Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01719 ATGGTATTGTTTGGGAAAGTGGTGATTTCATGTTGGATTTTGCCAACTTTGGCTCATAAAAAATTGAAGAGAAATGGATTTGAAGGTCCTTCTCCTAGTTTCCCTCTTGGGAATATTACAGAAATGAAGAAGATAATGAAAGCTGCTGCTGCTGGCGGTGCTGCCATTAATGGATCATCATCAAATAATCTATCCCATGATATTCATTCAACTATTTTCCCTCACTTTGCTCAATGGCAGAATTCTTATGGGAAGAAGTTTGTATATTGGTTGGGGACAGAGCCATTTTTGTACATAGCAGATCCACAGCTTGTGAAGAAGATATCTGAAGCTGTGTTGGGTAAGAGTTGGGGGAAGCCAGCAGTGTTCAGAAACGACCGAGAACCGATGTTCGGCGATGGCCTTGTCATGACTGAGGGAGACAACTGGATTCGTCATCGCCATATCCTCACTCCCGCCTTCAACCCTGCTAATTTGAAGGCAATGACAAAATTCATGGTGGAGTCGACGAAAAAAATGCTAGAAGAATGGAGAAGGCAAGTAAAATCAGGGCAGTCAGAAATAGAGGTGGAAAGAGAAATAACGGCCACTGCGGGTGAAATAATCGCAAAAGCAAGCTTTGGAATATCCAAATGCGGCGGCGGTGGAGAAGCATTGAACAACCTGAGAGCTCTACAGTTAACTCTTTTTAAGAACAGTAGCTACGTGGGGGTCCCATTTAGCAGCCTAGTTCTTTACCCAGCACGAACCCTAGCCGCCAAGCGACTGGGTGCTCAAATCGACCGCCTATTTTTCTCCATCATATCTGATAGGAAAATTTCGGGTTCGGGTTCGGCATACTCGGATTTGCTGAGCAGGTTGATTGGGAGTGAGTATAAGGGCGGCGCGGGACTGAGTCCCAGAGAAGTGGTGGATGAGTGCAAGACATTTTTCTTTGGGGGACATGAGACCACAGCGCTGGCTATTAGTTGGACGTTGCTGTTGTTGGCCACGTCTCCCGATTGGCAAACCATTTTGCGAGATGAGATTAAAGAAGTGATTGGTGATAAAGATATTGATTTCTCCATGCTTTCTTCCCTCAAAAAGATGGGATGGGTATGGAATGAGGTACTTAGACTATACCCCTCAGCTCCAAACATACAAAGACAAGCAAAAGGAGACATCGATTTAGGGGACGTAAAGATCCCAAAGGGGACCAACATATGGATAGACATTGTTGCAATGCATCACGACCCCACCCTATGGGGCGACGATGTTAACGAGTTCAATCCAAAGAGGTTCCAACACGACACCATTCATGGTGGATGCAACCACAAAATGGGATATTTGCCTTTTGGCTTTGGAGGGAGAATGTGCATTGGCAGAAACTTATCTTCTATGGAGTATAAGATTGTCCTAACCCTAATTCTTTCTACCTTTTCACTCTCACTTTCTCCTTCTTACACCCATTCTCCTGCTACTTTACTCTCTCTGAGGCCCGCCCATGGCATTCCTCTCATTCTAACCCCTCTTCACCCTTAA 1521 45.1 MVLFGKVVISCWILPTLAHKKLKRNGFEGPSPSFPLGNITEMKKIMKAAAAGGAAINGSSSNNLSHDIHSTIFPHFAQWQNSYGKKFVYWLGTEPFLYIADPQLVKKISEAVLGKSWGKPAVFRNDREPMFGDGLVMTEGDNWIRHRHILTPAFNPANLKAMTKFMVESTKKMLEEWRRQVKSGQSEIEVEREITATAGEIIAKASFGISKCGGGGEALNNLRALQLTLFKNSSYVGVPFSSLVLYPARTLAAKRLGAQIDRLFFSIISDRKISGSGSAYSDLLSRLIGSEYKGGAGLSPREVVDECKTFFFGGHETTALAISWTLLLLATSPDWQTILRDEIKEVIGDKDIDFSMLSSLKKMGWVWNEVLRLYPSAPNIQRQAKGDIDLGDVKIPKGTNIWIDIVAMHHDPTLWGDDVNEFNPKRFQHDTIHGGCNHKMGYLPFGFGGRMCIGRNLSSMEYKIVLTLILSTFSLSLSPSYTHSPATLLSLRPAHGIPLILTPLHP* 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12874563 12878431 + CsaV3_3G017190.1 Csa03g01719 522624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01719 506 SUPERFAMILY Cytochrome P450 69 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 3 500 - -
Csa03g01719 506 Gene3D Cytochrome P450 12 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 Pfam Cytochrome P450 71 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g01719 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 3 500 - -
Csa03g01719 506 Coils Coil 167 187 - -
Csa03g01719 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01719 Csa-Chr3:12874563 Csa05g00465 Csa-Chr5:3021204 0 dispersed
Csa03g01719 Csa-Chr3:12874563 Csa02g00167 Csa-Chr2:1164961 7.33E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01719 - - csv:101220942 1003.82