Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g02498 | ATGGGTATCATCATCTCCCTCTTCTCCATCTCTATTTTCTTTGTTTTCCTCTTCAGATTCCGGCCACCCCCCGCCGACTTTTCTTCCCCGCCGACGTACCCTCTAATCGGTTGTCTCATCTCCTTCTACATTAACCGCAATCGCCTGTTGGATTGGTACACTGAGCTCTTGTCGAAATCCCCCACCGGCACTATCGTCATCCGCCGCCTCGGCTGTCGACGCACGGTGGTGACCGTGAACCCAGTTAACGTAGAGTACATTTTGACGACCCATTTCCATAATTTCCCTAAAGGCAAGCCTTTCACTGAGATCTTGAATGACTTTCTTGGCTGCGGCATTTTCAACGTCGACGGTGACCAATGGCGGACACAGCGTAAGCTGGCTAGCCATGAATTTAGTGCCAAGTCGCTTCAGGAATTTGTTGTGGAGACGTTGAAGTCAGAAGTTGAGATGCGGTTGTTGCCAGCCCTCGAGGCTTCGGCCCACGACGCTAAAGTCGTGGACTTCCAGGATTTACTAAGAGGATTTGCATTCCGAGTAATTTGTAAGATTGTTTTGGGGAGTGAAGAAGAGACAATCTTTGCGCTTCAAAAGAGCTTCGACGTGGCGTCGGAAGTGTGCGCGAGGCGAGCAATGGAGCCAGTTTACGTGATGTGGAAAATGAAGAGATGGTTTGGGGTTGGATCGGAGCAGCGGTTGAAGATGGAGGTGGCGGAGGTTCATCGGAAAGTGATGAACATAATTGACAAAAGAAGAAAGAAGGAGAAGATCCAGGATATCCATGGCACCCAAGATCTTCTGTCCAGGTTGATCAAAACCGGGCACGACGATGAGGTGATCCGAGACATGGTGATAAGCTTCATCATGGCAGGTCGAGACACAACTTCTGCTGCAATGACATGGTTGTTTTGGCTACTCTGCATTCATCCTAACATAGAAAATCAATTAATAGAAGAGATAGACTTGACGTCAGTAAAATTGGACTACCAATCTCTGAAGGAGCTCAAATATCTCAAGGCATGCCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGACTCAAAGCATGCCGTTGCCGATGACTACTTGCCAGACGGTACTCTCGTCCGATCAGGAGATAGAGTGACATATTTCCCGTACGGGATGGGTAGAATGGTGGCCTTGTGGGGGAAGGACCAGTTCGAGTTCAAGCCGAGCCGATGGGTTGTGGAACAAGACGGGCGTGGGGGGCGGAGAAGAGGGGTGAAATTGGTGAGTCCATACAAGTTTCCCATATTTCAAGCTGGGCCAAGGGTGTGTTTGGGGAAGGAGATGGCCTTCCTTCAGATGAAGTATGTGGTGGCTTCTATTCTTAGCCAATTCAGAATCAAACCTGTTGCCGGCGACCACCCTGTGTTTGTGCCGCTGTTGACGGCGCACATGGCCGGCGGCTTCAAGGTTTTTATTCAAAGGAGAGAGAGAGAGAGAGAGAGAGAGGCAATTCAAGACAAACAAACAAAATCCACAATATAA | 1518 | 49.28 | MGIIISLFSISIFFVFLFRFRPPPADFSSPPTYPLIGCLISFYINRNRLLDWYTELLSKSPTGTIVIRRLGCRRTVVTVNPVNVEYILTTHFHNFPKGKPFTEILNDFLGCGIFNVDGDQWRTQRKLASHEFSAKSLQEFVVETLKSEVEMRLLPALEASAHDAKVVDFQDLLRGFAFRVICKIVLGSEEETIFALQKSFDVASEVCARRAMEPVYVMWKMKRWFGVGSEQRLKMEVAEVHRKVMNIIDKRRKKEKIQDIHGTQDLLSRLIKTGHDDEVIRDMVISFIMAGRDTTSAAMTWLFWLLCIHPNIENQLIEEIDLTSVKLDYQSLKELKYLKACLCETMRMYPPVPWDSKHAVADDYLPDGTLVRSGDRVTYFPYGMGRMVALWGKDQFEFKPSRWVVEQDGRGGRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYVVASILSQFRIKPVAGDHPVFVPLLTAHMAGGFKVFIQRREREREREAIQDKQTKSTI* | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 23451939 | 23457068 | + | CsaV3_3G027050.1 | Csa03g02498 | 523403 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g02498 | 505 | Gene3D | Cytochrome P450 | 23 | 490 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | E-class P450 group I signature | 59 | 78 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | E-class P450 group I signature | 279 | 296 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | E-class P450 group I signature | 299 | 325 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | E-class P450 group I signature | 425 | 435 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | E-class P450 group I signature | 435 | 458 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | Pfam | Cytochrome P450 | 29 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | SUPERFAMILY | Cytochrome P450 | 19 | 487 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | P450 superfamily signature | 290 | 307 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | P450 superfamily signature | 340 | 351 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | P450 superfamily signature | 426 | 435 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PRINTS | P450 superfamily signature | 435 | 446 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa03g02498 | 505 | PANTHER | CYTOCHROME P450 | 25 | 486 | - | - | |
Csa03g02498 | 505 | PANTHER | CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 | 25 | 486 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g02498 | Csa-Chr3:23451939 | Csa07g01066 | Csa-Chr7:10198721 | 2.38E-143 | dispersed | |
Csa01g00063 | Csa-Chr1:362093 | Csa03g02498 | Csa-Chr3:23451939 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g02498 | K20665 | - | csv:101207598 | 974.156 |