Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01667 ATGGCAAAAAGTGCATCACTTTTGTTCCTAATTATGATGGTTTGTCTGTCGGAAGCAGTTCTTGATAGCCATTATTACTCAAAAACATGTCCCAATGCAGAAAATATCATTCTTCAAACCGTCTACAATGCTTCCATCCATGACCCCAAAGTCCCTGCTCGTCTTCTTAGACTCTTCTTTCATGACTGTTTCATAAGGGGATGTGATGGTTCGGTGTTGATAGACTCGACACCAGAGAACCAGGCGGAGAAAGATGCACCTCCAAACATCTCGCTAAGGTCATTCTATGTGATAGATGAGGCCAAAGCCAAGCTTGAAAGTGCATGCCCACATACTGTTTCTTGTGCTGATATTGTTGCTATTGCTGCTAGAGATGTAGTAACTTTGTCTGGAGGCCCATATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCAAAGGCTTCTGAGACCATCAACTTGCCAGCTCCAACTTTCAATGTCTCCCAACTCATTCAGAGCTTTGCAAACAGAGGATTAGATGTTAAGGACATGGTTGCTCTATCTGGGGCTCACACACTTGGATTCTCACACTGTTCTTCCTTTCAATCACGACTTCGAAACTTCAGCGCGACTCATGAAATTGATCCTACTTTGGAATCTGGGTTTGCTCAAATTCTAAGAAACAAATGTCCAAAACCAAACGTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACTTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCTGATCAAGCTCTGTTTGTTGATTCTAGAACTAGAGGGCTTGTTGGGTTGTTTGCTCAAGATCAGAACTTGTTCTTTAAGGAGTTTGCAGCTTCAATGGTGAGTTTGGGTAATGTTGGGGTAATTCAGAATGGAAATGTCAGAATCGATTGCCGGGTGCCAAACTAA 951 42.48 MAKSASLLFLIMMVCLSEAVLDSHYYSKTCPNAENIILQTVYNASIHDPKVPARLLRLFFHDCFIRGCDGSVLIDSTPENQAEKDAPPNISLRSFYVIDEAKAKLESACPHTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISKASETINLPAPTFNVSQLIQSFANRGLDVKDMVALSGAHTLGFSHCSSFQSRLRNFSATHEIDPTLESGFAQILRNKCPKPNVDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQALFVDSRTRGLVGLFAQDQNLFFKEFAASMVSLGNVGVIQNGNVRIDCRVPN* 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12492194 12494638 - CsaV3_3G016670.1 Csa03g01667 522572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01667 316 Pfam Peroxidase 44 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Csa03g01667 316 Gene3D - 24 316 - -
Csa03g01667 316 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PANTHER PEROXIDASE 66 7 314 - -
Csa03g01667 316 CDD secretory_peroxidase 21 314 IPR033905 GO:0004601|GO:0042744
Csa03g01667 316 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 ProSiteProfiles Plant heme peroxidase family profile. 20 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 Gene3D Peroxidase, domain 2 156 297 - -
Csa03g01667 316 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa03g01667 316 PANTHER PEROXIDASE 25-RELATED 7 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01667 Csa-Chr3:12492194 Csa06g03357 Csa-Chr6:27981854 6.53E-117 dispersed
Csa04g02610 Csa-Chr4:25586011 Csa03g01667 Csa-Chr3:12492194 3.48E-83 dispersed
Csa03g01667 Csa-Chr3:12492194 Csa02g02696 Csa-Chr2:23513034 1.16E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01667 K00430 - csv:101210306 625.55