Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01047 ATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAG 603 48.76 MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG* 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8400693 8403313 + CsaV3_3G010470.1 Csa03g01047 521952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01047 200 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 72 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Csa03g01047 200 Gene3D - 157 199 - -
Csa03g01047 200 Gene3D - 58 156 IPR036771 -
Csa03g01047 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Csa03g01047 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986
Csa03g01047 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Csa03g01047 200 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 200 - -
Csa03g01047 200 Coils Coil 165 185 - -
Csa03g01047 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Csa03g01047 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 200 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01047 K02134 - csv:101206104 389.037