Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02527 ATGCCAAGCGTGGCTGTCAAGCTTTACAGCGTCTTCTTCAAGTTCCTCTTGAAGCATCGTTTGCAGAATCTGATCCAAGCTCCACTTGACGAATCCAGCCCTTTTGGCGTCACATCTCGTCCTGAAGAAACCGTTGCTTCTGCTAATCCTTTGTTCACCGACGGCGTCGCTACCAAAGATATCCACATCGATCCCTTTACATCTCTTAGCATTCGGATCTTCCTCCCTGAATCTGCTCTTACTCCTCCTGAATCTGACTCCAAACCCTCTTCCAAATCCTCCAAGCCTAAACCTAAACGCTCCAATCAAGATGCTCAACCCGATCTTGTTCATCATAATCGTAATAATTTACAGCAGTATCCTTCTCGTCGGAATAGCTATGGTCCTTCGGGAAATACCAGGGATGAACTGCGGGTGAGTAGAATTGGTGGTTACAGTAATGAAATGGAGGGGTTGAATTTGATTCCGGGTCCTGCCCCCGGTGGCGTTTACAGAGGGTACGCCCCGGTCACGGAGAATAGTCGGAGATTGCCGGTGATGTTGCAATTTCATGGTGGGGGGTGGGTTAGTGGGAGCAATGATTCCGCGGCTAATGATTTCTTTTGTCGGAGGATTGCAAAATTGTGCGATGTTATTGTTGTTGCTGTCGGGTATCGGCTTGCACCCGAGAATCGATTTCCGGCTGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGGAAGCAGGCCAATTTGGCCGAGTGCAGCAAGTCTATGGGAAATACAAAAGGCAATAGCAATGAGTTTAAGAAATCGGATAATCATAGGCATATTGTTGACACATTTGGGGCCTCAATGGTGGAGCCTTGGTTGGCAGCCCATGGAGACCCAACAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTAGCGGATTATGTGGCTCGAAAGGCTGTGGAGGCTGGTAAGCTCTTGGATCCTGTCAAGGTAGTTGCCCAGGTTCTCCTATATCCGTTTTTTGTTGGTAGTGCCCCCACTCATTCAGAGTTGAAGCTGGCAAATTCGTATTTTTACGACAAAGCTATGTGCCTTCTTGCTTGGAAACTTTTCCTACCCGAGGAAAACTTTAGTCTTGATCATCCAGCTGCAAATCCCCTTGTTTCCGGTAGAGAAGGCCCACCTCTAAAGCTCATGCCACCAACACTGACAGTTGTGGCGGAACTTGACTGGATGAGAGACCGAGCCATAGCTTATTCTGAAGAACTTCGAAAGGTAAATGTCGATGCACCTGTTCTCGACTACAAGGATGCAGTGCACGAATTCGCAACCCTCGATATTCTTCTCAAGACACCTCAAGCTCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCACGAGTTCTCCTATTGA 1419 47.71 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPESDSKPSSKSSKPKPKRSNQDAQPDLVHHNRNNLQQYPSRRNSYGPSGNTRDELRVSRIGGYSNEMEGLNLIPGPAPGGVYRGYAPVTENSRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGNSNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSAPTHSELKLANSYFYDKAMCLLAWKLFLPEENFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY* 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23667869 23671949 + CsaV3_3G027340.1 Csa03g02527 523432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02527 472 Gene3D alpha/beta hydrolase 19 461 IPR029058 -
Csa03g02527 472 MobiDBLite consensus disorder prediction 90 107 - -
Csa03g02527 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787
Csa03g02527 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Csa03g02527 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787
Csa03g02527 472 MobiDBLite consensus disorder prediction 108 133 - -
Csa03g02527 472 MobiDBLite consensus disorder prediction 79 137 - -
Csa03g02527 472 PANTHER CARBOXYLESTERASE 16-RELATED 20 452 - -
Csa03g02527 472 PANTHER ARYLACETAMIDE DEACETYLASE 20 452 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02527 Csa-Chr3:23667869 Csa02g02510 Csa-Chr2:22110998 7.23E-38 dispersed
Csa03g02527 Csa-Chr3:23667869 Csa06g00604 Csa-Chr6:5127498 5.48E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02527 - - csv:101219102 934.095