Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa03g01150 | ATGGCTAGTCAAGTAAATCTAGCGGTTGGATCACTTGTTTGGGTTGAGGATCCTGAGGTAGCTTGGCTAGATGGGGATGTCCTGGAAGTTAATGGTGAAGACATCAAAGTACTTTGTACGTCAGGAACTACTGTTGAGGTCAAATCATCAAATGTCTATCCGAAGGATCCTGAATTTCCTCCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTGCATGAGCCGGGGCTTCTACAAAACTTAAAATCTCGTTATGATGTTAATGAAATTTATACCTATACTGGAAGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATCACATGATGCAACAATATAAAGGTGCAGCTTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCTTATAGACAGATGATTAATGAAAGTATCAGCCAGTCAATTTTAGTTAGTGGGGAAAGTGGTGCTGGTAAAACAGAGAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGCTGGAGGGAAGGCTGCAACTGGTGAACGTTCTGTAGAGCAGCAAGTACTAGAGTCGAACCCTGTTCTTGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGCCGTTTTGGTAAATTTGTGGAGATCCAATTTGATCAGAGCTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTCTATATGCTTTGTGCCGCACCGACAGAGGATATTGAGAAGTATAAATTAGGGAATCCAAGAACATTTCATTATCTTAATCAGTCTAATTGCTATGAACTTGATGGAGTGGATGATTCCAAGGAATATCTTTCAACTAGGAAAGCTATGGATGTTGTTGGAATAAGTACAACTGAGCAGGATGCGATATTTCGAGTTGTAGCTGCGGTACTTCATTTGGGCAACGTCGAATTTGCAAAGGGGACGGAGATAGATTCCTCTGAACCGAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGAGTGATAGTTACACGCGATGAAACCATAACTAAATGTCTTGATCCGGACTCTGCAACTCTTAGTAGGGATGCTTTAGCAAAGATCGTTTATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCCTGATTCGAAGAACTTAATTGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGCTTTGAGCAATTCTGTATTAACCTGACCAATGAGAAATTGCAGCAACATTTCAACCAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAATTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGTGGCGTCATTGCTCTTCTGGATGAGGCTTGCATGTTTCCGAGATCTACACATGATACTTTTGCGCAGAAACTATATCAAACTTTTAAGGACCATAAGCGTTTTAGTAAGCCTAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGTGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCACCAAGCACTGCTGAGTGCTTCCAAGTGCACCTTTGTTGCAGGACTCTTCCCCCCCTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTCGATTTAAGCAACAACTTCAATCTTTGCTTGAGACACTAAATGCTACTGAGCCACACTACATTCGCTGTGTAAAGCCAAACAATCTTCTTAAACCAGGCATCTTTGAGAACAATAATGTTTTGCAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCTACTAGGAAAACGTTTGATGAATTTATTGGTCGGTTTACTATCTTGGCACCTGGTGTTTTGAAGGGAAGCTCTAATGAAGCCACTGGGTGTAAGAGGCTTTTGGAGAAAGTGAACATTAAAGGGTATCAGATTGGTAAAACCAAAGTATTTCTTAGGGCTGGTCAAATGGCAGAATTAGATGCTTGCCGAACTGAGGTCTTGGGAAGATCTGCTATGGTTGTCCAAAGGAAAGTACGCTCATATTTGGGACGCAAAAACTTTATATTGTTGCGGTTGGCTGCTATACAAATTCAAGCCCTGTGTAGAGGGCAAATTGCACGCCAGCATTATGAAGACATTAGAATGGAAGCTGCTTCCATCAAAATCCAAAAGTATTGGCGTATGCATTTTGCCCGATGTTGCTATAAAAGAATTTGCACTTCAGCTGTAGCTATTCAAGCAGGTATCCACGGTATGGTTGCTCGCAAAGAGCTTAAGTTCAGGAGACAAACAAGAGCTGCAATTATCATTCAGAGTCGATGTCGGCAATACTTGGCCTGTATGCATTATGTGAGGATTAGAAAAGCTGCAATTACTACTCAATGTGCTTGGAGAGGAAGAGTTGCACGAAAAGAACTTCGAAAGCTTAAAATGGCTGCTAAGGAAACTGGCGCTCTCCAAGCTGCCAAAAATCTGCTGGAGAAGCAAGTGGAAGAACTAACATGGAGATTGCAGCTAGAGAAACGAATGAGGGCTGACATGGAGGAAGCCAAGACTCGAGAAAACACAAAATTGAAGGCTGATTTAGAAGAAATGCGAACTCAATTTCAGGAAACAAAAGCACTGCTTAATGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGCAAGTTCCTGTCATACAAGAGGTTCCCGTTGTTGATAATGAGCTGATCACTAAGTTAACTACTGAAAATGAACAACTGAAGGCTCATGTAAGTTCGTTGGAAAATAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACCGTCTTAGTGAAGAGCGGCTTAAGCAGGCTACAGAGGCAGAGTCAAAGATAATTGAATTAAAAACTGCCATGCAAAGGCTTGAGGAAAAAGTATCCGACTTGGAAACTGAGGACCAAATTCTTAGGCAGCAAACACTGCTAAAGCCTCCTTCAAGAAAAATGTCTGGACGTATAGCAATTCAGCCTTTGGAAAATGGCCACCACGACTTACTAAGCAATGCACCCTCAAAAAAGTATGGTACCGATGCTGATGCAAAATTGAGGAGATCCCAGATTGAAAGGCAGAACGAAGGAATGGACGCTCTATCAAAATACCTGACACAGGATCTTGGGTACAGTGAGGGAAAACCTATTGCTGCTTTTGTAATTTATAAATCTTTCCTTCATTGGAGATCATTTGAAGCTGAAAAAACAAGTGTTTTTGATCGGCTAATTCAGCTGATTGGTTCTGCAATTGAGAATCAGGATGATGATGAACTTATGACCTATTGGTTATCCAACACAACCACATTGTTGTTCCTTCTTCAAAAGAGTTTAAAAGCCACACCACGGAAGCCTCCCACCCCTACATCATTTTTTGAGCGGATGACCCAAGGGTTTCGGTCATCTTCTGCCCTTCCAGTTGGCACCCTTGATGTGGTGCGGCAAGTTGAGGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTAACAGCGTATGTAGAAAAGATATTTGGAATAGTTAGAGACAATCTAAAGAAGGAACTATCGCCGTTGATTTCAGCTTGTATCCAGGCTCCAAGATCTTCAAGAGGAAATATTTTAAAATCATCTGGCCAGGAAAATAGCAGTAGCCCTCCCAGTAGTAGTAATTCATGGAGCAGCATCATCGGGAGCCTCAACGATCATCTGTGTAGATTGCAACAGAACTTCGTGCCTAACGTTTTGGTTCAGAAGATGTTCACTCAGGTTTTTTCATGTATCAACGTTCAACTTTTCAACAGTCTTTTACTTCGTCGAGAGTGCTGTACGTTTAGCAATGGGGAATATGTGAAGTCAGGATTGGCTGAGTTAGAGATTTGGTGTTCTCAAGCAAAAGAAGAGTATGCTGGGTCATCTTGGGATGAGCTAAAACCGGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTGAGCGTTCAACAGCTTTATAGAATATGTACTCTTTATTGGGACGACAATTACAATACTAGGAGTGTAGCTCCAGATGTTATTTCTAGCATGAAAGTTATGATGACTGAGGATTCCAACGATGAAGATAGTAGTTCCTTTTTGTTAGATGACAATTCCAGTATACCTTTCGCGGTTGATGACATATTCACTTCCCTGCAAGAAAAGAATTTTCAGGATGTAAAGCCTCCAGCAGAACTACTAGAGAATCCGGCCTTCCAATTTTTACAGGAATAA | 4500 | 40.87 | MASQVNLAVGSLVWVEDPEVAWLDGDVLEVNGEDIKVLCTSGTTVEVKSSNVYPKDPEFPPCGVDDMTKLAYLHEPGLLQNLKSRYDVNEIYTYTGSILIAVNPFRRLPHLYDNHMMQQYKGAALGELSPHPFAIANSAYRQMINESISQSILVSGESGAGKTESTKMLMRYLAHVGGRAGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPTEDIEKYKLGNPRTFHYLNQSNCYELDGVDDSKEYLSTRKAMDVVGISTTEQDAIFRVVAAVLHLGNVEFAKGTEIDSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDPDSATLSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGVIALLDEACMFPRSTHDTFAQKLYQTFKDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLSASKCTFVAGLFPPLPEETSKSSKFSSIGTRFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPGVLKGSSNEATGCKRLLEKVNIKGYQIGKTKVFLRAGQMAELDACRTEVLGRSAMVVQRKVRSYLGRKNFILLRLAAIQIQALCRGQIARQHYEDIRMEAASIKIQKYWRMHFARCCYKRICTSAVAIQAGIHGMVARKELKFRRQTRAAIIIQSRCRQYLACMHYVRIRKAAITTQCAWRGRVARKELRKLKMAAKETGALQAAKNLLEKQVEELTWRLQLEKRMRADMEEAKTRENTKLKADLEEMRTQFQETKALLNEEREAAKKVVEQVPVIQEVPVVDNELITKLTTENEQLKAHVSSLENKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKVSDLETEDQILRQQTLLKPPSRKMSGRIAIQPLENGHHDLLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTQDLGYSEGKPIAAFVIYKSFLHWRSFEAEKTSVFDRLIQLIGSAIENQDDDELMTYWLSNTTTLLFLLQKSLKATPRKPPTPTSFFERMTQGFRSSSALPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIFGIVRDNLKKELSPLISACIQAPRSSRGNILKSSGQENSSSPPSSSNSWSSIIGSLNDHLCRLQQNFVPNVLVQKMFTQVFSCINVQLFNSLLLRRECCTFSNGEYVKSGLAELEIWCSQAKEEYAGSSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVAPDVISSMKVMMTEDSNDEDSSSFLLDDNSSIPFAVDDIFTSLQEKNFQDVKPPAELLENPAFQFLQE* | 1500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 9010824 | 9028523 | - | CsaV3_3G011500.1 | Csa03g01150 | 522055 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa03g01150 | 1499 | ProSiteProfiles | IQ motif profile. | 858 | 887 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | PANTHER | MYOSIN | 6 | 1497 | - | - | |
| Csa03g01150 | 1499 | MobiDBLite | consensus disorder prediction | 1272 | 1292 | - | - | |
| Csa03g01150 | 1499 | Gene3D | - | 256 | 314 | - | - | |
| Csa03g01150 | 1499 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 316 | 605 | - | - | |
| Csa03g01150 | 1499 | CDD | MyosinXI_CBD | 1101 | 1468 | IPR037975 | GO:0007015 | |
| Csa03g01150 | 1499 | ProSiteProfiles | IQ motif profile. | 835 | 864 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | ProSiteProfiles | IQ motif profile. | 787 | 816 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | CDD | MYSc_Myo11 | 76 | 724 | IPR036018 | - | |
| Csa03g01150 | 1499 | Gene3D | - | 443 | 627 | - | - | |
| Csa03g01150 | 1499 | Gene3D | Kinesin motor domain | 65 | 666 | IPR036961 | - | |
| Csa03g01150 | 1499 | Pfam | Myosin N-terminal SH3-like domain | 9 | 52 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | PANTHER | MYOSIN-7 | 6 | 1497 | - | - | |
| Csa03g01150 | 1499 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 33 | 790 | IPR027417 | - | |
| Csa03g01150 | 1499 | Gene3D | - | 670 | 737 | - | - | |
| Csa03g01150 | 1499 | Coils | Coil | 920 | 954 | - | - | |
| Csa03g01150 | 1499 | ProSiteProfiles | Dilute domain profile. | 1150 | 1445 | IPR002710 | - | |
| Csa03g01150 | 1499 | ProSiteProfiles | IQ motif profile. | 812 | 839 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | Coils | Coil | 976 | 1010 | - | - | |
| Csa03g01150 | 1499 | Coils | Coil | 895 | 915 | - | - | |
| Csa03g01150 | 1499 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 789 | 887 | IPR027417 | - | |
| Csa03g01150 | 1499 | ProSiteProfiles | Myosin motor domain profile. | 62 | 736 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | Pfam | Myosin head (motor domain) | 64 | 724 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | ProSiteProfiles | IQ motif profile. | 762 | 791 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | Pfam | IQ calmodulin-binding motif | 836 | 851 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | Pfam | IQ calmodulin-binding motif | 859 | 879 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | Pfam | IQ calmodulin-binding motif | 789 | 808 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | Pfam | IQ calmodulin-binding motif | 765 | 782 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | SMART | iq_5 | 761 | 783 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | SMART | iq_5 | 786 | 808 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | SMART | iq_5 | 857 | 879 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | SMART | iq_5 | 809 | 831 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | SMART | iq_5 | 738 | 760 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | SMART | iq_5 | 834 | 856 | IPR000048 | GO:0005515 | |
| Csa03g01150 | 1499 | Coils | Coil | 1018 | 1052 | - | - | |
| Csa03g01150 | 1499 | Pfam | DIL domain | 1321 | 1424 | IPR002710 | - | |
| Csa03g01150 | 1499 | Gene3D | - | 739 | 787 | - | - | |
| Csa03g01150 | 1499 | Gene3D | - | 788 | 836 | - | - | |
| Csa03g01150 | 1499 | Gene3D | - | 837 | 886 | - | - | |
| Csa03g01150 | 1499 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | SMART | MYSc_2a | 56 | 737 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | PRINTS | Myosin heavy chain signature | 200 | 227 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | PRINTS | Myosin heavy chain signature | 433 | 461 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | PRINTS | Myosin heavy chain signature | 486 | 514 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Csa03g01150 | 1499 | SMART | DIL_2 | 1320 | 1427 | IPR002710 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Csa01g01087 | Csa-Chr1:6746292 | Csa03g01150 | Csa-Chr3:9010824 | 1.86E-07 | dispersed | |
| Csa03g01150 | Csa-Chr3:9010824 | Csa07g02070 | Csa-Chr7:19990490 | 0 | dispersed | |
| Csa03g04130 | Csa-Chr3:36200613 | Csa03g01150 | Csa-Chr3:9010824 | 1.20E-171 | transposed | |
| Csa05g02081 | Csa-Chr5:24121425 | Csa03g01150 | Csa-Chr3:9010824 | 0 | transposed | |
| Csa03g01150 | Csa-Chr3:9010824 | Csa06g00724 | Csa-Chr6:5908642 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa03g01150 | K10357 | - | csv:101221506 | 2924.04 |