Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02187 ATGGCAATCGCCGTGCTCGATGCCCTTGACAATGCTCGAACACAATGGTACCATATTACGGCCATAGTCATAGCCGGGATGGGCTTTTTCACAGATGCCTACGATCTTTTCTGCATTTCAACGGTGTCCAAGCTTCTCGGTCGACTTTATTACTTCAATCCAGATAGTACTAAGCCGGGAAAACTTCCAAACCAAATCAACAACGCGGTTGTGGGAGTTGCGTTGGTCGGAACCCTAATGGGACAACTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTATGGTGTTACCCTAGTCCTTATGGCTCTTTGTGCCATTTGTTCAGGGCTTTCTTTTGGGTCAACATCAAAGTCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGGGGTGACTATCCACTTTCAGCCACCATCATGTCTGAATATGCTAACAAAAAGACTCGAGGGGCTTTCATTGCAGCTGTCTTTGCTATGCAGGTTCAATTTTTTTACGATTTTACTAAAATAAAGTTGAAAGTTGGTGAATATATGAAAAACAACATCAAAATTATAGACAACTTTTTAGATTTCGTGTGGCAATTGCAATAA 618 41.42 MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFNPDSTKPGKLPNQINNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLVLMALCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQVQFFYDFTKIKLKVGEYMKNNIKIIDNFLDFVWQLQ* 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 19010288 19010905 - CsaV3_3G021870.1 Csa03g02187 523092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02187 205 Gene3D MFS general substrate transporter like domains 17 205 IPR036259 -
Csa03g02187 205 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 205 IPR020846 GO:0022857
Csa03g02187 205 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 169 - -
Csa03g02187 205 Pfam Sugar (and other) transporter 22 163 IPR005828 GO:0016021|GO:0022857|GO:0055085
Csa03g02187 205 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 3 169 - -
Csa03g02187 205 SUPERFAMILY MFS general substrate transporter 9 168 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02187 Csa-Chr3:19010288 Csa06g00361 Csa-Chr6:2938148 3.57E-80 dispersed
Csa03g02187 Csa-Chr3:19010288 Csa02g01063 Csa-Chr2:10325177 2.10E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02187 K08176 - csv:101210631 343.584