Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01825 ATGGCTTCCCTCTCTATTGGGATTCATTTGCCCCCATCTCATCATTGGAAGAGATTTTCACTTCAGTCCCAGTCTCCCATTTCACTCCCATTTCACACTAGCTATGGTTCTTCATTAAATAGAGTCAGAACTCCAAGGTTGCTTGGTAAGAACCTTCTTGTGCGGGCTGAAGATGAGGATAAAAGCTCTTCTTCGTTTGAGCAACAGCAAGCTCCACCCAACTTCAGTAAACAACTGGAGGAACTCTCATCCAAGCCAGGAACATGTGATCCCCTATGCTCAGTTGATGAAGTAAGTTCACAGGATTTTGAAGATAGTTACCAGCCAAAGACTGATTTAGTCAAGGCTTTTGCAATATTTGCAGCTGCCCTTACTGGAACAGTGGCAATTAATCACTCCTGGGTTGCTGCGAATCAGGATCTTGCTATGGTGTTGTTGTTTGGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTGGGGTTATTGATGGCTGTTGGGTTATGGGTTATTCGAAGTATTGGGGCTCCATCCACTGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTATTTTTCTTACTCGGCGCAATGACCATAGTGGAGATCGTCGACGCCCATCAAGGATTTAAGTTGGTTACAGACGGTATAACCACTCGAAAACCACGAACTCTGCTCTGGGTGATTGGGTTTGTAACCTTTTTTCTAAGTTCAATCCTCGACAATCTGACAACCACAATTATCATGGTTTCTCTATTGCGAAAACTAGTTCCTCCATCAGAGTATCGCAAGCTACTTGGAGCTGTAATCGTCATAGCAGCAAATGCGGGTGGTGCGTGGACACCTATTGGAGATGTAACCACCACCATGTTGTGGATTCATGGTCAGATATCAACAATGCCAACACTCAAAGACTTGGTTATACCTTCTGCTGTTTCGCTTGCAGTACCGTTGGCCCTGCTGTCCCTTACAAGTGAAGTTAATGGGAAGGGACAGGATTTTTCCAATGTTATGGCGTCCGAGCAGATGGCTCCTCGAGGAAAGCTCGTCTTTTCTGTAGGTGTTGGAGCTTTAGTTTTTGTTCCAGTGTTCAAGGCCCTCACAGGCAAAGGTTGA 1155 44.76 MASLSIGIHLPPSHHWKRFSLQSQSPISLPFHTSYGSSLNRVRTPRLLGKNLLVRAEDEDKSSSSFEQQQAPPNFSKQLEELSSKPGTCDPLCSVDEVSSQDFEDSYQPKTDLVKAFAIFAAALTGTVAINHSWVAANQDLAMVLLFGIGYAGIIFEESLAFNKSGVGLLMAVGLWVIRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDGITTRKPRTLLWVIGFVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTMPTLKDLVIPSAVSLAVPLALLSLTSEVNGKGQDFSNVMASEQMAPRGKLVFSVGVGALVFVPVFKALTGKG* 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13989160 14000043 - CsaV3_3G018250.1 Csa03g01825 522730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01825 384 Pfam Citrate transporter 152 335 IPR004680 GO:0016021|GO:0055085
Csa03g01825 384 MobiDBLite consensus disorder prediction 59 83 - -
Csa03g01825 384 MobiDBLite consensus disorder prediction 65 83 - -
Csa03g01825 384 PANTHER BNAC03G40960D PROTEIN 1 382 - -
Csa03g01825 384 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 382 IPR045016 GO:0006814|GO:0015297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01825 - - csv:101221448 726.857