Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa03g02718 | ATGTTTAATTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTCTGTTTTTTCAATGTAAATCTTCTGAAACTCCTCGTAGATTGCTTCACCAACCATTTTTCCCCCTTGATTCTGTTCCTCCGGCGGAGCCACCGTCCACTCCGACACCCCCGCCCCCCAATCCCAAATACCCATTTTCCACTACCCCACCTACTAATCCTGATGGCTCTCCATTTTTTCCCACTTATCCCGGAACCCCACCTCCTCCGGCACCGGCGAGTTTCGCATCCTTTCCGGCTAATATCTCTTCTTTGATTTTACCTCATTCGTCTCAGTCTGGTTCAAGTTCAAAGAAGGTTGTTCCTTTGGTTATTGCGGGGGTTGTTTCTGCTGTTTTGGTTCTCTGCATTGCTGGGTTTTTGTACAGGCGGAGACGGCGTGCTCGTGGGTCGAGCGATGACAAGACGTACAGATCGGAAAATAGTAGCCGGTTGTGTCCGGTTACGAATGTTGAAGTCGGTAATGGAATACCTAAGTTGAGACATCCCTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGCGAGCGATCGATGAGCGTTCTGTTGGAGGAGCTCGTGTTGCTGATCCTAGACCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGTTAAATTTTGGTCGGTCGAGTGAGAAGCAAAATGGTGGAAATGGAGAGGAGAGATCGATGGGAGATGAGGAGGAAGAAGAATTTTACTCGCCTAAAGGTTCTCTTGGCGCAATTGGCTCGGGATCTCGAAGAGTTCTTGCAACAATGGCGGCTGAAGAGTTGCTTGGTAAATCCAGCGACTCGAGTACCACTTCGTATTCCACATCCAGCGGTTCCGTTTCTCCGGCTAGATCACGTTCTAAGAGTCTCTCTTTATCTCCACCGGCGAGCTTGAGCCCTAGAAGATCTGTTCAAAATGAATCTTCTAATTTCTCTGTTTCTGCTACTGTAGCGACGGAGCAGCATTCGCCACCATTAACGCCGCCCCTTTCTCACGGCGAAGTGGAATCAGACGATGGCGTTAAATCCCATTGCCCATCTCCAATGCGTTTATCGACGGACAAAGTTCCGGAGAAGAATTCCACCGCATCTTCATCCCGGAGATATTCTAATGTTTCTATTCACAGTGTGATGTTCCCAATTTTAACAACCGATAGGGATTTGGTTAATCATGCTGATACGAACAATAGTCACGAAGAATCTCCAAGACAATCCGATAATTCAGATCCAGACGAGCCATTTCCCTTTTCTCCTTGCTTATTTCCTCTTTCAGATGGAGTTTTAGGGCAAATTCAGATTCAATTGCCCACAGTTTCAAACATTCCCGATTCGGATTCTGATGCAAAACTTAAGCAACTTCCTTACTCTTTTACTTCATCTTCACCTACATCATCACCGGAGAGAGTTGTTATGGACTCATCTCCGTCAAGAGCGTCCATTATTTCAGATCAAAACAGGTCTACTCCACTATCACCAGAGAGAATTGTGTTGACTGATTCAGATTCATCAAAGAAAACTTTAGACCATCTTGATGATGTGGAATCTTCTCCTAACATCAACACCACTGATTTGGGTCGTCTACAATTGCCTTCGGGTTCATCCGCGGCTCCTCCACCACCTCCACCGCCTCCGCCTCCGCCTCCACCACCCCCGCCACCCCCGCCACTGGTAGCTCCTCTGCCAGAACGACGGGACATACCTGTTTCTCCTTCAACACCAATGGACCAATCCATTTCAAAGACTCCTCCTCCATTAATGCCTCCATTAAGGCCATTTATAATGGAGAATGTGAATAATGTCTCACCAATTCAGTTGTCATCCTGCAAAAGCAATGGTGAATCGTCTGAAGACACCCCTAAGCCCAAGTTGAAGCCATTACATTGGGACAAAGTAAGGGCTAGTTCTGATCGTGAGATGGTGTGGGACCAACTTAGATCAAGCTCTTTTAAAGTAAATGAGGAAATGATTGAAAGTTTGTTTATTGTGAACACTTCCAACTCAAAGGAGACAACTCCACGCACTGTTCTTCCTCCACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCTCAGAACATTGCAATTGCATTACGGGCGATTAATGTGACCATAGAAGAAGTTTGTGATGCCCTTTTAGAAGGTAATGCAGAAGCACTTGGAGCAGAGCTGCTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAATTAAAGGCATCCAAGGATGTCTCGCCTACAAAATTCGGCCCCGCTGAGAAATTTTTGAAGGCAGTTCTTGATGTTCCTTTTGCGTTTAAAAGGGTGGATGCATTGCTTTACATTGCAAATTTTGAGTCTGAGATTGAGTACCTAAAGAAATCATTCGAAAATCTCGAGACTGCTTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTTTTGGAAGCTGTGCTCAAGACCGGGAATCGCATGAATGTTGGCACCAACCGTGGCGATGCCCATGCCTTCAAACTCGACACACTTTTGAAGCTTGTCGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTGCATTTTGTTGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGTGTTACAAGTCAAATTCCAAACTCCAACCCGATTGATGATGCCAAATGTCGGAAACTCGGCCTGCAAGTTGTTTCAGGTCTCAGCTCGGAGCTCGCCAACGTAAAGAAGGCAGCTTCAATGGATTCCGATGTGCTTAGTGGCGAGGTCATGAAGCTTTCAAGAGGACTCGACAACATCAGAGAGGCTTTACGTCTAAACGAGGCCGGTGGGCCAAACGAAAACACGGTCAAGTTCTCGGATTCAATGAGCAGATTCTTGAAAATGGCAGAAGAGGATATCATCAGAGTCCAAGCCCATGAAAGTGTTGCTTTGTCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATTTTCATGGTTGTGAGAGATTTCCTTACAATTCTTGATGGTGTCTGCAAAGAAGTCGGGATGATAAACGAGCGGACAATTGTAAGTTTGGCGCATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTTCAAGCTCTTCATAGAGTGCAGAAATACCATTCTTCTGATGAAGAAAGTGAACGATCCCCATAA | 3240 | 45.49 | MFNSFFFFFFFFFFILFFQCKSSETPRRLLHQPFFPLDSVPPAEPPSTPTPPPPNPKYPFSTTPPTNPDGSPFFPTYPGTPPPPAPASFASFPANISSLILPHSSQSGSSSKKVVPLVIAGVVSAVLVLCIAGFLYRRRRRARGSSDDKTYRSENSSRLCPVTNVEVGNGIPKLRHPSATSSEFLYLGTLVNSRAIDERSVGGARVADPRPLDSPELHPLPPLNFGRSSEKQNGGNGEERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEELLGKSSDSSTTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNESSNFSVSATVATEQHSPPLTPPLSHGEVESDDGVKSHCPSPMRLSTDKVPEKNSTASSSRRYSNVSIHSVMFPILTTDRDLVNHADTNNSHEESPRQSDNSDPDEPFPFSPCLFPLSDGVLGQIQIQLPTVSNIPDSDSDAKLKQLPYSFTSSSPTSSPERVVMDSSPSRASIISDQNRSTPLSPERIVLTDSDSSKKTLDHLDDVESSPNINTTDLGRLQLPSGSSAAPPPPPPPPPPPPPPPPPPPLVAPLPERRDIPVSPSTPMDQSISKTPPPLMPPLRPFIMENVNNVSPIQLSSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIESLFIVNTSNSKETTPRTVLPPPNQEIGVLDPKKSQNIAIALRAINVTIEEVCDALLEGNAEALGAELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAVLDVPFAFKRVDALLYIANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCVTSQIPNSNPIDDAKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVMKLSRGLDNIREALRLNEAGGPNENTVKFSDSMSRFLKMAEEDIIRVQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSLAHKFPVPVNPTLPQAFQALHRVQKYHSSDEESERSP* | 1080 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 25959151 | 25964239 | - | CsaV3_3G030240.1 | Csa03g02718 | 523623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 277 | 384 | - | - | |
Csa03g02718 | 1079 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 628 | 1051 | IPR015425 | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 406 | 422 | - | - | |
Csa03g02718 | 1079 | Pfam | Formin Homology 2 Domain | 630 | 1025 | IPR015425 | - | |
Csa03g02718 | 1079 | PANTHER | FORMIN-LIKE PROTEIN 1 | 5 | 1077 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 406 | 434 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 41 | 77 | - | - | |
Csa03g02718 | 1079 | PANTHER | FORMIN-RELATED | 5 | 1077 | IPR027643 | GO:0003779|GO:0030036|GO:0045010|GO:0051015 | |
Csa03g02718 | 1079 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 641 | 1036 | - | - | |
Csa03g02718 | 1079 | Gene3D | Formin, FH2 domain | 625 | 1034 | IPR042201 | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 470 | 600 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 548 | 576 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 199 | 262 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 513 | 527 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 528 | 544 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 470 | 512 | - | - | |
Csa03g02718 | 1079 | SMART | it6_source | 628 | 1040 | IPR015425 | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 277 | 341 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 369 | 384 | - | - | |
Csa03g02718 | 1079 | MobiDBLite | consensus disorder prediction | 618 | 639 | - | - | |
Csa03g02718 | 1079 | Coils | Coil | 793 | 820 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g02281 | Csa-Chr3:20297910 | Csa03g02718 | Csa-Chr3:25959151 | 6.58E-120 | dispersed | |
Csa03g02718 | Csa-Chr3:25959151 | Csa05g00980 | Csa-Chr5:8967816 | 3.89E-17 | dispersed | |
Csa03g02718 | Csa-Chr3:25959151 | Csa02g01413 | Csa-Chr2:13503958 | 1.26E-175 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa03g02718 | - | - | csv:101211678 | 1851.64 |