Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01028 ATGGAGCAGAAGAATCCACATGGAAAAGGTGCGGATGCAGTTTTAAATCTTCAGCCAAACTCCTCGATCTCTATTGCATATCACTCACTCTTTGGTCCACATGATGATTTGGTACTTCTGGAGGTCGATGAAAAGCTTCTGGAAGAAGTCCTGCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCAGTCTTTTGCACAAAGTCGAAAACTTATGGAATCAAATACGTGGGAACTTCCAATTCTGTACTTCTTATACCGCCATCCGGTCGATCAGAATACTATACTAATGAGCTAGACAGCCATCAGAAGGACAACAGTAAAGAAGTTGCCCCTGTGATTAAAGTTGCTCCAGGTATCATGGAACTTCATGAGATTGCTCCAAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGGAACATTACAGCTTTGCCGATGAGTGGGAAAACGAAGCAGTGGACAAATATGAAAAGCGAATGTATAATTGGGATGATCTCATAAACAAGGTTCAGGCTAGTGACAATGAACTGAAAGCTGGATTACAAGCGCTTTCTGCAGTTGAGATTGATGGGTACTGGAGAATTGTGGATGAGAAATACATGGACTCCATGCTACAGATGCTTTTGCATAACAGGATTTTAAATGACTGGTCTCTAGATGCGCTTGATGAAGGTGTAATCATGAACGTGATGAAAATGGATGGTTTTCCTGAAAAACTTGTACAGCATTGTCTCCATGTTTATGGTGATAAATTGGATGAACATGAGGGGAAAAGTTGTTTATGGAGATTAAACGAGAAGCGGGTCTGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAAGGAAAGATGAAGCTAGAGCATCTCATGGATGAATGGAGGCAGAAAATCCCACTAGGAATGTGTGCCAACTTTGACATGTTGGAAGGTGAAGTTTTGACTGAGAGGCTTGGTGTTGAGACATGGGTTCGTGGTTTCCGAGTTTGTCAATTGCCATCAAATCCTGCCGAGCGATTCACCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAAGATTTGCAGCCCTACATCAGGGATCTTACAGTTCCAGGCCTTTCATCAGAAGGTTTGCTTCTCAAATACACCCGAAGAACTCAACCGAACCCCGAAGCAGAAGCTGTGTTCAGTGCAAGATAG 1182 42.72 MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAPGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPEKLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPLGMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR* 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8281996 8284781 - CsaV3_3G010280.1 Csa03g01028 521933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01028 393 Pfam Sister chromatid cohesion protein Dcc1 38 359 IPR019128 GO:0007064|GO:0031390
Csa03g01028 393 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 10 393 IPR019128 GO:0007064|GO:0031390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01028 K11271 - csv:101203202 793.882