Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02769 ATGGGTATCTTGCGTACATTGACAGGTTTAATGCCTTGGAGGAATCGAAGGGAAACTCAGTCTCAAGTTCTCTGGATAGGCATTGGAGCAGGTTTAGCCTCTGTTGTTTTCTCATCATCTATTTCTGCAGAATCTAGAGAAGGAATTTTACAAAGAACTTTTCTGGGTGGAGAGGGGGATCTAGTCCTGGGGCCACTGTCACCAACACTTACGCCAGAGGGTCTGTGGGGGGAGGCCAAAACATGGAAGCAGAGATTGGAAGTTTGCATTGGTGCAGCCAGGGGACTCCATTATCTTCACACAGGAGCTGAGAGAGGAATAATCCACAGAGATGTGAAGACGACCAACATACTCTTGGATGAAAATTTTGTTGCAAAAATGTCTGATTTTGGTCTTTCAAAAACAGGTCCTTCTTTGGATCACACTCATGTTAGTACTGCAGTTAAGGGCAGCTTCGGCTACCTCGATCTGGAGTACTTCAGGCGCCAGCAGCTGAGTGAAAAATCTGATGTTTATTCTTTTGGTGTGGTATTGTTAGAAGTTGTTTGTGCAAGAGCTGTTACAAACCCAACTTTGCCCAAGGATCAGATAAATCTTGCAGAATGGGCAATGAAATGGCAATGA 624 44.55 MGILRTLTGLMPWRNRRETQSQVLWIGIGAGLASVVFSSSISAESREGILQRTFLGGEGDLVLGPLSPTLTPEGLWGEAKTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSLDHTHVSTAVKGSFGYLDLEYFRRQQLSEKSDVYSFGVVLLEVVCARAVTNPTLPKDQINLAEWAMKWQ* 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26529383 26530324 - CsaV3_3G030750.1 Csa03g02769 523674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02769 207 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa03g02769 207 PANTHER OS07G0166700 PROTEIN 79 207 IPR045272 GO:0004714|GO:0006468
Csa03g02769 207 SMART tyrkin_6 35 203 IPR020635 GO:0004713|GO:0006468
Csa03g02769 207 Gene3D Transferase(Phosphotransferase) domain 1 76 207 - -
Csa03g02769 207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 107 119 IPR008271 GO:0004672|GO:0006468
Csa03g02769 207 Pfam Protein tyrosine and serine/threonine kinase 79 193 IPR001245 GO:0004672|GO:0006468
Csa03g02769 207 PANTHER OSJNBA0058K23.13 PROTEIN 79 207 - -
Csa03g02769 207 SUPERFAMILY Protein kinase-like (PK-like) 80 196 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02769 Csa-Chr3:26529383 Csa06g03855 Csa-Chr6:30576449 1.48E-83 dispersed
Csa03g02769 Csa-Chr3:26529383 Csa06g01709 Csa-Chr6:15028080 1.12E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78013 PF07714 PK_Tyr_Ser-Thr 5.30E-24 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02769 - - csv:101216703 254.603