Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g02084 | ATGAAAAGAAAAAGAAATTCTCACTTTGGAGGCAAGGAATCGTTTGCGTACATTTTCCAACGGCATCTATTCGTCATCTGTTCTCTCAGAGGAACACAAACCTCATCTCCAACTCAAAATCCCCCCTTCTTTCTATCACACGATCACTTGAATTTCACTCCATTGGTGACGCTAATGTCGGGCTCCAGAATCCAACCAGCAGCTTCTGTTCTTTCCTCTTCCATCAAGCGCCATATGGGTTTTAGTTTCTACCTTCCTTCCAATTCCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCCTTCAGGCGCTCTGGACCTGCACGATCTCTCTCTGTTTCCATGTCTGTTGCCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACTCTACCCAACAAGCTCGGCGACTGCCCTTTTTGTCAGAGGGTATTACTCACTTTGGAGGAAAAGCATCTACCCTATGACTTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAAAAATAAATTCAGAAGGCAAAGTTCCCGTTGTTAAATTTGATGAGCAGTGGATTGCAGATTCAGATGTTATAACAGAAACACTAGAAGAGAAGTACCCAAATCCACCTTTAGTAACCCCTCCTGACAAATCTTCAGTAGGATCAAAGATTTTTTCCACATTTATTGCTTTTCTAAAGAGCAAGGATCCTAATGATGGAACAGAACAAGCATTGCTTAGTGAGCTAACTTCTTTCAATGATCACATCAAAGAGAATGGCCCTTTGATCAATGGGAAAGAGATTTCTGCTGCAGATCTGTCACTTGGTCCAAAGTTGTACCATCTAGAAATTGCATTGGGTCACTATAAGAACTGGTCTGTTCCAGACAGTCTACCCTACGTTAAGTCGTACATGAAGAGCATATTTTCAAGAGAATCTTTTGCAAAAACTCGTGCGTTGCCGGAGGATGTTATTGCTGGTTGGCGTCCAAAGGTATTAGGTTAA | 987 | 42.35 | MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLEACVKASTTLPNKLGDCPFCQRVLLTLEEKHLPYDLKLVDLSNKPEWFLKINSEGKVPVVKFDEQWIADSDVITETLEEKYPNPPLVTPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELTSFNDHIKENGPLINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKSIFSRESFAKTRALPEDVIAGWRPKVLG* | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 17117911 | 17130463 | - | CsaV3_3G020840.1 | Csa03g02084 | 522989 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g02084 | 328 | SFLD | Main (cytGST) | 135 | 302 | - | - | |
Csa03g02084 | 328 | SUPERFAMILY | Thioredoxin-like | 134 | 203 | IPR036249 | - | |
Csa03g02084 | 328 | Gene3D | - | 206 | 327 | - | - | |
Csa03g02084 | 328 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 126 | 204 | IPR004045 | - | |
Csa03g02084 | 328 | CDD | GST_C_DHAR | 205 | 325 | - | - | |
Csa03g02084 | 328 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC | 59 | 327 | - | - | |
Csa03g02084 | 328 | SUPERFAMILY | GST C-terminal domain-like | 199 | 325 | IPR036282 | - | |
Csa03g02084 | 328 | Pfam | Glutathione S-transferase, N-terminal domain | 135 | 204 | IPR004045 | - | |
Csa03g02084 | 328 | Gene3D | Glutaredoxin | 117 | 205 | - | - | |
Csa03g02084 | 328 | SFLD | Glutathione Transferase (cytosolic) | 135 | 302 | IPR040079 | - | |
Csa03g02084 | 328 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 59 | 327 | IPR044627 | GO:0033355|GO:0045174|GO:0098869 | |
Csa03g02084 | 328 | CDD | GST_N_family | 136 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g02084 | Csa-Chr3:17117911 | Csa05g00668 | Csa-Chr5:4484418 | 5.15E-96 | dispersed | |
Csa03g02084 | Csa-Chr3:17117911 | Csa03g03227 | Csa-Chr3:29660892 | 4.26E-08 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g02084 | K21888 | - | csv:101203335 | 639.802 |