Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02186 ATGATCTTATCAAAAATCTTCCTCTCTCTTCATAAAGCTCCCTCATACAAAGCTGAGCCTGTATTTTCAACACAACCTGAAGGAGATTTCCTATGGAGAATAGTCCTGATGCTTGGTGCTTTACCAGCCATTTTAACTTACTATTGGAGAATGAAAATGCCTGAAACAGGACGTTACACTGCCCTAATTGAAGGTAATGCCAAACAAGCGGCTGCAGATATGGGAAAAGTTTTAGAAATTCAAATTCAAGCTGAGCAAGAAAAACTTGCCAATTTCAAATCAGCCAATGAATATGGTTTGTTATCTAAAGAGTTTTTTGATCGCCATGGACTTCATTTGATTGGAACTACCACTACTTGGTTCTTGTTGGACATTGCATTTTATAGCAATAATCTTACTCAAAAAGATATATTCCCAGCTATGAATTTGACTAAGAAACCTGAGACAGTTAGTGCGTTGGAAGAGGTTTATGAAACTTCTAAAGCTATGTTTCTTGTTGCTTTACTTGGAACTTTCCCTGGCTATTGGTTCACTGTGTTTCTCATTGAGAAGCTTGGAAGGTTCAAAATCCAATTGATTGGTTTCTTTATGATGTCGGTTTTCATGGCCGTCCTCGGTGTTCGTTACAACTATATGAAGAATCACCCTGTCGAGTTTGCCATTATTTATGGCTTGACGTTTTTCTTTGCCAACTTTGGTCCTAATAGTACTACCTTTGTCCTTCCTGCTGAGCTTTTCCCAACTAGGGTTCGGTCGACGTGTCATGCTTTAAGTGCCGCATCGGGGAAGGCTGGTGCAATCGTTGGAGCATTCGGGGTGCAAAACTATACCCTAGATGGAAACCCTAGCAAGATTCAAAAGGCTATGATTTTCTTGGCCTTTACTAATATGCTAGGGTTTGTGTTCACGTTCTTGGTGACGGAAACAAAAGGGCGATCGTTGGAGGAGATCTCCGGTGAAGATGGGGGCAGCGCGGGCGAAAATGAAACTCAAATGCCTGTGAGATCAATGGGGAAAGAAAAATCAAAGTTACAAGTTAGAAGAACAACTACCAAGTCAGTTCTAGGAACCGATACCTGTAACTTGGAATTCCGCAAGCAGCATGTGTATGCATTCAATAAAGTGGAATGTAATTTCATCAAAAAATTAAAATCGATCCCAATATCCAACACATTCCATATTAGAATACCTGTCACAACTTCGACGTTGCCACCGTGGAATCTTCTTCTCGACATTGCCACCAGAACCGAAACTCCAATCCTCTCAATTCCTAGTGAGAACTTCACTCTCACTGACAAATTAATAATCCCCTAA 1314 40.56 MILSKIFLSLHKAPSYKAEPVFSTQPEGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEIQIQAEQEKLANFKSANEYGLLSKEFFDRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKKPETVSALEEVYETSKAMFLVALLGTFPGYWFTVFLIEKLGRFKIQLIGFFMMSVFMAVLGVRYNYMKNHPVEFAIIYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGGSAGENETQMPVRSMGKEKSKLQVRRTTTKSVLGTDTCNLEFRKQHVYAFNKVECNFIKKLKSIPISNTFHIRIPVTTSTLPPWNLLLDIATRTETPILSIPSENFTLTDKLIIP* 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19003078 19009390 - CsaV3_3G021860.1 Csa03g02186 523091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02186 437 MobiDBLite consensus disorder prediction 315 343 - -
Csa03g02186 437 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 1 328 - -
Csa03g02186 437 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 328 - -
Csa03g02186 437 Gene3D MFS general substrate transporter like domains 1 335 IPR036259 -
Csa03g02186 437 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 311 IPR020846 GO:0022857
Csa03g02186 437 Pfam Sugar (and other) transporter 31 318 IPR005828 GO:0016021|GO:0022857|GO:0055085
Csa03g02186 437 SUPERFAMILY MFS general substrate transporter 32 318 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02186 Csa-Chr3:19003078 Csa06g00361 Csa-Chr6:2938148 1.28E-126 dispersed
Csa03g02186 Csa-Chr3:19003078 Csa03g01213 Csa-Chr3:9360966 2.73E-132 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02186 K08176 - csv:101210631 645.195