Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g02187 | ATGGCAATCGCCGTGCTCGATGCCCTTGACAATGCTCGAACACAATGGTACCATATTACGGCCATAGTCATAGCCGGGATGGGCTTTTTCACAGATGCCTACGATCTTTTCTGCATTTCAACGGTGTCCAAGCTTCTCGGTCGACTTTATTACTTCAATCCAGATAGTACTAAGCCGGGAAAACTTCCAAACCAAATCAACAACGCGGTTGTGGGAGTTGCGTTGGTCGGAACCCTAATGGGACAACTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTATGGTGTTACCCTAGTCCTTATGGCTCTTTGTGCCATTTGTTCAGGGCTTTCTTTTGGGTCAACATCAAAGTCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGGGGTGACTATCCACTTTCAGCCACCATCATGTCTGAATATGCTAACAAAAAGACTCGAGGGGCTTTCATTGCAGCTGTCTTTGCTATGCAGGTTCAATTTTTTTACGATTTTACTAAAATAAAGTTGAAAGTTGGTGAATATATGAAAAACAACATCAAAATTATAGACAACTTTTTAGATTTCGTGTGGCAATTGCAATAA | 618 | 41.42 | MAIAVLDALDNARTQWYHITAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFNPDSTKPGKLPNQINNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLVLMALCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQVQFFYDFTKIKLKVGEYMKNNIKIIDNFLDFVWQLQ* | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 19010288 | 19010905 | - | CsaV3_3G021870.1 | Csa03g02187 | 523092 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g02187 | 205 | Gene3D | MFS general substrate transporter like domains | 17 | 205 | IPR036259 | - | |
Csa03g02187 | 205 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 21 | 205 | IPR020846 | GO:0022857 | |
Csa03g02187 | 205 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 3 | 169 | - | - | |
Csa03g02187 | 205 | Pfam | Sugar (and other) transporter | 22 | 163 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Csa03g02187 | 205 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-11 | 3 | 169 | - | - | |
Csa03g02187 | 205 | SUPERFAMILY | MFS general substrate transporter | 9 | 168 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g02187 | Csa-Chr3:19010288 | Csa06g00361 | Csa-Chr6:2938148 | 3.57E-80 | dispersed | |
Csa03g02187 | Csa-Chr3:19010288 | Csa02g01063 | Csa-Chr2:10325177 | 2.10E-91 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g02187 | K08176 | - | csv:101210631 | 343.584 |