Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00948 ATGACTGACCTTGCTCGAAAGCATAAAACATACAAGCTTCTTGGGCCCTTCAGGGATGAGGTTTATACTTCTGACCCACCAAATGTTGAGTATATGCTCAGAACCAACTTCGAGAATTTTGGCAAGGGATCACATAACTACAGAATTCTCAGAGATCTTCTTGGCGATGGAATTTTCACAGTTGATGGAGAGAAGTGGCGTGAGCAGAGAAAGATTTCAAGCTATGAGTTCTCTACAAAAGTTCTGAGGGATTACAGCACTGTCATCTTCCGGAAAACTGCAGTTAAACTCGCTAACATCGTGTCCGAAGCTGCTATTTCGAATCGAGTAATTGATATTCAAGATCTATTTATGAAATCAACTCTAGATTCAATATTTCATGTTTCATTTGGAATTGATCTAGAGAGCTTGCATGGATCAAATGAAGAAATTAGCAAGTTTTGCTCTGCTTTTGAAGCATCAAGTACAAATACACTCTGGCGATACGTCGATGTATCCTGGCCAATCAAGAAGGCTCTCAATATTGGCTCAGAAGCTGTCTTAAAAGAAAACATGAAAATTGTTGATGAGTACATTTATAAGCTCATTCATAGTGCACTTGAACAGAGACAAAAGTTAGGCGACAACGCTTTGATGAGAAGAGAAAACATAGTGTCGAGGTTTCTGCAAGCGGAAACGACCGATCCAAAGTATCTAAGAGATATTATTCTTAATTTTGTTATAGCTGGAAAGGACACAACAGCAGTTACTCTTGCTTGGTTCATTTGCATGCTTTGCAAGCATCCTTCAGTGCAGGAAAGGGTTGCTAGAGAGATCGAAGAAGTGACAAATGTTGGAGATGTAACCGATTTTTCCGAATTTGCTGCAAGATTGACCGAAGAAGCACTAGAGAAGATGCAATTTCTCATTGCAACTATTAATGAAACTCTTAGACTCTATCCTGCCGTCCCAGTGGATGCAAAGATTTGCTTTTCGGACGATACACTGCCGGATGGATTCAGTGTGAGGAAAGGAGATATGGTGTCGTACCAGCCATATGCAATGGGTAGGATGAAATTCATATGGGGTGACGATGCCGAGGAATTCCTACCAGAGAGATGGCTTGATGGAGATGGAAAGTTCCAGCCTCAGAGCCCTTTCAAATTTACAGCCTTTCAGGCGGGGCCTCGCATTTGTTTAGGAAAAGAGTTTGCTTACAGGCAGATAAAAATCTTCTCAGCTCTATTATTGATGTTTTTTAAGTTCAAAATGAGTGATGAGAAGAAAATTGTGGAGTATCAACCAATGATCAATCTTCTCATCAAAGGAGGCCTTCAAGTTTGTGCCATTCCTAGGCGTCCTCTTACTTAA 1350 40.67 MTDLARKHKTYKLLGPFRDEVYTSDPPNVEYMLRTNFENFGKGSHNYRILRDLLGDGIFTVDGEKWREQRKISSYEFSTKVLRDYSTVIFRKTAVKLANIVSEAAISNRVIDIQDLFMKSTLDSIFHVSFGIDLESLHGSNEEISKFCSAFEASSTNTLWRYVDVSWPIKKALNIGSEAVLKENMKIVDEYIYKLIHSALEQRQKLGDNALMRRENIVSRFLQAETTDPKYLRDIILNFVIAGKDTTAVTLAWFICMLCKHPSVQERVAREIEEVTNVGDVTDFSEFAARLTEEALEKMQFLIATINETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMKFIWGDDAEEFLPERWLDGDGKFQPQSPFKFTAFQAGPRICLGKEFAYRQIKIFSALLLMFFKFKMSDEKKIVEYQPMINLLIKGGLQVCAIPRRPLT* 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7723773 7727453 + CsaV3_3G009480.1 Csa03g00948 521853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00948 449 Gene3D Cytochrome P450 2 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PANTHER CYTOCHROME P450 1 446 - -
Csa03g00948 449 Pfam Cytochrome P450 2 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 SUPERFAMILY Cytochrome P450 10 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS E-class P450 group I signature 231 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00948 449 PANTHER CYTOCHROME P450-RELATED 1 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00948 Csa-Chr3:7723773 Csa03g03688 Csa-Chr3:32808195 2.54E-99 dispersed
Csa03g00948 Csa-Chr3:7723773 Csa03g00951 Csa-Chr3:7764432 8.56E-166 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00948 - - csv:101210237 900.197