Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g01952 ATGAGATCTCTACTGGTCTCAGAGGTGATGGTGCTTAATCTTCTCAAACCATCTTTATCTTTCCTCGTATGGATATTATTGAGTTCTTTGCTCTCTTTTTCTCTGGGTTTGAAACAGTCTAATCAAATCTGTGATTCAAAAGATTTATTGGCATTGAGGGGCTTTGTGAATAGCCTCGCAAATAATTCTGTTCTCTCTGTTTGGTTAAATGAATCCAACTGCTGCAATTGGGACGGTGTGGATTGTGGATATGATGGCAACAGCTCGATTACTAACAGAGTTACCAAGTTGGAACTGCCTAATTTGAATCTGAAAGGCAAGGTTTCACAATCACTTGGTGGTTTAGATCAGTTAATTTGGCTGAATCTATCATACAATCAGCTTGAAGGTGTATTGCCAACAGAATTCTCAAGCTTGAAGCAACTCCAGGTTTTGGATTTAAGTTACAACAAACTGTCAGGACCAGTCACAAATGCAACTTCAGGATTGATATCTGTTCGTGTTCTGAATATTTCCAGCAATTTATTCGTTGGGGATTTTCCTCAGCTTGTGGGATTTCAAAATCTTGTTGCCTTCAACATAAGTAACAATTCTTTCACAGGCCAGCTTTCATCACAGATTTGCAATTCCTCCAACATGATTCAGTTTGTTGATATTTCACTGAACCAAATATCCGGCAATCTTCGAGGTGTTGACAGTTGCAGCAAATCTCTCAAACATTTCCGTGCAGACAGTAATTTACTTACCGGCCATCTGCCAGGTTCGTTGTATTCATTATCATCCATGGAGTATTTTTCAATTCCTGGGAACAGCTTCTTTGGCCAGTTAAGCATGGAACTGAGTAAGCTTTCTAGGCTTAAATCCTTTATAGTATTTGGAAACAAGTTTTCTGGTGAACTTCCAAATGTATTTGGTAATTTTTCAGAATTAGAGGAGTTAGTTGCACACTCCAACAAGTTCTCTGGATTATTGCCTTCATCTCTGTCATTGTGCTCAAAGCTTAGAGTGTTTGATCTTAGAAATAATTCTTTAACTGGTACTGTAGATCTTAACTTTTCTACGCTACCAGATCTTCAAATGCTTGATCTAGCCTCAAATCACTTTTCCGGCCCTCTACCAAATTCTCTATCTGATTGCCATGAACTGAAAACTCTTAGCCTTGCCAGGAACAAGTTAACTGGTCAAATTCCTCGAGATTATGCAAAGCTCTCCTCTCTGTCGTTTCTATCTTTGTCGAACAACAGTATCATAGATTTGAGTGGTGCACTATCTACTTTACAGAATTGCAAAAACCTCACTGTTCTCATTCTTACAAAGAACTTTCGTAATGAGGAAATCCCACAGAGCGAAACTGTTTTCAACAATTTGATGCTTTTGGCATTTGGTAACTGTGGTCTAAAAGGACAAATTCCAGGTTGGTTAGTTGGTTGCAAGAAACTAAGCATCCTCGACTTGTCTTGGAATCACTTAAATGGAAGTATCCCTGCTTGGATAGGTCAGCTGGAGAATTTGTTTTACTTGGACTTATCCAACAATTCACTGACTGGAGAAATCCCAAAAAGCTTGACACAGATGAAAGCACTAATTTCCAAAAATGGCAGCTTGTCGGGTTCGACATCTTCTGCTGGAATCCCCCTTTTTGTCAAACGAAATCAAAGTGCCACTGGTCTGCAATACAACCAAGCATCAAGCTTTCCACCATCGATTTACTTGAGCTACAACAGAATTAATGGAACTATTTTTCCGGAAATTGGCAGATTAAAATGGCTGCACGTCTTGGATTTGAGTAGGAATAATATTACTGGCTTCATCCCAGGCACCATATCAGAAATGGAGAACTTGGAAACACTAGATTTGTCAAATAATGACCTTTATGGACAAATTCCACCATCACTCAACAAGCTCACATTCTTGTCAAAGTTTAGCGTGGCAAATAATCACTTGGTGGGACCAATTCCTAGTGGAGGGCAATTCTTAAGCTTTCCCAGCTCCAGCTTTGACGGTAATATAGGACTTTGTGGGGAAATTGATAACCCTTGTCACTCTGGTGATGGGTTAGAAACAAAACCCGAAACCAACAAATTTTCAAAGAGAAGAGTCAATTTCATTCTTTGCCTTACAGTCGGTGCAGCTGCAGCAATCCTCCTGCTGCTTACAGTGGTTCTACTCAAAATTTCCAGAAAAGATGTTGGAGATAGACGAAATAATCGTTTTGATGAGGAATTTGACAGGGCTGACAGGTTATCTGGAGCTCTTGGATCGTCAAAGTTGGTGCTCTTTCAGAATTCAGAATGCAAGGATCTTACAGTTGCTGAGTTGTTAAAAGCCACTTGCAATTTCAACCAAGCAAACATAATCGGCTGTGGTGGATTTGGCTTGGTTTACAAAGCCAGCCTTCCCAATGGTTCAAAAGCTGCAGTCAAGAGGCTTACAGGAGATTGTGGTCAAATGGAACGGGAATTCCAAGCTGAAGTAGAAGCTCTTTCTCGAGCGCAGCATAAGAACCTTGTTTCTCTTCAAGGTTATTGCAAACATGGAAATGACAGGCTATTAATTTACTCCTACATGGAAAATGGAAGTTTGGACTATTGGCTTCACGAGGTTGTTGATAATGATTCAATACTAAAATGGGAAACAAGACTCAAAATTGCACAGGGTGCTGCTCACGGATTGGCTTACTTGCATAAGGAATGTCAGCCCAACATAATTCACCGAGATGTAAAATCCAGCAACATACTTCTAGATGACAGATTTGAGGCTCATTTAGCTGATTTTGGTCTTTCACGATTACTCCGTCCGTATGACACTCATGTTACCACGGACTTGGTTGGGACTTTGGGTTATATTCCTCCTGAATACAGCCAGACATTGACTGCAACCTGCAGGGGTGATGTTTACAGTTTTGGCGTTGTTCTCCTTGAGCTTCTTACTGGTCGTAGGCCTGTAGAGGTATGCAAAGGTAAAGCCTGCAGGGATTTGGTGTCTTGGGTGATTCAAAAGAAATCAGAAAAGAGAGAAGAGGAGATTATTGATCCTGCACTTTGGAATACAAATAGCAAAAAACAGATTTTAGAGGTTCTTGGTATTACTTGTAAATGCATAGAACAAGATCCAAGGAAGAGACCTTCGATTGAAGAAGTTTCTTCATGGCTAGATGGTGTAACATCGTAA 3171 40.15 MRSLLVSEVMVLNLLKPSLSFLVWILLSSLLSFSLGLKQSNQICDSKDLLALRGFVNSLANNSVLSVWLNESNCCNWDGVDCGYDGNSSITNRVTKLELPNLNLKGKVSQSLGGLDQLIWLNLSYNQLEGVLPTEFSSLKQLQVLDLSYNKLSGPVTNATSGLISVRVLNISSNLFVGDFPQLVGFQNLVAFNISNNSFTGQLSSQICNSSNMIQFVDISLNQISGNLRGVDSCSKSLKHFRADSNLLTGHLPGSLYSLSSMEYFSIPGNSFFGQLSMELSKLSRLKSFIVFGNKFSGELPNVFGNFSELEELVAHSNKFSGLLPSSLSLCSKLRVFDLRNNSLTGTVDLNFSTLPDLQMLDLASNHFSGPLPNSLSDCHELKTLSLARNKLTGQIPRDYAKLSSLSFLSLSNNSIIDLSGALSTLQNCKNLTVLILTKNFRNEEIPQSETVFNNLMLLAFGNCGLKGQIPGWLVGCKKLSILDLSWNHLNGSIPAWIGQLENLFYLDLSNNSLTGEIPKSLTQMKALISKNGSLSGSTSSAGIPLFVKRNQSATGLQYNQASSFPPSIYLSYNRINGTIFPEIGRLKWLHVLDLSRNNITGFIPGTISEMENLETLDLSNNDLYGQIPPSLNKLTFLSKFSVANNHLVGPIPSGGQFLSFPSSSFDGNIGLCGEIDNPCHSGDGLETKPETNKFSKRRVNFILCLTVGAAAAILLLLTVVLLKISRKDVGDRRNNRFDEEFDRADRLSGALGSSKLVLFQNSECKDLTVAELLKATCNFNQANIIGCGGFGLVYKASLPNGSKAAVKRLTGDCGQMEREFQAEVEALSRAQHKNLVSLQGYCKHGNDRLLIYSYMENGSLDYWLHEVVDNDSILKWETRLKIAQGAAHGLAYLHKECQPNIIHRDVKSSNILLDDRFEAHLADFGLSRLLRPYDTHVTTDLVGTLGYIPPEYSQTLTATCRGDVYSFGVVLLELLTGRRPVEVCKGKACRDLVSWVIQKKSEKREEEIIDPALWNTNSKKQILEVLGITCKCIEQDPRKRPSIEEVSSWLDGVTS* 1057
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 15396212 15399382 + CsaV3_3G019520.1 Csa03g01952 522857

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Csa03g01952 1056 Pfam Leucine Rich Repeat 503 522 IPR001611 GO:0005515
Csa03g01952 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 448 - -
Csa03g01952 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 457 526 - -
Csa03g01952 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 623 1053 - -
Csa03g01952 1056 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 570 627 - -
Csa03g01952 1056 SUPERFAMILY L domain-like 557 673 - -
Csa03g01952 1056 ProSiteProfiles Leucine-rich repeat profile. 405 427 IPR001611 GO:0005515
Csa03g01952 1056 SUPERFAMILY L domain-like 248 526 - -
Csa03g01952 1056 Gene3D Ribonuclease Inhibitor 377 685 IPR032675 -
Csa03g01952 1056 PRINTS Leucine-rich repeat signature 504 517 - -
Csa03g01952 1056 PRINTS Leucine-rich repeat signature 611 624 - -
Csa03g01952 1056 ProSiteProfiles Protein kinase domain profile. 780 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g01952 1056 Gene3D Transferase(Phosphotransferase) domain 1 856 1055 - -
Csa03g01952 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 623 1053 - -
Csa03g01952 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 570 627 - -
Csa03g01952 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 457 526 - -
Csa03g01952 1056 PANTHER PHYTOSULFOKINE RECEPTOR 2 42 448 - -
Csa03g01952 1056 SUPERFAMILY L domain-like 44 313 - -
Csa03g01952 1056 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Csa03g01952 1056 Pfam Leucine rich repeat 569 624 IPR001611 GO:0005515
Csa03g01952 1056 Gene3D Ribonuclease Inhibitor 304 376 IPR032675 -
Csa03g01952 1056 ProSiteProfiles Leucine-rich repeat profile. 613 636 IPR001611 GO:0005515
Csa03g01952 1056 SMART LRR_typ_2 307 330 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 611 635 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 139 162 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 355 379 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 115 138 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 587 610 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 501 525 IPR003591 -
Csa03g01952 1056 SMART LRR_typ_2 403 426 IPR003591 -
Csa03g01952 1056 ProSitePatterns Protein kinases ATP-binding region signature. 786 808 IPR017441 GO:0005524
Csa03g01952 1056 ProSitePatterns Serine/Threonine protein kinases active-site signature. 902 914 IPR008271 GO:0004672|GO:0006468
Csa03g01952 1056 CDD STKc_IRAK 786 1047 - -
Csa03g01952 1056 Gene3D Ribonuclease Inhibitor 163 231 IPR032675 -
Csa03g01952 1056 Gene3D Ribonuclease Inhibitor 232 303 IPR032675 -
Csa03g01952 1056 Gene3D Ribonuclease Inhibitor 45 162 IPR032675 -
Csa03g01952 1056 Pfam Protein kinase domain 781 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g01952 1056 SUPERFAMILY Protein kinase-like (PK-like) 761 1051 IPR011009 -
Csa03g01952 1056 Pfam Leucine rich repeat N-terminal domain 46 82 IPR013210 -
Csa03g01952 1056 Gene3D Phosphorylase Kinase; domain 1 746 855 - -
Csa03g01952 1056 SMART serkin_6 780 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g01952 - - - cmo:103496072 2006.88
       

Dupl-types


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01952 Csa-Chr3:15396212 Csa05g00977 Csa-Chr5:8900193 0 dispersed
Csa06g00506 Csa-Chr6:4282021 Csa03g01952 Csa-Chr3:15396212 2.42E-73 dispersed
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa02g00136 CCT 65 423 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-43 174.1
Csa01g02065 CCT 8 218 Trihelix Transcription Factor Family AT1G12040 57.8 5.6e-38 156.4
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT4G18670 81.0 3.3e-66 250.4
Csa01g02065 CCT 23 391 Trihelix Transcription Factor Family AT4G18670 83.8 1.1e-64 245.4
Csa06g00076 . 26 224 Trihelix Transcription Factor Family AT4G18670 57.8 3.3e-42 170.6
Csa06g00075 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00077 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00073 . 33 157 Trihelix Transcription Factor Family AT4G18670 61.9 1.4e-37 155.2
Csa06g00076 . 13 419 Trihelix Transcription Factor Family AT3G19020 65.3 2.1e-58 224.6
Csa06g00073 . 32 421 Trihelix Transcription Factor Family AT3G19020 63.5 1.6e-53 208.4
Csa06g00075 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa06g00077 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa01g02065 CCT 2 218 Trihelix Transcription Factor Family AT3G19020 67.6 1.6e-42 171.8
Csa02g00136 CCT 42 239 Trihelix Transcription Factor Family AT3G19020 66.0 1.2e-40 165.6
Csa06g00076 . 67 400 Trihelix Transcription Factor Family AT1G49490 69.6 1.6e-49 194.9
Csa06g00073 . 69 402 Trihelix Transcription Factor Family AT1G49490 65.8 2.7e-44 177.6
Csa06g00075 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa06g00077 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa01g02065 CCT 55 392 Trihelix Transcription Factor Family AT1G49490 75.7 8.1e-41 166.0
Csa02g00136 CCT 76 408 Trihelix Transcription Factor Family AT1G49490 73.6 1.1e-40 165.6
Csa06g00073 . 32 425 Trihelix Transcription Factor Family AT2G15880 63.7 4.5e-64 243.0
Csa06g00076 . 26 400 Trihelix Transcription Factor Family AT2G15880 67.4 1.7e-63 241.1
Csa06g00075 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa06g00077 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa01g02065 CCT 25 396 Trihelix Transcription Factor Family AT2G15880 68.6 1.4e-41 168.3
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT2G15880 64.8 2.0e-40 164.5
Csa06g00076 . 13 411 Trihelix Transcription Factor Family AT4G33970 64.4 1.1e-59 228.4
Csa06g00073 . 29 413 Trihelix Transcription Factor Family AT4G33970 63.1 1.6e-55 214.5
Csa06g00075 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa06g00077 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa02g01808 . 1 202 Trihelix Transcription Factor Family AT1G13450 62.9 6.1e-68 254.2
Csa03g03064 CCT 56 304 Trihelix Transcription Factor Family AT5G01380 60.1 1.9e-54 209.9
Csa05g00132 . 95 607 Trihelix Transcription Factor Family AT1G33240 52.4 6.9e-87 318.5
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT4G18670 81.0 3.3e-66 250.4
Csa01g02065 CCT 23 391 Trihelix Transcription Factor Family AT4G18670 83.8 1.1e-64 245.4
Csa06g00076 . 26 224 Trihelix Transcription Factor Family AT4G18670 57.8 3.3e-42 170.6
Csa06g00075 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00077 . 15 224 Trihelix Transcription Factor Family AT4G18670 56.7 4.8e-41 166.8
Csa06g00073 . 33 157 Trihelix Transcription Factor Family AT4G18670 61.9 1.4e-37 155.2
Csa06g00076 . 13 411 Trihelix Transcription Factor Family AT4G33970 64.4 1.1e-59 228.4
Csa06g00073 . 29 413 Trihelix Transcription Factor Family AT4G33970 63.1 1.6e-55 214.5
Csa06g00075 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa06g00077 . 13 225 Trihelix Transcription Factor Family AT4G33970 56.3 1.1e-43 175.3
Csa06g00403 . 59 565 Trihelix Transcription Factor Family AT1G76880 59.5 4.3e-113 405.6
Csa06g00402 . 51 490 Trihelix Transcription Factor Family AT1G76880 58.3 8.8e-90 328.2
Csa05g00132 . 95 581 Trihelix Transcription Factor Family AT1G76880 52.4 6.5e-85 312.0
Csa03g03386 . 96 362 Trihelix Transcription Factor Family AT3G10000 53.4 2.5e-63 240.0
Csa06g00076 . 13 419 Trihelix Transcription Factor Family AT3G19020 65.3 2.1e-58 224.6
Csa06g00073 . 32 421 Trihelix Transcription Factor Family AT3G19020 63.5 1.6e-53 208.4
Csa06g00075 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa06g00077 . 13 224 Trihelix Transcription Factor Family AT3G19020 63.7 7.3e-51 199.5
Csa01g02065 CCT 2 218 Trihelix Transcription Factor Family AT3G19020 67.6 1.6e-42 171.8
Csa02g00136 CCT 42 239 Trihelix Transcription Factor Family AT3G19020 66.0 1.2e-40 165.6
Csa06g00076 . 67 400 Trihelix Transcription Factor Family AT1G49490 69.6 1.6e-49 194.9
Csa06g00073 . 69 402 Trihelix Transcription Factor Family AT1G49490 65.8 2.7e-44 177.6
Csa06g00075 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa06g00077 . 6 224 Trihelix Transcription Factor Family AT1G49490 55.3 9.6e-42 169.1
Csa01g02065 CCT 55 392 Trihelix Transcription Factor Family AT1G49490 75.7 8.1e-41 166.0
Csa02g00136 CCT 76 408 Trihelix Transcription Factor Family AT1G49490 73.6 1.1e-40 165.6
Csa05g03083 . 323 711 Trihelix Transcription Factor Family AT1G68690 63.9 1.5e-138 490.3
Csa05g02558 . 279 655 Trihelix Transcription Factor Family AT1G68690 65.6 2.8e-137 486.1
Csa05g02336 . 293 679 Trihelix Transcription Factor Family AT1G68690 59.4 1.6e-124 443.7
Csa01g01727 CCT 251 539 Trihelix Transcription Factor Family AT1G68690 66.1 2.1e-113 406.8
Csa02g00125 CCT 284 571 Trihelix Transcription Factor Family AT1G68690 64.9 4.0e-112 402.5
Csa02g01248 . 292 579 Trihelix Transcription Factor Family AT1G68690 63.7 3.3e-106 382.9
Csa04g00511 . 273 560 Trihelix Transcription Factor Family AT1G68690 60.2 4.9e-102 369.0
Csa04g00130 . 352 640 Trihelix Transcription Factor Family AT1G68690 55.5 1.6e-84 310.8
Csa03g02648 . 359 639 Trihelix Transcription Factor Family AT1G68690 56.7 2.1e-84 310.5
Csa03g04090 . 393 671 Trihelix Transcription Factor Family AT1G68690 54.8 4.6e-84 309.3
Csa01g02931 . 638 919 Trihelix Transcription Factor Family AT1G68690 55.4 1.3e-81 301.2
Csa07g02390 . 492 773 Trihelix Transcription Factor Family AT1G68690 54.4 3.4e-79 293.1
Csa03g01426 . 76 360 Trihelix Transcription Factor Family AT1G68690 51.4 3.2e-77 286.6
Csa06g00794 . 71 355 Trihelix Transcription Factor Family AT1G68690 50.3 7.2e-77 285.4
Csa03g03235 . 46 350 Trihelix Transcription Factor Family AT1G68690 50.8 2.7e-76 283.5
Csa04g02704 . 55 336 Trihelix Transcription Factor Family AT1G68690 50.2 4.6e-76 282.7
Csa05g00641 . 67 351 Trihelix Transcription Factor Family AT1G68690 50.7 1.8e-75 280.8
Csa07g01190 . 717 993 Trihelix Transcription Factor Family AT1G68690 50.4 1.3e-70 264.6
Csa05g02558 . 279 601 Trihelix Transcription Factor Family AT1G26150 66.8 5.3e-117 418.7
Csa05g03083 . 324 657 Trihelix Transcription Factor Family AT1G26150 64.6 3.4e-116 416.0
Csa05g02336 . 299 625 Trihelix Transcription Factor Family AT1G26150 58.3 2.6e-100 363.2
Csa01g01727 CCT 203 485 Trihelix Transcription Factor Family AT1G26150 60.0 8.0e-97 351.7
Csa02g00125 CCT 283 517 Trihelix Transcription Factor Family AT1G26150 68.1 4.0e-96 349.4
Csa02g01248 . 293 524 Trihelix Transcription Factor Family AT1G26150 68.2 1.4e-93 340.9
Csa04g00511 . 273 506 Trihelix Transcription Factor Family AT1G26150 65.1 1.2e-92 337.8
Csa01g02931 . 631 868 Trihelix Transcription Factor Family AT1G26150 59.2 9.2e-77 285.0
Csa03g04090 . 386 621 Trihelix Transcription Factor Family AT1G26150 55.5 1.9e-74 277.3
Csa04g00130 . 353 589 Trihelix Transcription Factor Family AT1G26150 59.7 1.2e-73 274.6
Csa03g03235 . 31 290 Trihelix Transcription Factor Family AT1G26150 53.1 3.6e-73 273.1
Csa07g01264 . 126 370 Trihelix Transcription Factor Family AT1G26150 52.8 5.2e-72 269.2
Csa07g02390 . 466 722 Trihelix Transcription Factor Family AT1G26150 53.3 1.2e-71 268.1
Csa02g01935 . 169 398 Trihelix Transcription Factor Family AT1G26150 53.5 7.5e-71 265.4
Csa06g01959 . 59 288 Trihelix Transcription Factor Family AT1G26150 56.1 2.9e-70 263.5
Csa05g00977 . 720 949 Trihelix Transcription Factor Family AT1G26150 54.3 6.4e-70 262.3
Csa06g01183 . 170 399 Trihelix Transcription Factor Family AT1G26150 55.6 8.3e-70 261.9
Csa03g00872 . 146 375 Trihelix Transcription Factor Family AT1G26150 52.2 1.4e-69 261.2
Csa06g00794 . 67 302 Trihelix Transcription Factor Family AT1G26150 54.2 1.8e-69 260.8
Csa03g01426 . 74 307 Trihelix Transcription Factor Family AT1G26150 55.6 7.0e-69 258.8
Csa05g00641 . 67 298 Trihelix Transcription Factor Family AT1G26150 56.0 7.0e-69 258.8
Csa06g02950 . 175 404 Trihelix Transcription Factor Family AT1G26150 51.3 2.0e-68 257.3
Csa07g01177 . 182 411 Trihelix Transcription Factor Family AT1G26150 54.7 2.0e-68 257.3
Csa01g01277 . 78 321 Trihelix Transcription Factor Family AT1G26150 53.3 4.6e-68 256.1
Csa07g01190 . 717 946 Trihelix Transcription Factor Family AT1G26150 55.2 5.9e-68 255.8
Csa06g00019 . 162 390 Trihelix Transcription Factor Family AT1G26150 54.8 7.8e-68 255.4
Csa04g00173 . 13 257 Trihelix Transcription Factor Family AT1G26150 50.6 1.7e-67 254.2
Csa04g02704 . 55 284 Trihelix Transcription Factor Family AT1G26150 53.9 2.3e-67 253.8
Csa07g01499 . 98 332 Trihelix Transcription Factor Family AT1G26150 52.3 1.1e-66 251.5
Csa06g02561 . 30 267 Trihelix Transcription Factor Family AT1G26150 50.8 1.6e-65 247.7
Csa01g02799 . 130 362 Trihelix Transcription Factor Family AT1G26150 50.2 3.1e-64 243.4
Csa05g01091 . 694 928 Trihelix Transcription Factor Family AT1G26150 51.9 5.2e-64 242.7
Csa05g03065 . 282 521 Trihelix Transcription Factor Family AT1G26150 50.2 8.9e-64 241.9
Csa05g01367 . 269 496 Trihelix Transcription Factor Family AT1G26150 50.4 5.8e-63 239.2
Csa03g01694 . 1018 1247 Trihelix Transcription Factor Family AT1G26150 50.9 7.5e-63 238.8
Csa06g00289 . 292 524 Trihelix Transcription Factor Family AT1G26150 50.6 1.7e-62 237.7
Csa03g04036 . 62 296 Trihelix Transcription Factor Family AT1G26150 50.2 3.7e-62 236.5
Csa03g01952 . 772 1000 Trihelix Transcription Factor Family AT1G26150 51.5 4.9e-62 236.1
Csa07g00530 . 251 483 Trihelix Transcription Factor Family AT1G26150 51.1 6.4e-62 235.7
Csa05g02336 . 297 575 Trihelix Transcription Factor Family AT1G23540 65.2 6.4e-100 361.7
Csa01g01727 CCT 226 435 Trihelix Transcription Factor Family AT1G23540 67.1 9.9e-77 284.6
Csa04g00511 . 270 457 Trihelix Transcription Factor Family AT1G23540 70.7 7.1e-75 278.5
Csa05g03083 . 430 607 Trihelix Transcription Factor Family AT1G23540 72.5 3.5e-74 276.2
Csa02g00125 CCT 284 467 Trihelix Transcription Factor Family AT1G23540 69.6 2.3e-73 273.5
Csa02g01248 . 289 476 Trihelix Transcription Factor Family AT1G23540 67.0 1.6e-71 267.3
Csa05g02558 . 365 551 Trihelix Transcription Factor Family AT1G23540 67.4 8.1e-71 265.0
Csa07g01177 . 169 361 Trihelix Transcription Factor Family AT1G23540 52.6 5.8e-53 205.7
Csa06g01183 . 142 349 Trihelix Transcription Factor Family AT1G23540 50.7 1.3e-52 204.5
Csa03g04035 . 642 824 Trihelix Transcription Factor Family AT1G23540 53.6 2.9e-52 203.4
Csa07g01264 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.9 2.9e-52 203.4
Csa02g01935 . 158 348 Trihelix Transcription Factor Family AT1G23540 51.0 1.9e-51 200.7
Csa03g02986 . 615 797 Trihelix Transcription Factor Family AT1G23540 52.5 7.1e-51 198.7
Csa05g03065 . 294 470 Trihelix Transcription Factor Family AT1G23540 57.5 7.1e-51 198.7
Csa06g02950 . 164 354 Trihelix Transcription Factor Family AT1G23540 51.0 7.1e-51 198.7
Csa01g02931 . 625 818 Trihelix Transcription Factor Family AT1G23540 52.3 1.2e-50 198.0
Csa03g00872 . 135 325 Trihelix Transcription Factor Family AT1G23540 50.5 1.2e-50 198.0
Csa06g00019 . 149 340 Trihelix Transcription Factor Family AT1G23540 52.1 3.5e-50 196.4
Csa01g01919 . 281 458 Trihelix Transcription Factor Family AT1G23540 55.0 6.0e-50 195.7
Csa03g04090 . 385 571 Trihelix Transcription Factor Family AT1G23540 50.8 1.3e-49 194.5
Csa05g02551 . 291 467 Trihelix Transcription Factor Family AT1G23540 54.2 1.8e-49 194.1
Csa03g02648 . 359 538 Trihelix Transcription Factor Family AT1G23540 53.9 2.3e-49 193.7
Csa05g01367 . 269 445 Trihelix Transcription Factor Family AT1G23540 54.2 2.3e-49 193.7
Csa07g02390 . 491 672 Trihelix Transcription Factor Family AT1G23540 52.7 3.0e-49 193.4
Csa01g02911 . 342 527 Trihelix Transcription Factor Family AT1G23540 50.5 5.1e-49 192.6
Csa04g00173 . 28 207 Trihelix Transcription Factor Family AT1G23540 53.3 8.7e-49 191.8
Csa07g01190 . 717 894 Trihelix Transcription Factor Family AT1G23540 52.8 8.7e-49 191.8
Csa04g00762 . 34 213 Trihelix Transcription Factor Family AT1G23540 51.1 1.1e-48 191.4
Csa04g02704 . 55 235 Trihelix Transcription Factor Family AT1G23540 52.7 1.1e-48 191.4
Csa05g01091 . 699 876 Trihelix Transcription Factor Family AT1G23540 51.1 1.6e-47 187.6
Csa06g00289 . 292 472 Trihelix Transcription Factor Family AT1G23540 53.6 1.6e-47 187.6
Csa02g01758 . 286 466 Trihelix Transcription Factor Family AT1G23540 51.4 2.2e-47 187.2
Csa03g04172 . 399 583 Trihelix Transcription Factor Family AT1G23540 51.1 2.2e-47 187.2
Csa04g00130 . 352 539 Trihelix Transcription Factor Family AT1G23540 52.7 4.8e-47 186.0
Csa04g00931 . 278 458 Trihelix Transcription Factor Family AT1G23540 53.6 6.3e-47 185.7
Csa03g01694 . 1018 1193 Trihelix Transcription Factor Family AT1G23540 51.1 1.1e-46 184.9
Csa03g01952 . 772 947 Trihelix Transcription Factor Family AT1G23540 52.8 2.4e-46 183.7
Csa06g02833 . 875 1054 Trihelix Transcription Factor Family AT1G23540 52.2 2.4e-46 183.7
Csa03g03354 . 334 511 Trihelix Transcription Factor Family AT1G23540 50.6 3.1e-46 183.3
Csa07g02075 . 802 977 Trihelix Transcription Factor Family AT1G23540 51.1 3.1e-46 183.3
Csa04g02262 . 646 830 Trihelix Transcription Factor Family AT1G23540 50.3 5.3e-46 182.6
Csa02g01808 . 1 378 Trihelix Transcription Factor Family AT3G25990 66.2 2.3e-141 498.8
Csa02g00136 CCT 65 423 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-43 174.1
Csa01g02065 CCT 8 218 Trihelix Transcription Factor Family AT1G12040 57.8 5.6e-38 156.4
Csa03g03064 CCT 39 308 Trihelix Transcription Factor Family AT2G38250 58.4 1.5e-58 223.4
Csa05g03083 . 323 759 Trihelix Transcription Factor Family AT5G38560 70.6 7.2e-173 604.4
Csa05g02558 . 279 713 Trihelix Transcription Factor Family AT5G38560 61.7 1.0e-147 520.8
Csa05g02336 . 295 747 Trihelix Transcription Factor Family AT5G38560 56.1 1.0e-139 494.2
Csa01g01727 CCT 221 605 Trihelix Transcription Factor Family AT5G38560 57.4 1.4e-123 440.7
Csa02g00125 CCT 232 626 Trihelix Transcription Factor Family AT5G38560 56.3 2.2e-121 433.3
Csa02g01248 . 296 644 Trihelix Transcription Factor Family AT5G38560 60.5 3.4e-114 409.5
Csa04g00511 . 277 608 Trihelix Transcription Factor Family AT5G38560 61.8 5.8e-114 408.7
Csa04g00130 . 356 671 Trihelix Transcription Factor Family AT5G38560 51.3 1.8e-83 307.4
Csa03g04090 . 392 676 Trihelix Transcription Factor Family AT5G38560 52.9 3.1e-83 306.6
Csa01g02931 . 638 923 Trihelix Transcription Factor Family AT5G38560 54.0 6.4e-81 298.9
Csa07g02390 . 492 788 Trihelix Transcription Factor Family AT5G38560 50.8 1.8e-78 290.8
Csa07g01177 . 181 466 Trihelix Transcription Factor Family AT5G38560 50.2 2.0e-74 277.3
Csa06g01959 . 59 347 Trihelix Transcription Factor Family AT5G38560 50.9 7.6e-74 275.4
Csa02g00125 CCT 250 651 Trihelix Transcription Factor Family AT4G32710 59.0 1.5e-123 440.7
Csa01g01727 CCT 222 617 Trihelix Transcription Factor Family AT4G32710 59.9 2.1e-122 436.8
Csa02g01248 . 299 648 Trihelix Transcription Factor Family AT4G32710 60.7 1.2e-112 404.4
Csa04g00511 . 280 593 Trihelix Transcription Factor Family AT4G32710 63.2 2.4e-110 396.7
Csa05g02336 . 351 735 Trihelix Transcription Factor Family AT4G32710 55.0 3.3e-107 386.3
Csa05g03083 . 430 728 Trihelix Transcription Factor Family AT4G32710 62.3 3.4e-104 376.3
Csa05g02558 . 346 660 Trihelix Transcription Factor Family AT4G32710 60.6 2.4e-102 370.2
Csa04g02704 . 55 341 Trihelix Transcription Factor Family AT4G32710 50.3 5.9e-72 269.2
Csa05g02336 . 298 735 Trihelix Transcription Factor Family AT1G70460 69.8 1.5e-168 590.1
Csa05g03083 . 430 757 Trihelix Transcription Factor Family AT1G70460 71.6 1.5e-136 483.8
Csa02g00125 CCT 282 634 Trihelix Transcription Factor Family AT1G70460 64.3 5.6e-128 455.3
Csa01g01727 CCT 246 606 Trihelix Transcription Factor Family AT1G70460 63.2 9.6e-128 454.5
Csa05g02558 . 365 710 Trihelix Transcription Factor Family AT1G70460 64.6 1.5e-125 447.2
Csa04g00511 . 270 615 Trihelix Transcription Factor Family AT1G70460 64.1 1.2e-122 437.6
Csa02g01248 . 291 628 Trihelix Transcription Factor Family AT1G70460 63.4 4.0e-118 422.5
Csa03g04090 . 385 679 Trihelix Transcription Factor Family AT1G70460 51.5 1.1e-83 308.1
Csa01g02911 . 341 623 Trihelix Transcription Factor Family AT1G70460 50.5 1.3e-79 294.7
Csa01g02931 . 633 923 Trihelix Transcription Factor Family AT1G70460 51.2 5.3e-78 289.3
Csa04g00130 . 352 644 Trihelix Transcription Factor Family AT1G70460 52.4 1.5e-77 287.7
Csa03g02648 . 359 643 Trihelix Transcription Factor Family AT1G70460 52.1 1.0e-76 285.0
Csa07g02390 . 491 777 Trihelix Transcription Factor Family AT1G70460 50.7 1.9e-75 280.8
Csa06g00019 . 151 427 Trihelix Transcription Factor Family AT1G70460 51.6 2.3e-73 273.9
Csa06g00402 . 37 487 Trihelix Transcription Factor Family AT1G76890 50.7 1.1e-81 301.2
Csa06g00073 . 32 425 Trihelix Transcription Factor Family AT2G15880 63.7 4.5e-64 243.0
Csa06g00076 . 26 400 Trihelix Transcription Factor Family AT2G15880 67.4 1.7e-63 241.1
Csa06g00075 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa06g00077 . 26 225 Trihelix Transcription Factor Family AT2G15880 63.5 4.1e-49 193.4
Csa01g02065 CCT 25 396 Trihelix Transcription Factor Family AT2G15880 68.6 1.4e-41 168.3
Csa02g00136 CCT 47 423 Trihelix Transcription Factor Family AT2G15880 64.8 2.0e-40 164.5
Csa03g03386 . 96 362 Trihelix Transcription Factor Family AT5G03680 59.5 1.3e-77 287.7
       

Syn-Orthogroups


Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011381 0 1 1 1 1 0 1 0 0 1 1 0 1 1 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 1 14
       

Regulatory proteins


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78001 PF00069 Pkinase 3.10E-44 CL0016 Csa PK