAATTTTATTGTTCGAGTCTCCTACTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGAGTTTGCAGACAAAGTTGCGAAAATCTGCCCTCAATTTCCAGTTCACAGATTTGTTGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCGAAGAAGTTAATTGATCTGGGACTTGTTTTCACTCCTCTTGAAGTTGCCATTCAAGATACGGTTGAGAGTCTTAGAAGCAAAGGCTTTTTGAATCAGTGA 777 45.82 MDGEAVARAVEGCKGVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVRRVVLTSSISALVPNPGWPSHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHGLDVVSILPATCLGPLLQPTLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFESPTSGRYLCTNGIYQFSEFADKVAKICPQFPVHRFVGETQPGLVACKDAAKKLIDLGLVFTPLEVAIQDTVESLRSKGFLNQ* 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6027368 6030202 + CsaV3_3G006810.1 Csa03g00681 521586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00681 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 251 IPR036291 -
Csa03g00681 258 Pfam NAD dependent epimerase/dehydratase family 2 181 IPR001509 -
Csa03g00681 258 CDD FR_SDR_e 1 234 - -
Csa03g00681 258 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 2 244 - -
Csa03g00681 258 Gene3D - 1 258 - -
Csa03g00681 258 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 244 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00681 Csa-Chr3:6027368 Csa03g02980 Csa-Chr3:28404767 2.43E-64 dispersed
Csa03g00681 Csa-Chr3:6027368 Csa03g02977 Csa-Chr3:28388659 6.94E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00681 - - csv:101213078 528.48