Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01549 ATGATCAACAGACCACTTGTGCTCACTTACCTGTATCTTTTCATCTACATTTTGCTGTCATCTGGAGTTATTTTGTATAACAAGTGGGTGCTCTCCCCAAAATACTTCAATTTTCCTTTGCCTATTACACTTACAATGATTCATATGGGGTTTTCTGGTGCTGTTGCATTCTTCCTTGTTCGAGTTTTCAAGGTTGTATCTCCAGTCAAAATGACTTTTGAAATATATGCAACGTGTGTCATCCCAATTAGTGCATTTTTTGCGTCAAGTCTTTGGTTTGGTAACACTGCCTACTTGCATATATCTGTGGCCTTCATTCAGATGCTTAAGGCTTTAATGCCAGTAGCCACATTTTTAATGGCTGTTGTGTGTGGTACCGACAAGTTAAGGTGTGACGTTTTCTTCAACATGGTGCTGGTCAGTGTTGGGGTTGTCGTTTCCTCATATGGAGAGATACATTTTAATGTAGTAGGTACAGTTTACCAGGTCACAGGTATCTTTGCAGAAGCTCTCAGGCTGGTCTTGACGCAGGTCCTTCTGCAAAAGAAGGGCTTGACTCTAAATCCTATCACCAGCTTATATTACATTGCTCCATGCAGTTTTGTTTTCCTGTTTGTTCCTTGGTACCTGTTGGAGAAGCCAGAGATGCAAGTTACTCAAATTCAGTTCAACTTTTGGATCTTTTTTTCAAATGCATTGTGTGCCTTGGCGTTGAACTTCTCTATTTTCTTAGTAATTGGAAGAACTGGAGCAGTTACTATTCGAGTTGCTGGTGTTCTCAAGGACTGGATTCTAATAGCCCTCTCAACAGTCATATTTCCTGAATCTACTATAACAGGGCTGAATATCATTGGCTATGCAATCGCATTGTGTGGGGTCCTCATGTATAATTACATAAAGGTCAAGGATGTTCGGGCATCTCAATTATCTTCTGACAGCCTTCCAGACAGAATCGTAAAGGACTGGAAGTTAGAGAAGAAGTCGTCGGATATATTCACACCAAATAGCAACGATGGCAATGGCGGAAACGGTTTATCCGATACGAATGTGGATGATGAGGCACCTTTACTTGCATCATCAAGGTTGTCGCACATCGGTCGGATGCAGGTTGGTAACCACAATCAGTAG 1128 41.4 MINRPLVLTYLYLFIYILLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGAVAFFLVRVFKVVSPVKMTFEIYATCVIPISAFFASSLWFGNTAYLHISVAFIQMLKALMPVATFLMAVVCGTDKLRCDVFFNMVLVSVGVVVSSYGEIHFNVVGTVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPEMQVTQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPESTITGLNIIGYAIALCGVLMYNYIKVKDVRASQLSSDSLPDRIVKDWKLEKKSSDIFTPNSNDGNGGNGLSDTNVDDEAPLLASSRLSHIGRMQVGNHNQ* 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11555308 11561287 + CsaV3_3G015490.1 Csa03g01549 522454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01549 375 MobiDBLite consensus disorder prediction 330 347 - -
Csa03g01549 375 PANTHER SOLUTE CARRIER FAMILY 35 1 346 - -
Csa03g01549 375 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 346 - -
Csa03g01549 375 Pfam Triose-phosphate Transporter family 11 297 IPR004853 -
Csa03g01549 375 MobiDBLite consensus disorder prediction 330 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa03g01549 Csa06g01776 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01549 Csa-Chr3:11555308 Csa04g00774 Csa-Chr4:5351361 1.63E-105 dispersed
Csa03g01549 Csa-Chr3:11555308 Csa04g01572 Csa-Chr4:15175041 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01549 - - csv:101213611 706.442