Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02498 ATGGGTATCATCATCTCCCTCTTCTCCATCTCTATTTTCTTTGTTTTCCTCTTCAGATTCCGGCCACCCCCCGCCGACTTTTCTTCCCCGCCGACGTACCCTCTAATCGGTTGTCTCATCTCCTTCTACATTAACCGCAATCGCCTGTTGGATTGGTACACTGAGCTCTTGTCGAAATCCCCCACCGGCACTATCGTCATCCGCCGCCTCGGCTGTCGACGCACGGTGGTGACCGTGAACCCAGTTAACGTAGAGTACATTTTGACGACCCATTTCCATAATTTCCCTAAAGGCAAGCCTTTCACTGAGATCTTGAATGACTTTCTTGGCTGCGGCATTTTCAACGTCGACGGTGACCAATGGCGGACACAGCGTAAGCTGGCTAGCCATGAATTTAGTGCCAAGTCGCTTCAGGAATTTGTTGTGGAGACGTTGAAGTCAGAAGTTGAGATGCGGTTGTTGCCAGCCCTCGAGGCTTCGGCCCACGACGCTAAAGTCGTGGACTTCCAGGATTTACTAAGAGGATTTGCATTCCGAGTAATTTGTAAGATTGTTTTGGGGAGTGAAGAAGAGACAATCTTTGCGCTTCAAAAGAGCTTCGACGTGGCGTCGGAAGTGTGCGCGAGGCGAGCAATGGAGCCAGTTTACGTGATGTGGAAAATGAAGAGATGGTTTGGGGTTGGATCGGAGCAGCGGTTGAAGATGGAGGTGGCGGAGGTTCATCGGAAAGTGATGAACATAATTGACAAAAGAAGAAAGAAGGAGAAGATCCAGGATATCCATGGCACCCAAGATCTTCTGTCCAGGTTGATCAAAACCGGGCACGACGATGAGGTGATCCGAGACATGGTGATAAGCTTCATCATGGCAGGTCGAGACACAACTTCTGCTGCAATGACATGGTTGTTTTGGCTACTCTGCATTCATCCTAACATAGAAAATCAATTAATAGAAGAGATAGACTTGACGTCAGTAAAATTGGACTACCAATCTCTGAAGGAGCTCAAATATCTCAAGGCATGCCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGACTCAAAGCATGCCGTTGCCGATGACTACTTGCCAGACGGTACTCTCGTCCGATCAGGAGATAGAGTGACATATTTCCCGTACGGGATGGGTAGAATGGTGGCCTTGTGGGGGAAGGACCAGTTCGAGTTCAAGCCGAGCCGATGGGTTGTGGAACAAGACGGGCGTGGGGGGCGGAGAAGAGGGGTGAAATTGGTGAGTCCATACAAGTTTCCCATATTTCAAGCTGGGCCAAGGGTGTGTTTGGGGAAGGAGATGGCCTTCCTTCAGATGAAGTATGTGGTGGCTTCTATTCTTAGCCAATTCAGAATCAAACCTGTTGCCGGCGACCACCCTGTGTTTGTGCCGCTGTTGACGGCGCACATGGCCGGCGGCTTCAAGGTTTTTATTCAAAGGAGAGAGAGAGAGAGAGAGAGAGAGGCAATTCAAGACAAACAAACAAAATCCACAATATAA 1518 49.28 MGIIISLFSISIFFVFLFRFRPPPADFSSPPTYPLIGCLISFYINRNRLLDWYTELLSKSPTGTIVIRRLGCRRTVVTVNPVNVEYILTTHFHNFPKGKPFTEILNDFLGCGIFNVDGDQWRTQRKLASHEFSAKSLQEFVVETLKSEVEMRLLPALEASAHDAKVVDFQDLLRGFAFRVICKIVLGSEEETIFALQKSFDVASEVCARRAMEPVYVMWKMKRWFGVGSEQRLKMEVAEVHRKVMNIIDKRRKKEKIQDIHGTQDLLSRLIKTGHDDEVIRDMVISFIMAGRDTTSAAMTWLFWLLCIHPNIENQLIEEIDLTSVKLDYQSLKELKYLKACLCETMRMYPPVPWDSKHAVADDYLPDGTLVRSGDRVTYFPYGMGRMVALWGKDQFEFKPSRWVVEQDGRGGRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYVVASILSQFRIKPVAGDHPVFVPLLTAHMAGGFKVFIQRREREREREAIQDKQTKSTI* 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23451939 23457068 + CsaV3_3G027050.1 Csa03g02498 523403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02498 505 Gene3D Cytochrome P450 23 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 Pfam Cytochrome P450 29 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 SUPERFAMILY Cytochrome P450 19 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa03g02498 505 PANTHER CYTOCHROME P450 25 486 - -
Csa03g02498 505 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 25 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02498 Csa-Chr3:23451939 Csa07g01066 Csa-Chr7:10198721 2.38E-143 dispersed
Csa01g00063 Csa-Chr1:362093 Csa03g02498 Csa-Chr3:23451939 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02498 K20665 - csv:101207598 974.156