Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g01584 | ATGGAGGACGATTTCGAGTTCCCATCTGCAAGCAACGTGGATGAGGAAATGGGGTTGCCCGAGGACGAAGCCGAGAGCCCAGTTCTGAATGTTGGCCAAGAGAAGGAGATTGGGAAGAATGGGCTGAAGAAGAAACTTGTTAAAGAAGGTGAAGGATGGGAAACTCCCGACACTGGTGATGAGGTCGAAGTGCATTATACGGGAACCCTTCTTGATGGCACTCAGTTTGATTCGAGCCGTGACCGAGGAACGCCTTTCAAGTTCAAGCTCGGGGAAGGCCAAGTGATTAAAGGGTGGGATGAAGGTATCAGAACAATGAAAAAGGGTGAAAATGCAGTTTTCACGATACCCCCGGAATTGGCCTATGGAGAGTCCGGCTCTCCTCCAACAATACCACCGAACGCTACTCTTCAATTTGACGTTGAGCTACTTTCGTGGCACAGTGTCAAAGACATCTGTCAAGATGGAGGAATCTTGAAAAAGATCCTTGTTAAAGGAGATGGTTGGGAAAAACCGAAGGATCTAGACGAAGTTCTGGTTCGTTATGAGGCTCGTCTTGAAAACGGTACACTGATCTCAAAGTCTGATGGGGTCGAATTCACTGTTGAAAAGGGGTACTTCTGTCCTGCCTTGGCAACTGCTGTGAAGACGATGAAAAAAGGGGAGAAAGCTTTGTTGACTGTTAGACCACAATATGGATTTGGGGAGTCTGGTAGGCCTGTATCTGGAGAAGAAGGTGCTGTGCCTCCAAATGGTACACTTCAAATTACCCTTCAATTGGATTCATTGAAAACTGTTACAGAGATCACAAAGGATAAGAAGGTCTTGAAGAAGACCCAGAAGGAGGGAGAAGGATATGAACAACCAAATGAGGGAGCAGTGGTGCAAGTGAAACTTACCGGCAAACTGGGTGATGGGACGATTTTTACTAAGAAGGGTGATGATGAAAGAACGTTTGAGTTCAAAATTGACGAAGAACAAGTCATTGAAGGACTCGATTTGGCTGTGAGAAAGATGAAGAAGGGAGAAATTGCCTTGGTGACGATCCATCCACAATATGCTTTTGGATCTTCTGATTCATCACAAGATCTAGCTGTGGTTCCTGCAAACTCAACTGTATATTACGAAGTTGAGCTGGTTTCATTCGTCAAAGAAAAAGAATCTTGGGACCTGAACAAAGCAGAAGAGAAAATAGAAGCAGCAGGTAAAAAGAAGGAAGAAGGAAACGTTCTATTCAAAGCTGGAAAATATGAGAGAGCATCAAGAAGATATGAAAAGGCTGTCCGCTACATTGAATATGATACTTCTTTCAGTGACGAGGAGAAGCAACAGAGCAAGGCACTAAAGATTTCATGCAATCTCAACAATGCTGCTTGCAAACTGAAAGTCAAAGACTACAAACAAGCAGAGAAGCTTTGTACAAAGGTGTTGGAACTTGACAGTAGGAACGTGAAAGCTCTATATAGAAGGGCTCAAGCATATATTCAACTTGTTGATCTTGATCTTGCTGAGCGGGATATCAAGAAAGCCCTCGAGATTGACCCAGATAACAGGGATGTGAAGATTGAATACAGGCAATTGGAAGACAAGGTGAGGGAATACAATAAGAGAGATGCACAGTTTTACGGCAACATTTTTGCAAAAATGAACAAGTTGGAGCATGCTAAGTCGGCTAATTCAGGTGGAAAGCAAGAGGCAGTACCAATGACTATTGATAGCAAAGCTTAA | 1728 | 43.69 | MEDDFEFPSASNVDEEMGLPEDEAESPVLNVGQEKEIGKNGLKKKLVKEGEGWETPDTGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFKLGEGQVIKGWDEGIRTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWHSVKDICQDGGILKKILVKGDGWEKPKDLDEVLVRYEARLENGTLISKSDGVEFTVEKGYFCPALATAVKTMKKGEKALLTVRPQYGFGESGRPVSGEEGAVPPNGTLQITLQLDSLKTVTEITKDKKVLKKTQKEGEGYEQPNEGAVVQVKLTGKLGDGTIFTKKGDDERTFEFKIDEEQVIEGLDLAVRKMKKGEIALVTIHPQYAFGSSDSSQDLAVVPANSTVYYEVELVSFVKEKESWDLNKAEEKIEAAGKKKEEGNVLFKAGKYERASRRYEKAVRYIEYDTSFSDEEKQQSKALKISCNLNNAACKLKVKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIQLVDLDLAERDIKKALEIDPDNRDVKIEYRQLEDKVREYNKRDAQFYGNIFAKMNKLEHAKSANSGGKQEAVPMTIDSKA* | 576 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 11754826 | 11758877 | + | CsaV3_3G015840.1 | Csa03g01584 | 522489 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g01584 | 575 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Csa03g01584 | 575 | SUPERFAMILY | FKBP-like | 37 | 152 | - | - | |
Csa03g01584 | 575 | Gene3D | Tetratricopeptide repeat domain | 386 | 544 | IPR011990 | GO:0005515 | |
Csa03g01584 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 276 | 383 | - | - | |
Csa03g01584 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 383 | 561 | - | - | |
Csa03g01584 | 575 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 19 | 271 | - | - | |
Csa03g01584 | 575 | Gene3D | - | 151 | 262 | IPR046357 | GO:0003755 | |
Csa03g01584 | 575 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 276 | 383 | - | - | |
Csa03g01584 | 575 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 383 | 561 | - | - | |
Csa03g01584 | 575 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 19 | 271 | - | - | |
Csa03g01584 | 575 | SUPERFAMILY | FKBP-like | 268 | 398 | - | - | |
Csa03g01584 | 575 | Coils | Coil | 517 | 537 | - | - | |
Csa03g01584 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 292 | 383 | IPR001179 | GO:0003755 | |
Csa03g01584 | 575 | SUPERFAMILY | TPR-like | 397 | 549 | IPR011990 | GO:0005515 | |
Csa03g01584 | 575 | ProSiteProfiles | TPR repeat profile. | 484 | 517 | IPR019734 | GO:0005515 | |
Csa03g01584 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 147 | IPR001179 | GO:0003755 | |
Csa03g01584 | 575 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 175 | 264 | IPR001179 | GO:0003755 | |
Csa03g01584 | 575 | SUPERFAMILY | FKBP-like | 150 | 268 | - | - | |
Csa03g01584 | 575 | SMART | tpr_5 | 484 | 517 | IPR019734 | GO:0005515 | |
Csa03g01584 | 575 | SMART | tpr_5 | 450 | 483 | IPR019734 | GO:0005515 | |
Csa03g01584 | 575 | SMART | tpr_5 | 401 | 434 | IPR019734 | GO:0005515 | |
Csa03g01584 | 575 | Gene3D | - | 32 | 150 | IPR046357 | GO:0003755 | |
Csa03g01584 | 575 | Gene3D | - | 265 | 385 | IPR046357 | GO:0003755 | |
Csa03g01584 | 575 | Coils | Coil | 384 | 404 | - | - | |
Csa03g01584 | 575 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Csa03g01584 | 575 | Pfam | Tetratricopeptide repeat | 484 | 517 | IPR001440 | GO:0005515 | |
Csa03g01584 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 54 | 144 | IPR001179 | GO:0003755 | |
Csa03g01584 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 170 | 259 | IPR001179 | GO:0003755 | |
Csa03g01584 | 575 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 286 | 380 | IPR001179 | GO:0003755 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g01584 | Csa-Chr3:11754826 | Csa07g01568 | Csa-Chr7:16107814 | 0 | dispersed | |
Csa04g01316 | Csa-Chr4:13511642 | Csa03g01584 | Csa-Chr3:11754826 | 8.55E-15 | dispersed | |
Csa03g01584 | Csa-Chr3:11754826 | Csa03g01633 | Csa-Chr3:12205497 | 3.96E-06 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g01584 | K09571 | - | csv:101210041 | 1108.2 |