Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01651 ATGAAACAACCACTCTTCTTTATTACACTCACCTCCATTCTCACAACTCCCCCATTCCCTCTTCATTTTTCACAAACACACTCCTTTCCTCTGTTCCCAAAAATGGCTGATTCTCCTCTCAAATGCCTGTGTTTCCTTCTGTTTTTAGACTCTTTCCTTCTTTCAAGTGCTCTGTTTCTCAAAACTTATGTTGTTCAAATGGATAGGTCTGCAATGCCGGACTCTTTTACCAATCATTTTGAGTGGTACTCCAATGTGCTAACCAATGTGGTTCTTGACCTTCAAAGAGAAGGTAATGGTGGAGGAGGTGAAGAGAGGATCATTTACGGTTATCACAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGTTGAGAAGCTCGAGGAAGAAGATGGGGTTGTGGCTATTTTTCCTGAGATGAAGTACGAGCTTCATACTACTAGAAGCCCCAGATTTCTTGGGCTTGAACCAGCTGATAGCAACAGCGCCTGGTCTCAGCAAATTGCAGACCATGATGTGGTTGTTGGAGTCTTGGACACTGGGATTTGGCCGGAGAGTGACAGCTTTGACGATGCTGGAATGTCGCCAGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGGAGAGGGTTTACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTTTACCGTGGGTATCAAGCTGCAACTGGGAAATTTAACGAACAGTTGGAGTACAAATCGCCGAGGGATCAAGATGGGCATGGAACTCACACGGCAGCTACCGTCGCTGGCTCTCCGGTGGCCGGCGCAAGTCTTCTTGGTTATGCTTATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGAATTGCAGCTTACAAGGTCTGTTGGATTGGTGGCTGCTTTAGCTCCGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGATGGAGTAAATGTTCTGTCCATCTCTTTGGGAGGTGGGGTTTCTTCGTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGGGCAATGGAGATGGGCGTGTTTGTTTCTTGCTCGGCTGGAAATGGAGGGCCGGACCCTGTCAGTCTCACGAATGTATCACCATGGATAACTACCGTCGGTGCCAGTACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGCGATGGCAGAACAATAACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAACAATTCCCAATTGTCTACATGGGGAGTAACTCGAGCAGCCCTGATCCGAGCTCGCTCTGTTTAGAGGGAACTTTAGATCCCCATTTCGTCGCCGGAAAAATTGTGATATGTGATCGGGGAATTAGCCCTCGGGTCCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGATTGGGATGATTCTGTCGAACACGGCGGCAAATGGGGAAGAACTTGTTGCCGATTGCCATTTAGTACCGGCTGTCGCCATTGGGGAAAGAGAAGGCAAAGCAATTAAACAGTACGCATTAACGAATCGAAGAGCGACGGCGACATTAGGGTTTTTAGGGACAAGATTAGGGGTAAAACCGTCGCCGGTGGTGGCGGCGTTTTCATCTAGAGGACCAAATTTCCTCACTCTTGAGATCCTAAAGCCGGATCTGGTGGCTCCTGGCGTTAATATCCTCGCCGCTTGGACCGGAAAAACAGGACCGTCGAGCTTAACGACGGACACAAGAAGGGTCAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGCGGCGTAGCGGCTCTAATCAAATCGAAGCATCCCGATTGGAGCCCGTCGGCGATTAAATCCGCACTGATGACCACCGCTTACGTTCACGATAACACATACAAACCTCTGAAAGACTCCTCCGCCGCATCACCGTCAAGTCCATACGACCATGGCGCCGGCCACATAAATCCTAGAAAAGCCCTAGATCCTGGTTTGGTTTACGAAATTCAGCCGCAAGATTACTTCGACTTCCTCTGTACGCAGGATTTAAGCCCAACACAGCTGAAAGTCTTCTCAAAATATTCAAACAGAACATGCCGTGGTCTTCTCCCCAACCCAGGAGACTTGAATTACCCAGCAATCTCCGCCGTTTTCCCTGAGAAAACCACCGTCACTTCGCTGACCCTTCACAGAACCGTCACGAATGTGGGCCCTGCAACCTCCAGTTACCATGCGGTGGTGAGTCCGTTCAAGGGGGCCACCGTGAAAGTTGAGCCGGAGAGTCTGAATTTCACAAGAAGGTATGAAAAGGTTTCTTATAGAATAACTTTTGTGACGAAGAAGAGACAGAGCATGCCAGAATTTGGAGGGTTGATTTGGAAGGATGGAAGTCATAAAGTGAGAAGCCCCATTGTGATTACTTGGTTGTCGTTTGTTTGA 2424 48.64 MKQPLFFITLTSILTTPPFPLHFSQTHSFPLFPKMADSPLKCLCFLLFLDSFLLSSALFLKTYVVQMDRSAMPDSFTNHFEWYSNVLTNVVLDLQREGNGGGGEERIIYGYHNVFHGVAARLSEEEVEKLEEEDGVVAIFPEMKYELHTTRSPRFLGLEPADSNSAWSQQIADHDVVVGVLDTGIWPESDSFDDAGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYRGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVAGASLLGYAYGTARGMAPGARIAAYKVCWIGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGDGRTITGVSLYRGRITIPENKQFPIVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGIGMILSNTAANGEELVADCHLVPAVAIGEREGKAIKQYALTNRRATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKDSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLSPTQLKVFSKYSNRTCRGLLPNPGDLNYPAISAVFPEKTTVTSLTLHRTVTNVGPATSSYHAVVSPFKGATVKVEPESLNFTRRYEKVSYRITFVTKKRQSMPEFGGLIWKDGSHKVRSPIVITWLSFV* 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12329555 12332562 + CsaV3_3G016510.1 Csa03g01651 522556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01651 807 Pfam Peptidase inhibitor I9 62 148 IPR010259 -
Csa03g01651 807 CDD Peptidases_S8_3 145 622 IPR034197 -
Csa03g01651 807 Pfam Fibronectin type-III domain 703 801 IPR041469 -
Csa03g01651 807 Gene3D - 673 804 - -
Csa03g01651 807 Gene3D - 381 525 - -
Csa03g01651 807 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
Csa03g01651 807 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Csa03g01651 807 PRINTS Subtilisin serine protease family (S8) signature 585 601 IPR015500 -
Csa03g01651 807 ProSiteProfiles Serine proteases, subtilase domain profile. 144 656 - -
Csa03g01651 807 SUPERFAMILY Subtilisin-like 147 660 IPR036852 GO:0004252|GO:0006508
Csa03g01651 807 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 52 801 IPR045051 -
Csa03g01651 807 Pfam Subtilase family 174 627 IPR000209 GO:0006508|GO:0008236
Csa03g01651 807 ProSitePatterns Serine proteases, subtilase family, serine active site. 586 596 IPR023828 -
Csa03g01651 807 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 55 148 IPR037045 -
Csa03g01651 807 CDD PA_subtilisin_like 388 517 - -
Csa03g01651 807 Gene3D Peptidase S8/S53 domain 175 669 IPR036852 GO:0004252|GO:0006508
Csa03g01651 807 PANTHER XYLEM SERINE PROTEINASE 1 52 801 - -
Csa03g01651 807 Pfam PA domain 430 503 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01905 Csa-Chr2:18004320 Csa03g01651 Csa-Chr3:12329555 0 dispersed
Csa03g01651 Csa-Chr3:12329555 Csa07g02314 Csa-Chr7:21479271 0 dispersed
Csa03g01651 Csa-Chr3:12329555 Csa06g02998 Csa-Chr6:25857587 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01651 - - csv:101214825 1559.27