Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01527 ATGGCGTCGTCTCTGATTCTGAATCCTGTGACGAGTTCTGAACGATCGCGTGATTCTTCAAGAAAGAAGAAGAAGAAGAAAGCGACAAGAGAAGATGATCGTCAAGATCAGGATCAAATCAAATGGAAATCACAAGCTCAACATCAAGTTTACTCTTCGAAGCTGTTGCGCGCTTTGAGTCAGGTCAGGATCAGTTCTCCTGAGCCAACACCAAACGAAACGCCTCGGCGTGGCCGAGCGGTGCGGGAGGCATCCGATACTGTTTTAGCCATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGAAAACACAATAAACAGAAAGCGCGTGTGATCGGAAACAGCCGTACGAAGAAGCCGAGTGTTAGCGTGTTACGGTTGAGAGGAAAAGGACTACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGACTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTAGATGAAGTAACCGATTATATTCCAGCTCTAGAGATGCAGATCCGAGTCATGAGCGCCATAGTCAACTTGGTTTCAAGCTCCTCTTCATCTTCTACTGGTATCGATTCTTCTATCCCTCCATCTTCTACCTGA 639 48.36 MASSLILNPVTSSERSRDSSRKKKKKKATREDDRQDQDQIKWKSQAQHQVYSSKLLRALSQVRISSPEPTPNETPRRGRAVREASDTVLAMTAKGRSRWSRAILTNRLKLKFRKHNKQKARVIGNSRTKKPSVSVLRLRGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMSAIVNLVSSSSSSSTGIDSSIPPSST* 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11336382 11337020 + CsaV3_3G015270.1 Csa03g01527 522432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01527 212 MobiDBLite consensus disorder prediction 61 85 - -
Csa03g01527 212 MobiDBLite consensus disorder prediction 25 41 - -
Csa03g01527 212 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 209 - -
Csa03g01527 212 MobiDBLite consensus disorder prediction 1 47 - -
Csa03g01527 212 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 209 IPR044660 GO:0006355
Csa03g01527 212 CDD bHLH_AtIBH1_like 135 190 IPR044549 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01527 Csa-Chr3:11336382 Csa06g01863 Csa-Chr6:16812784 6.31E-75 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01527 - - csv:105434845 349.747