Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g01102 | ATGTACCTACTACCAAATCTCAATTTTCAGTTTGACAATCCACAATTCTCCATTTGCTTAATTACCCCTTTCCCCTTTCTGTATATATTGTTTGTTTCTCTTCTTCTTCTTCCTCTTTCATCCTTGTTTTCTTCGCCCACTTTCCCCTTTCCTCTGCTTCTCAATCGGATCCAATCCGACCCATCAATCCAATTCCACGTAATGGGTAGCGGAGAAAAGGTCTTCACTTTGAAGGAAGTCGCTGAACACAACAATCACAAGGATTGTTGGCTCATCATCAGTGGCAAGGTGTATGATGTGACCAAGTTTTTAGAAGACCACCCTGGTGGTGATGATGTTTTGCTATCAGCTACAGGGAAAGACGCAACCGACGACTTTGAAGACGTGGGGCACAGTGACAATGCAAGAGAAATGATGGATCAATACTACGTTGGGGAGATTGATTCTTCAACAATTCCAAAGAAGGTCGCCTACACGCCTCCAAAACAGCCTCATTACAATCAGGACAAGACATCCGAATTCATCATCAAGCTTCTCCAGTTCCTTGTCCCGCTTGCGATTTTGGGATTGGCAGTCGCCATACGCTTCTACACCAAACAAGCTTGA | 606 | 44.06 | MYLLPNLNFQFDNPQFSICLITPFPFLYILFVSLLLLPLSSLFSSPTFPFPLLLNRIQSDPSIQFHVMGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDSSTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA* | 202 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8715763 | 8719524 | + | CsaV3_3G011020.1 | Csa03g01102 | 522007 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g01102 | 201 | SMART | Cyt_b5_2 | 75 | 148 | IPR001199 | - | |
Csa03g01102 | 201 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 72 | 157 | IPR036400 | - | |
Csa03g01102 | 201 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 76 | 147 | IPR001199 | - | |
Csa03g01102 | 201 | PANTHER | CYTOCHROME B5 | 68 | 199 | - | - | |
Csa03g01102 | 201 | Gene3D | - | 68 | 153 | IPR036400 | - | |
Csa03g01102 | 201 | PANTHER | CYTOCHROME B5 | 68 | 199 | - | - | |
Csa03g01102 | 201 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 72 | 148 | IPR001199 | - | |
Csa03g01102 | 201 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 103 | 110 | IPR018506 | GO:0020037 | |
Csa03g01102 | 201 | PRINTS | Cytochrome B5 signature | 97 | 107 | IPR001199 | - | |
Csa03g01102 | 201 | PRINTS | Cytochrome B5 signature | 107 | 121 | IPR001199 | - | |
Csa03g01102 | 201 | PRINTS | Cytochrome B5 signature | 122 | 129 | IPR001199 | - | |
Csa03g01102 | 201 | PRINTS | Cytochrome B5 signature | 135 | 147 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g00093 | Csa-Chr2:622857 | Csa03g01102 | Csa-Chr3:8715763 | 4.82E-18 | dispersed | |
Csa03g00777 | Csa-Chr3:6794685 | Csa03g01102 | Csa-Chr3:8715763 | 3.61E-46 | dispersed | |
Csa03g01102 | Csa-Chr3:8715763 | Csa05g00025 | Csa-Chr5:116589 | 3.66E-66 | dispersed | |
Csa02g00931 | Csa-Chr2:8786198 | Csa03g01102 | Csa-Chr3:8715763 | 4.52E-76 | transposed | |
Csa06g02086 | Csa-Chr6:18617774 | Csa03g01102 | Csa-Chr3:8715763 | 5.40E-35 | transposed | |
Csa07g01998 | Csa-Chr7:19542777 | Csa03g01102 | Csa-Chr3:8715763 | 2.93E-11 | transposed | |
Csa03g01102 | Csa-Chr3:8715763 | Csa03g02688 | Csa-Chr3:25692835 | 4.17E-66 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g01102 | K23490 | - | csv:101214209 | 371.318 |