Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01923 ATGGAACTTCAAGGAGGAAGGTCACTGGCTGAAACGCCTACCTACTCGGTTGCTTCTGTGGTTACTGTCATGGTCTTTGTCTGCTTGGTGGTGGAGCGGGCAATCTATAGGTTTGGAAAGTGGTTGAAGAAGACCAAGAGAAAGGCTCTGTTTGCTTCTTTGGAGAAGATTAAGGAAGAGCTGATGCTGCTTGGACTGATATCTTTGATGCTGGCACAATGTGCAAGGTGGATATCTGAAATTTGTGTGAACTCGTCCCTTTTCACCAGTAGATTCTACATTTGTTCAGAAGAAGATTATGCCACCAATGAACATATTCTGCTTGAAAGTTCTCTATTGTCTCATAATGAAATTGTCATTCCTCAAAGAGAATTAAGTGCTCTTCCGCATCAATGTGGTGAGGGTCGTGAGCCTTTTGTTTCATATGAGGGACTTGAACAACTTCACCGGTTCTTGTTTGTTCTTGGGATCACTCATGTTCTTTATAGCTGTCTAGCTGTTGGTCTGGCAATGAGTAAGATATACAGTTGGAGGAAATGGGAAAGTCAAGTTAAATTAGCTGCTGAAGATAATTTACCAGCTAAAAGAAATAAGGTCATGAGGCGGCAAACGACGTTTGTTTTCCATCACACATCTCATCCATGGAGCAGGAGTCGTATTCTCATATGGATGCTTTGTTTCCTACGTCAGTTCAAGAGTTCGATAAAGAAATCAGACTATTTGGCCCTCCGTTTGGGTTTCATTACAAAGCACAAATTACCGATCTCTTATGATTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCATGGAATCCTTGGAATTAGCTGGCCGCTATGGGGCTACGCCATTCTTTGCATCTTTGTCAACATTCACGGTTTAAATATCTACTTTTGGCTTTCTTTCATACCGGCTGCTCTTGTTATGCTCGTTGGGACAAAACTTCAACATGTTGTATCCTCTTTGGCTCTTGAAGTTTTGGAACAGAGAGGTGGGATTCAAATAAAACCAAGAGACGATCTGTTTTGGTTTGGAAAGCCTGTGATTTTACTACGGTTAATACAGTTCATCATATTTCAGAATGCATTTGAGATGGCGACATTTATCTGGTCCTTGTGGGGATTTAAGGAAAGATCTTGCTTCATGAAGAACGACTTTATGATAATCACGAGGTTGACTTCAGGTGTTCTTGTACAGTTTTGGTGCAGCTATAGCACTGTGCCACTTAATATAATTGTTACACAGATGGGATCCAAGTGTAAGAAAGCATTGGTGGCTGAGAGCGTGAGAGAGTCATTGCATAGTTGGTGCAAGAGAGTAAAGGAGAGGTCCAAACGTGACTCTGCACATTCCATCACTACAAGATCAGTATGTTCACTTGAATCAATGGTTGATGAACGAGATGAAATAACCATTGCTTCCGGTACGTTGTCACGGAGCTCATCTTTTGAGACCTCAAATCAGGTGACCGTACAATCTACTGCCCAACTAGAGGCTATTATTGAGTCTTCAAGCTTAAGGAGGCATGAAGAACTTCCCCCCACCATGGCGGATTTTCTATCACAATCTGCAAGAGTTTCTCATGCTAATGGCCTAGAAAATAATGCAGAGAGTGGCGAAGATAGCAAGGTCGAGTCACTTTTCGACTTGTTCAAAAGGACATGA 1671 42.13 MELQGGRSLAETPTYSVASVVTVMVFVCLVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLMLAQCARWISEICVNSSLFTSRFYICSEEDYATNEHILLESSLLSHNEIVIPQRELSALPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWESQVKLAAEDNLPAKRNKVMRRQTTFVFHHTSHPWSRSRILIWMLCFLRQFKSSIKKSDYLALRLGFITKHKLPISYDFHKYMVRSMEDEFHGILGISWPLWGYAILCIFVNIHGLNIYFWLSFIPAALVMLVGTKLQHVVSSLALEVLEQRGGIQIKPRDDLFWFGKPVILLRLIQFIIFQNAFEMATFIWSLWGFKERSCFMKNDFMIITRLTSGVLVQFWCSYSTVPLNIIVTQMGSKCKKALVAESVRESLHSWCKRVKERSKRDSAHSITTRSVCSLESMVDERDEITIASGTLSRSSSFETSNQVTVQSTAQLEAIIESSSLRRHEELPPTMADFLSQSARVSHANGLENNAESGEDSKVESLFDLFKRT* 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15003227 15016482 - CsaV3_3G019230.1 Csa03g01923 522828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01923 556 PANTHER MLO-LIKE PROTEIN 1 5 527 IPR004326 GO:0006952|GO:0016021
Csa03g01923 556 PANTHER MLO-LIKE PROTEIN 4 5 527 - -
Csa03g01923 556 Pfam Mlo family 7 462 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00073 Csa-Chr3:600368 Csa03g01923 Csa-Chr3:15003227 0 dispersed
Csa03g01923 Csa-Chr3:15003227 Csa04g02353 Csa-Chr4:23944644 1.92E-162 dispersed
Csa03g01923 Csa-Chr3:15003227 Csa06g01679 Csa-Chr6:14713131 1.01E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01923 K08472 - csv:101204236 1070.84