Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02718 ATGTTTAATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTCTGTTTTTTCAATGTAAATCTTCTGAAACTCCTCGTAGATTGCTTCACCAACCATTTTTCCCCCTTGATTCTGTTCCTCCGGCGGAGCCACCGTCCACTCCGACACCCCCGCCCCCCAATCCCAAATACCCATTTTCCACTACCCCACCTACTAATCCTGATGGCTCTCCATTTTTTCCCACTTATCCCGGAACCCCACCTCCTCCGGCACCGGCGAGTTTCGCATCCTTTCCGGCTAATATCTCTTCTTTGATTTTACCTCATTCGTCTCAGTCTGGTTCAAGTTCAAAGAAGGTTGTTCCTTTGGTTATTGCGGGGGTTGTTTCTGCTGTTTTGGTTCTCTGCATTGCTGGGTTTTTGTACAGGCGGAGACGGCGTGCTCGTGGGTCGAGCGATGACAAGACGTACAGATCGGAAAATAGTAGCCGGTTGTGTCCGGTTACGAATGTTGAAGTCGGTAATGGAATACCTAAGTTGAGACATCCCTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGCGAGCGATCGATGAGCGTTCTGTTGGAGGAGCTCGTGTTGCTGATCCTAGACCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGTTAAATTTTGGTCGGTCGAGTGAGAAGCAAAATGGTGGAAATGGAGAGGAGAGATCGATGGGAGATGAGGAGGAAGAAGAATTTTACTCGCCTAAAGGTTCTCTTGGCGCAATTGGCTCGGGATCTCGAAGAGTTCTTGCAACAATGGCGGCTGAAGAGTTGCTTGGTAAATCCAGCGACTCGAGTACCACTTCGTATTCCACATCCAGCGGTTCCGTTTCTCCGGCTAGATCACGTTCTAAGAGTCTCTCTTTATCTCCACCGGCGAGCTTGAGCCCTAGAAGATCTGTTCAAAATGAATCTTCTAATTTCTCTGTTTCTGCTACTGTAGCGACGGAGCAGCATTCGCCACCATTAACGCCGCCCCTTTCTCACGGCGAAGTGGAATCAGACGATGGCGTTAAATCCCATTGCCCATCTCCAATGCGTTTATCGACGGACAAAGTTCCGGAGAAGAATTCCACCGCATCTTCATCCCGGAGATATTCTAATGTTTCTATTCACAGTGTGATGTTCCCAATTTTAACAACCGATAGGGATTTGGTTAATCATGCTGATACGAACAATAGTCACGAAGAATCTCCAAGACAATCCGATAATTCAGATCCAGACGAGCCATTTCCCTTTTCTCCTTGCTTATTTCCTCTTTCAGATGGAGTTTTAGGGCAAATTCAGATTCAATTGCCCACAGTTTCAAACATTCCCGATTCGGATTCTGATGCAAAACTTAAGCAACTTCCTTACTCTTTTACTTCATCTTCACCTACATCATCACCGGAGAGAGTTGTTATGGACTCATCTCCGTCAAGAGCGTCCATTATTTCAGATCAAAACAGGTCTACTCCACTATCACCAGAGAGAATTGTGTTGACTGATTCAGATTCATCAAAGAAAACTTTAGACCATCTTGATGATGTGGAATCTTCTCCTAACATCAACACCACTGATTTGGGTCGTCTACAATTGCCTTCGGGTTCATCCGCGGCTCCTCCACCACCTCCACCGCCTCCGCCTCCGCCTCCACCACCCCCGCCACCCCCGCCACTGGTAGCTCCTCTGCCAGAACGACGGGACATACCTGTTTCTCCTTCAACACCAATGGACCAATCCATTTCAAAGACTCCTCCTCCATTAATGCCTCCATTAAGGCCATTTATAATGGAGAATGTGAATAATGTCTCACCAATTCAGTTGTCATCCTGCAAAAGCAATGGTGAATCGTCTGAAGACACCCCTAAGCCCAAGTTGAAGCCATTACATTGGGACAAAGTAAGGGCTAGTTCTGATCGTGAGATGGTGTGGGACCAACTTAGATCAAGCTCTTTTAAAGTAAATGAGGAAATGATTGAAAGTTTGTTTATTGTGAACACTTCCAACTCAAAGGAGACAACTCCACGCACTGTTCTTCCTCCACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCTCAGAACATTGCAATTGCATTACGGGCGATTAATGTGACCATAGAAGAAGTTTGTGATGCCCTTTTAGAAGGTAATGCAGAAGCACTTGGAGCAGAGCTGCTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAATTAAAGGCATCCAAGGATGTCTCGCCTACAAAATTCGGCCCCGCTGAGAAATTTTTGAAGGCAGTTCTTGATGTTCCTTTTGCGTTTAAAAGGGTGGATGCATTGCTTTACATTGCAAATTTTGAGTCTGAGATTGAGTACCTAAAGAAATCATTCGAAAATCTCGAGACTGCTTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTTTTGGAAGCTGTGCTCAAGACCGGGAATCGCATGAATGTTGGCACCAACCGTGGCGATGCCCATGCCTTCAAACTCGACACACTTTTGAAGCTTGTCGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTGCATTTTGTTGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGTGTTACAAGTCAAATTCCAAACTCCAACCCGATTGATGATGCCAAATGTCGGAAACTCGGCCTGCAAGTTGTTTCAGGTCTCAGCTCGGAGCTCGCCAACGTAAAGAAGGCAGCTTCAATGGATTCCGATGTGCTTAGTGGCGAGGTCATGAAGCTTTCAAGAGGACTCGACAACATCAGAGAGGCTTTACGTCTAAACGAGGCCGGTGGGCCAAACGAAAACACGGTCAAGTTCTCGGATTCAATGAGCAGATTCTTGAAAATGGCAGAAGAGGATATCATCAGAGTCCAAGCCCATGAAAGTGTTGCTTTGTCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATTTTCATGGTTGTGAGAGATTTCCTTACAATTCTTGATGGTGTCTGCAAAGAAGTCGGGATGATAAACGAGCGGACAATTGTAAGTTTGGCGCATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTTCAAGCTCTTCATAGAGTGCAGAAATACCATTCTTCTGATGAAGAAAGTGAACGATCCCCATAA 3240 45.49 MFNSFFFFFFFFFFILFFQCKSSETPRRLLHQPFFPLDSVPPAEPPSTPTPPPPNPKYPFSTTPPTNPDGSPFFPTYPGTPPPPAPASFASFPANISSLILPHSSQSGSSSKKVVPLVIAGVVSAVLVLCIAGFLYRRRRRARGSSDDKTYRSENSSRLCPVTNVEVGNGIPKLRHPSATSSEFLYLGTLVNSRAIDERSVGGARVADPRPLDSPELHPLPPLNFGRSSEKQNGGNGEERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEELLGKSSDSSTTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNESSNFSVSATVATEQHSPPLTPPLSHGEVESDDGVKSHCPSPMRLSTDKVPEKNSTASSSRRYSNVSIHSVMFPILTTDRDLVNHADTNNSHEESPRQSDNSDPDEPFPFSPCLFPLSDGVLGQIQIQLPTVSNIPDSDSDAKLKQLPYSFTSSSPTSSPERVVMDSSPSRASIISDQNRSTPLSPERIVLTDSDSSKKTLDHLDDVESSPNINTTDLGRLQLPSGSSAAPPPPPPPPPPPPPPPPPPPLVAPLPERRDIPVSPSTPMDQSISKTPPPLMPPLRPFIMENVNNVSPIQLSSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIESLFIVNTSNSKETTPRTVLPPPNQEIGVLDPKKSQNIAIALRAINVTIEEVCDALLEGNAEALGAELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAVLDVPFAFKRVDALLYIANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCVTSQIPNSNPIDDAKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVMKLSRGLDNIREALRLNEAGGPNENTVKFSDSMSRFLKMAEEDIIRVQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSLAHKFPVPVNPTLPQAFQALHRVQKYHSSDEESERSP* 1080
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 25959151 25964239 - CsaV3_3G030240.1 Csa03g02718 523623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02718 1079 MobiDBLite consensus disorder prediction 277 384 - -
Csa03g02718 1079 ProSiteProfiles Formin homology-2 (FH2) domain profile. 628 1051 IPR015425 -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 406 422 - -
Csa03g02718 1079 Pfam Formin Homology 2 Domain 630 1025 IPR015425 -
Csa03g02718 1079 PANTHER FORMIN-LIKE PROTEIN 1 5 1077 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 406 434 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 41 77 - -
Csa03g02718 1079 PANTHER FORMIN-RELATED 5 1077 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Csa03g02718 1079 SUPERFAMILY Formin homology 2 domain (FH2 domain) 641 1036 - -
Csa03g02718 1079 Gene3D Formin, FH2 domain 625 1034 IPR042201 -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 470 600 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 548 576 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 199 262 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 513 527 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 528 544 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 470 512 - -
Csa03g02718 1079 SMART it6_source 628 1040 IPR015425 -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 277 341 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 369 384 - -
Csa03g02718 1079 MobiDBLite consensus disorder prediction 618 639 - -
Csa03g02718 1079 Coils Coil 793 820 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02281 Csa-Chr3:20297910 Csa03g02718 Csa-Chr3:25959151 6.58E-120 dispersed
Csa03g02718 Csa-Chr3:25959151 Csa05g00980 Csa-Chr5:8967816 3.89E-17 dispersed
Csa03g02718 Csa-Chr3:25959151 Csa02g01413 Csa-Chr2:13503958 1.26E-175 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02718 - - csv:101211678 1851.64