Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g00951 ATGGAACTGATCAATTTCAATATCATCACCTTCTTCTCCATCCTTCTCTGCCTCTTATTCCTCTCCTTCTTCATTCTCCTCCTCAAAACCCTATCCGGAAAGTCCATAACCAACTCCGACTACTCACCGGTGTACGGCACCATCTACGGCCAGGCTTTCTACTTCAACAACCTGTACGATCATCTTACGGCGGTGGCGAAGCGGCACAGAACCTTCCGACTGATCGGAGCGTCGTACAGCGAGATATATACAGTGAATCCGAGAAACATCGAGCATATATTGAAGACAAAATTCGAGAAGTATATGAAAGGAAGTAAGGATCAAGAAGTGGGTGGGGATTTGTTCGGAGAGGGAATATTTGCGGTGGATGGAGAAAAGTGGAAGGAGCAGAGGAAATTGGCTAGCTATGAATTATCGACGAAGATTCTTAGGGATTTTAGCTGCTCTGTTTTTAGAAGAAATGCCGAAAAACTCGTCGGAATTATTTCGGAGTTCTCCACCATGGCGCGAGTCTTCGATGTGCAGGATCTTCTAATGCGATGCTCTTTGGACTCCATTTTCAAAGTTGGCTTCGGTGTCGATTTGAACTGCGTGGAGGAACCAAGCAAAGCTGCAGGCAGGCGCGGGTTCATGGAGGCTTTCGATAATGCTAGCGCTCAGGTTTTTTGGCGCTTCATTGATCCTTTCTGGAAATTGAAAAGATTTCTCAACGTCGGTTCCGAAGCTTCGTTTAGGAACAACCTCAAAATAATCGATGCTTTTGTGCACCAGTTGATCAGTGCTAGGAGAAAATTGCTTCATCAACCAAATCTCAAGATTGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCAACAAGAATGAATGATCAATATCTAAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAGGGATACAAGTGCAGGAACTCTATCTTGGTTCTTCTATATGCTATGCAAGAACCCTTTAATACAGGAAAAAGTTGCAGAAGAAGTGAGCCAAATTGTTGGGGTTCAAGGGGAAGAAACTGACATACATTTGTTCATACAAAACTTAACTGATTCAGCTCTCGATAAAATGCACTATCTTCATGCAGCATTGACAGAGACTCTAAGGCTCTATCCTGCAGTCCCTGTTGATGGAAGGACTGCAGAAATAGACGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTATACTACTTGGCCTATTCCATGGGCAGAATGCCTTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCTGAGAGATGGCTTGAAAATGGAACTTTTCGACCTGAATCACCTTTCAAATTCATCGCATTCCATGCGGGTCCTCGAATGTGTTTGGGGAAGGACTTTGCTTATCGACAAATGAAGATAGTATCTGCTGCACTGCTTCAATTTTTTCGATTCAAGTTAGCCGATCCAACGAGGAATGTAACTTATAGGATCATGCTTACCCTTCACATAGATGGAGGGCTCCCACTTCTTGCACTACCGAGAGTAAGAAAATTTACATAA 1551 43.39 MELINFNIITFFSILLCLLFLSFFILLLKTLSGKSITNSDYSPVYGTIYGQAFYFNNLYDHLTAVAKRHRTFRLIGASYSEIYTVNPRNIEHILKTKFEKYMKGSKDQEVGGDLFGEGIFAVDGEKWKEQRKLASYELSTKILRDFSCSVFRRNAEKLVGIISEFSTMARVFDVQDLLMRCSLDSIFKVGFGVDLNCVEEPSKAAGRRGFMEAFDNASAQVFWRFIDPFWKLKRFLNVGSEASFRNNLKIIDAFVHQLISARRKLLHQPNLKIDKEDILSRFLMESEKDPTRMNDQYLRDIVLNFMLAGRDTSAGTLSWFFYMLCKNPLIQEKVAEEVSQIVGVQGEETDIHLFIQNLTDSALDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRMCLGKDFAYRQMKIVSAALLQFFRFKLADPTRNVTYRIMLTLHIDGGLPLLALPRVRKFT* 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7764432 7769429 + CsaV3_3G009510.1 Csa03g00951 521856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g00951 516 Gene3D Cytochrome P450 43 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PANTHER CYTOCHROME P450 6 513 - -
Csa03g00951 516 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 6 513 - -
Csa03g00951 516 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 Pfam Cytochrome P450 55 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g00951 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00863 Csa-Chr2:7968319 Csa03g00951 Csa-Chr3:7764432 1.62E-130 dispersed
Csa03g00951 Csa-Chr3:7764432 Csa07g01975 Csa-Chr7:19392733 3.93E-111 dispersed
Csa03g00948 Csa-Chr3:7723773 Csa03g00951 Csa-Chr3:7764432 8.56E-166 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g00951 - - csv:101210732 1009.21