Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02084 ATGAAAAGAAAAAGAAATTCTCACTTTGGAGGCAAGGAATCGTTTGCGTACATTTTCCAACGGCATCTATTCGTCATCTGTTCTCTCAGAGGAACACAAACCTCATCTCCAACTCAAAATCCCCCCTTCTTTCTATCACACGATCACTTGAATTTCACTCCATTGGTGACGCTAATGTCGGGCTCCAGAATCCAACCAGCAGCTTCTGTTCTTTCCTCTTCCATCAAGCGCCATATGGGTTTTAGTTTCTACCTTCCTTCCAATTCCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCCTTCAGGCGCTCTGGACCTGCACGATCTCTCTCTGTTTCCATGTCTGTTGCCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACTCTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAGAGGGTATTACTCACTTTGGAGGAAAAGCATCTACCCTATGACTTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGAAGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGATTGCAGATTCAGATGTTATAACAGAAACACTAGAAGAGAAGTACCCAAATCCACCTTTAGTAACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTTTCCACATTTATTGCTTTTCTAAAGAGCAAGGATCCTAATGATGGAACAGAACAAGCATTGCTTAGTGAGCTAACTTCTTTCAATGATCACATCAAAGAGAATGGCCCTTTGATCAATGGGAAAGAGATTTCTGCTGCAGATCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTATAAGAACTGGTCTGTTCCAGACAGTCTACCCTACGTTAAGTCGTACATGAAGAGCATATTTTCAAGAGAATCTTTTGCAAAAACTCGTGCGTTGCCGGAGGATGTTATTGCTGGTTGGCGTCCAAAGGTATTAGGTTAA 987 42.35 MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLEACVKASTTLPNKLGDCPFCQRVLLTLEEKHLPYDLKLVDLSNKPEWFLKINSEGKVPVVKFDEQWIADSDVITETLEEKYPNPPLVTPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELTSFNDHIKENGPLINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFAKTRALPEDVIAGWRPKVLG* 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17117911 17130463 - CsaV3_3G020840.1 Csa03g02084 522989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02084 328 SFLD Main (cytGST) 135 302 - -
Csa03g02084 328 SUPERFAMILY Thioredoxin-like 134 203 IPR036249 -
Csa03g02084 328 Gene3D - 206 327 - -
Csa03g02084 328 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 126 204 IPR004045 -
Csa03g02084 328 CDD GST_C_DHAR 205 325 - -
Csa03g02084 328 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 59 327 - -
Csa03g02084 328 SUPERFAMILY GST C-terminal domain-like 199 325 IPR036282 -
Csa03g02084 328 Pfam Glutathione S-transferase, N-terminal domain 135 204 IPR004045 -
Csa03g02084 328 Gene3D Glutaredoxin 117 205 - -
Csa03g02084 328 SFLD Glutathione Transferase (cytosolic) 135 302 IPR040079 -
Csa03g02084 328 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 59 327 IPR044627 GO:0033355|GO:0045174|GO:0098869
Csa03g02084 328 CDD GST_N_family 136 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02084 Csa-Chr3:17117911 Csa05g00668 Csa-Chr5:4484418 5.15E-96 dispersed
Csa03g02084 Csa-Chr3:17117911 Csa03g03227 Csa-Chr3:29660892 4.26E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02084 K21888 - csv:101203335 639.802