Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa03g02774 ATGGAGCCTTCTCTTGAACTTTCACAAACTCCTGAGCAGATTATACTACGCTGGGATTCTGCCGCAACGGAGGAGGTCAAAGATAAGATGATTTTTGACTCCGACAGGGAAGAGATCGACCGTTACTTGCAGGCTGTCGATGAAATCCAGAGGTCTATGTCCTCTGCTCCCATTTCTGACGATCACAACAAAGCTGATTCCACTATGCAGATCGCCATGGCTAGGCTTGAAGATGAGTTTCGTCACATTCTCTCCAGTCATACCACTCCGATCGAGGTTGACTCGCTTACTGATCCCAGTCCCTCTTCTCGTTCTATGTCCACTAGTGGTAGTGCTGTGTTCGAGGATGAAAACGACGACGAACCCGACTTACAGGAAGTTCAGCTTGATTTAACAGGTAGTCCAAGTTTTGGGTCCAGTGGTCGATCCAGCTACCGGGCCACTAGTAGTATTCGTGAAATTGATCTCATACCTTCCGATGCGGTTATTGATCTACGAAGTATTGCTGAGAGGATGATATCGGCGGGTTACCAGCGCGAGTGCATCCAAGTTTATGGCAGTGTGCGGAAGTCCACCTTCGATTCCAGCTTCCGGCGGCTCGGAATTGAAAAACTAAGCATTGGAGATATCCAGAGGCTGGATTGGAACGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGCAGCTAAGGTTTCTATTAGGACTTTGTTTTCCAGTGAGAAGAAACTTTGCGAGCAAATTTTTTATGGCATAAGGACCGCCATAGATGATGATTGTTTCATGGAGACTGTAAAAGGTCCTGTAACTCAGTTGTTCAATTTCGCAGAGGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTGACGGAGTTGATACCTGACATTGATGTCATATTCGAATCAAAATCCGCGGAGTATATTCGGATTCAGGCCACGGAGATAGTGTCGCGGCTAGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCAGTGCTACGGGAGCCGTCGCTGCATCCAGTTCCCGGCGGGACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCAAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCTCGATTCCAGATATGGACTTCGGTGAGCTAGAGGGAAAAACGCCATTAGCGCTCCATCTTATATGGAGTATCGTGATTCTACAATTCAATTTGGAGGGGAAGTCCCGGCACTACAGAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAAAAGATAAAAGGATCCCCGGAGTTGCGAGAAATGATCGGAGATGTTTATCTGAAAAGACTTACCGGGAAGTATCGACAGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTACGAAACGAAGGGTTGAATGTGGGGGGGAGCTTATCTTCCGGCCCTGCAAAGAGCCTAATTAGAGATAGATTCAAGACTTTCAACGCCATGTTCGAGGAGGTTCACAGGACACAATCATCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTACGCATATCCATAATTGAGAAGTTGATCCCAGCCTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAGACACCCCGAAAATTACATCAAATACTCGGTTGAGGAACTCGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCTGTAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 47.85 MEPSLELSQTPEQIILRWDSAATEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSAPISDDHNKADSTMQIAMARLEDEFRHILSSHTTPIEVDSLTDPSPSSRSMSTSGSAVFEDENDDEPDLQEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYQRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIRTAIDDDCFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDALTELIPDIDVIFESKSAEYIRIQATEIVSRLAEAVRGTLSEFENAVLREPSLHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPSIPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKYRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSSWLIPDSQLREELRISIIEKLIPAYRSFLGLHGHHIESGRHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH* 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 26573177 26575009 - CsaV3_3G030800.1 Csa03g02774 523679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa03g02774 610 Gene3D Exocyst complex component Exo70 14 125 - -
Csa03g02774 610 Gene3D Exocyst complex component Exo70 126 606 - -
Csa03g02774 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 609 - -
Csa03g02774 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 609 IPR004140 GO:0000145|GO:0006887
Csa03g02774 610 SUPERFAMILY Cullin repeat-like 23 597 IPR016159 -
Csa03g02774 610 MobiDBLite consensus disorder prediction 90 122 - -
Csa03g02774 610 Pfam Exo70 exocyst complex subunit 224 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Csa03g02774 610 MobiDBLite consensus disorder prediction 90 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g02774 Csa-Chr3:26573177 Csa05g02705 Csa-Chr5:27858578 1.51E-125 dispersed
Csa03g03213 Csa-Chr3:29599876 Csa03g02774 Csa-Chr3:26573177 1.95E-95 dispersed
Csa04g01453 Csa-Chr4:14408827 Csa03g02774 Csa-Chr3:26573177 7.38E-65 dispersed
Csa06g02723 Csa-Chr6:23826020 Csa03g02774 Csa-Chr3:26573177 1.74E-58 dispersed
Csa03g02774 Csa-Chr3:26573177 Csa06g01715 Csa-Chr6:15102299 3.21E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa03g02774 K07195 - csv:101204229 1183.7