Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01914 ATGCAAAGACGGCAACAAATGATCAAGATTTTGAGTACCTTCCTTCTTCTTTGTTTACTCTCTATAACTTCAACCTCAGCAGCCACTCCAATCGCAAACCCCATATGCCCAATGGACCTTAACTATATCCTCAGAATCCCTTGGAATGCGACTGATTGCCAAAACCCCTTCTTTCAGACAACTGCCCAATCCGCCATGAATGATACCTCCAAAATCCCTTGTTGTCAAACCCTTTTGTCGTTGTTTGGAATTGCTTTGGCCCAACACCTCAAAGAGACTTCTCTTTTCAATCTCCCAGACCTCCCTACATCCAATTCCTGCCTTCGCGATTACCAATCGAAGCTCTCCTCGCTTTCCCTTCCCGATGACCTTGTATCCCATTGCTTTGATCCTTTGCAATTTGTGATATCTGCTAATGTCTGTGCTGGGATTCAAACTACTCAAGATTGGGTTTCGAAACTTGGTCAGAACTCGCCGCTTGATTCTGGGTGTAAGTCAGAACTGGTTGGTCCTGGTTGTGATGCTTGTCTCGCCGCTGGTTTGAAAGTTCAGACTATTTTGACTGGAATTGATGGTAATAAATCTCATTCTATGGATTGCTTTTACTTTGCTGTTCTTTATGCTGCTGGCATTGTTAATGAGTCTGGCCCTGAGGGCGACCCTGCATTAGATTGCATATTTAATTTGCCACTGAATATTGAAAAGGATTCAAAAAGTAAACACTCTGCTCTAGTTTATGGTCTTACTGCTGCTGCTATTGGAATTTTGGTTGTTTTTGTTCTGATGGGAATAGGATTTTGGTTTTTCAAATGGAAAAAACTGGCTGAGAAGTCTAGTTTAGAGTGTGATGTGGAGTTGGATGAACAAGGATCTAGGCCACATGCTAGGCCAAACACCGGATCAATTTGGTTTAAGATTCAGGAGCTTGAGAAGGCAACTGATAACTTTTCTTCAAAAAACTTCATCGGGAGAGGTGGGTTTGGTTTAGTTTACAAAGGGACATTACCTGATGGAAGTATGGTGGCAGTCAAGAAAGTAATTGAATCAGATTTTCAAGGCAATGCAGAGTTTTGCAATGAGGTTGAAATAATCAGTCATTTGAAGCATAGAAATCTTGTTCCACTTAGAGGTTGTTGTGTCATCGATGGGGATGACGGTTATGATGAGAGAGTCAGTGAGAGATACCTTGTTTATGATTACATGCCGAATGGAAATCTTGATGATTATTTGTTCCCTATACCATTTGATCAAGTTGGAACTGTTAAAAAATCATTGACGTGGCCTCAAAGGAAGAATATTATTTTGGATGTAGCAAAAGGCTTAGCTTATCTGCATTATGGAGTGAAACCTGCCATATATCACAGAGATATCAAGGCGACAAACATATTGCTAGATGCAGATATGAGAGCAAGAGTGGCGGATTTCGGGCTTGCCAAACAGAGCAGGGAAGGACAGTCTCATCTAACAACTCGAGTTGCAGGAACTCATGGTTATTTAGCCCCTGAATACGCACTTTATGGACAACTAACTGAGAAGAGTGATGTTTATAGCTTTGGAGTAGTTGTTTTGGAGATAATGTGTGGGAGAAAAGCTCTTGATTTCTCTTTGTCGTCATCACCACGTGCGTTCCTGATCACAGATTGGGCTTGGTCCTTGGTGAAAGCTGGAAAGATAGGAGATACTGTAGATCCTTCTCTACTGAAAGATGGAGACTCTTCTAACTCAAATCCTAGAGCCATTATGGAGAGATTCATTGCAGTTGGAATTTTATGTTCTCATGTGATGGTGGCTTTGAGACCCACCATTATGGAAGCTTTGAAAATGTTGGAAGGTGACATTGAAGTTCCCCAAATTTCTGATCGGCCGGTGCCTTATGGGCATCCTTCATTCGTTGGTGATGGCAGCAACTTCAGTATATCACCGACATTAAGTGGACATCAATTGCATAACGGTGATATGCTCAGATGA 1968 41.77 MQRRQQMIKILSTFLLLCLLSITSTSAATPIANPICPMDLNYILRIPWNATDCQNPFFQTTAQSAMNDTSKIPCCQTLLSLFGIALAQHLKETSLFNLPDLPTSNSCLRDYQSKLSSLSLPDDLVSHCFDPLQFVISANVCAGIQTTQDWVSKLGQNSPLDSGCKSELVGPGCDACLAAGLKVQTILTGIDGNKSHSMDCFYFAVLYAAGIVNESGPEGDPALDCIFNLPLNIEKDSKSKHSALVYGLTAAAIGILVVFVLMGIGFWFFKWKKLAEKSSLECDVELDEQGSRPHARPNTGSIWFKIQELEKATDNFSSKNFIGRGGFGLVYKGTLPDGSMVAVKKVIESDFQGNAEFCNEVEIISHLKHRNLVPLRGCCVIDGDDGYDERVSERYLVYDYMPNGNLDDYLFPIPFDQVGTVKKSLTWPQRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDFSLSSSPRAFLITDWAWSLVKAGKIGDTVDPSLLKDGDSSNSNPRAIMERFIAVGILCSHVMVALRPTIMEALKMLEGDIEVPQISDRPVPYGHPSFVGDGSNFSISPTLSGHQLHNGDMLR* 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14845713 14849046 + CsaV3_3G019140.1 Csa03g01914 522819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01914 655 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 653 - -
Csa03g01914 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Csa03g01914 655 Pfam SPARK 33 201 IPR043891 -
Csa03g01914 655 Gene3D Transferase(Phosphotransferase) domain 1 401 619 - -
Csa03g01914 655 ProSiteProfiles Protein kinase domain profile. 316 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g01914 655 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 19 653 - -
Csa03g01914 655 SMART serkin_6 316 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g01914 655 Pfam Protein kinase domain 318 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g01914 655 ProSitePatterns Protein kinases ATP-binding region signature. 322 345 IPR017441 GO:0005524
Csa03g01914 655 SUPERFAMILY Protein kinase-like (PK-like) 294 610 IPR011009 -
Csa03g01914 655 Gene3D Phosphorylase Kinase; domain 1 281 400 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01296 Csa-Chr1:8249052 Csa03g01914 Csa-Chr3:14845713 1.10E-115 dispersed
Csa03g01914 Csa-Chr3:14845713 Csa01g02289 Csa-Chr1:20029642 1.28E-77 dispersed
Csa03g01914 Csa-Chr3:14845713 Csa03g03960 Csa-Chr3:34624574 3.33E-77 transposed
Csa03g01914 Csa-Chr3:14845713 Csa03g03162 Csa-Chr3:29326367 8.52E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77999 PF00069 Pkinase 2.40E-42 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01914 - - csv:101212244 1294.26