Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02562 ATGTTCGTGACTAAAACCGTAATCCTAATTGACCCGGTGAAATACAAGAACATTTCATCTGGTTTTGGAGTTTTGCTAAAGGAGCAAGGAATCAGGGGCCTCTTTAGGGGTTGGGCGCCAACTCTACTTGGTTACAGTGCTCAAGGTGCTTGCAAGTATGGCATCTACGAATTCTTTAAGAAATACTATTCCGATATAGTGGGTCCTGAGTATGCAGCAAAGTACAAGACATTGATCTATCTTGCTGGTTCTGCGTCCGCTGAAGTGATTGCTGATGTTGCACTTTGCCCCTTTGAAGCTGTTAAAGTTAGAGTTCAGACACAGCCAGGTTTTGGCAGAGGTTTGTCAGATGGCCTTCCTAAATTTGTTAGATCTGAAGGTGCTCTTGGGTTGTACAAGGGTATTGTTCCTCTGTGGGGACGTCAAATCCCATATACAATGATGAAGTTTGCAACATTTGAGAACTTGGTGGAACTTATCTACAAGCATGCAATCACGAAGCCAAAGAATGAATGCAGCAGCGCATTGCAGCTTGGAGTCAGCTTTGCTGGTGGATATATTGCGGGTGTGTCTTGTGCTATAGTTTCTCATCCTGCGGATAATCTCGTCTCCTTTCTCAATAATGCTAAAGGGGCTACCGTTGGCGAGGCAATTCAGAAACTTGGATTATGGGGTCTCTTCACACGAGGGCTGCCTCTACGCATAGTCATGATTGGTACCCTAACTGGAGCTCAATGGGTTATCTACGACGCCTTCAAAGTTTCTGTTGGACTGCCAACAACGGGTGGGGTTGCTCCTCCCATTGCTGCATCCCCAGAACATACAACTGCAACTGCGTAG 840 45.83 MFVTKTVILIDPVKYKNISSGFGVLLKEQGIRGLFRGWAPTLLGYSAQGACKYGIYEFFKKYYSDIVGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFGRGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFATFENLVELIYKHAITKPKNECSSALQLGVSFAGGYIAGVSCAIVSHPADNLVSFLNNAKGATVGEAIQKLGLWGLFTRGLPLRIVMIGTLTGAQWVIYDAFKVSVGLPTTGGVAPPIAASPEHTTATA* 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 23997850 24000739 - CsaV3_3G027690.1 Csa03g02562 523467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02562 279 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 271 IPR044677 GO:0005315|GO:1990547
Csa03g02562 279 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 271 - -
Csa03g02562 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 62 IPR018108 -
Csa03g02562 279 Gene3D Mitochondrial carrier domain 3 257 IPR023395 -
Csa03g02562 279 SUPERFAMILY Mitochondrial carrier 4 251 IPR023395 -
Csa03g02562 279 Pfam Mitochondrial carrier protein 11 64 IPR018108 -
Csa03g02562 279 Pfam Mitochondrial carrier protein 79 163 IPR018108 -
Csa03g02562 279 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02562 Csa-Chr3:23997850 Csa05g01668 Csa-Chr5:19816552 2.25E-168 dispersed
Csa03g02562 Csa-Chr3:23997850 Csa04g01544 Csa-Chr4:14989952 1.24E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02562 K15102 - csv:101203018 545.814