Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g01585 | ATGGAGAAGGACAAACCCCAAAGCTTTTCTGGTGGATTTCCGCCACCATCAAGTCGTTACTCAGGTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCAATGCCTTCCGGTGGTCTTTCAGATTCAGGTCAATTTGGTCATGGAATGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTAGAATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCCCATTCAGAAATACTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTCGGTGTGATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATCTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCCTCGACTGCCACCTCCACGATACAAGTTGGCGAGTCATCTTCAGCTGTTGGAGAAGCAAGATCAACTCCTACTTCAACAATTGGAGCAGCTACCTCTAAAGATGACGCTGCCGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCTATGGATGGCTTGACAACCATAAAGCCTGAGATGCTCGTCTCTGGGTCTGATGAAGCCTCTGCAGCTGATTGCAAGAAAGCCATGTCAGCTACAAAACTCGCTGAGCTTGCGTTAATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATCGACAGTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATCGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGATACAAACGGTCTTTCTGCTGAGAACAATGAACTAAAGCTGCGGTTACAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTAAATGAAGCACTCAAAGAGGAAATTCAGCATTTGAAAGTACTGACTGGCCAAGCAATCCCAAATGGTGGATCAGTTACAAACTTTGCTTCCTTTGGAGCTGCCCAACCCTTTTACCCAAGCAATCAAGCAATGCACACTTTGTTAACTGCACAGCAGTTTCAACAACTTCAAATCCACTCACAGCAGCAACAACAACATTTCCAATACCATCAGCTTCATCAGCTTCATCAACAGTCAACTGGAGACAACAAATCCAAAGGATCGGCATCTTCTCCAAATCCAAAAGACAACAACACATCAGATACGTCCTCTACCACTTGTTGA | 1251 | 45.0 | MEKDKPQSFSGGFPPPSSRYSGLSPTGSIFNGKSEATSSSMLLPPMPSGGLSDSGQFGHGMPTDSNRFSHDISRMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSTIQVGESSSAVGEARSTPTSTIGAATSKDDAAVGLKERPRVRHQHSQSMDGLTTIKPEMLVSGSDEASAADCKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQVHLQDALNEALKEEIQHLKVLTGQAIPNGGSVTNFASFGAAQPFYPSNQAMHTLLTAQQFQQLQIHSQQQQQHFQYHQLHQLHQQSTGDNKSKGSASSPNPKDNNTSDTSSTTC* | 417 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 11760363 | 11766191 | + | CsaV3_3G015850.1 | Csa03g01585 | 522490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g01585 | 416 | MobiDBLite | consensus disorder prediction | 11 | 45 | - | - | |
Csa03g01585 | 416 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 229 | 292 | IPR004827 | GO:0003700|GO:0006355 | |
Csa03g01585 | 416 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
Csa03g01585 | 416 | Gene3D | - | 230 | 283 | - | - | |
Csa03g01585 | 416 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 8 | 410 | - | - | |
Csa03g01585 | 416 | Coils | Coil | 247 | 316 | - | - | |
Csa03g01585 | 416 | SUPERFAMILY | Leucine zipper domain | 231 | 282 | IPR046347 | GO:0003700|GO:0006355 | |
Csa03g01585 | 416 | SMART | brlzneu | 227 | 291 | IPR004827 | GO:0003700|GO:0006355 | |
Csa03g01585 | 416 | Pfam | bZIP transcription factor | 231 | 285 | IPR004827 | GO:0003700|GO:0006355 | |
Csa03g01585 | 416 | MobiDBLite | consensus disorder prediction | 383 | 416 | - | - | |
Csa03g01585 | 416 | CDD | bZIP_plant_RF2 | 232 | 281 | IPR044759 | GO:0003700|GO:0006355 | |
Csa03g01585 | 416 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 8 | 410 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g01585 | Csa-Chr3:11760363 | Csa03g01596 | Csa-Chr3:11855707 | 0 | dispersed | |
Csa03g01585 | Csa-Chr3:11760363 | Csa06g00532 | Csa-Chr6:4513114 | 1.66E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
31215 | PF00170 | bZIP_1 | 1.90E-08 | CL0018 | Csa | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g01585 | - | - | csv:101210291 | 743.036 |